RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
RAE1-209ENST00000527947 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
RAE1-209ENST00000527947 GLI3P10071 1580 aa17.11■□□□□ 0.33
RAE1-209ENST00000527947 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
RAE1-209ENST00000527947 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
RAE1-209ENST00000527947 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
RAE1-209ENST00000527947 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
RAE1-209ENST00000527947 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
RAE1-209ENST00000527947 VPS72Q15906 364 aa17.09■□□□□ 0.33
RAE1-209ENST00000527947 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
RAE1-209ENST00000527947 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
RAE1-209ENST00000527947 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
RAE1-209ENST00000527947 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
RAE1-209ENST00000527947 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
RAE1-209ENST00000527947 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
RAE1-209ENST00000527947 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
RAE1-209ENST00000527947 ACEP12821 1306 aa17.06■□□□□ 0.32
RAE1-209ENST00000527947 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
RAE1-209ENST00000527947 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
RAE1-209ENST00000527947 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
RAE1-209ENST00000527947 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
RAE1-209ENST00000527947 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
RAE1-209ENST00000527947 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
RAE1-209ENST00000527947 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
RAE1-209ENST00000527947 BTG4Q9NY30 223 aa17.02■□□□□ 0.32
RAE1-209ENST00000527947 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
RAE1-209ENST00000527947 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
RAE1-209ENST00000527947 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
RAE1-209ENST00000527947 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
RAE1-209ENST00000527947 SEPT12Q8IYM1 358 aa17.01■□□□□ 0.31
RAE1-209ENST00000527947 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
RAE1-209ENST00000527947 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
RAE1-209ENST00000527947 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
RAE1-209ENST00000527947 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
RAE1-209ENST00000527947 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
RAE1-209ENST00000527947 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
RAE1-209ENST00000527947 USP19O94966 1318 aa16.97■□□□□ 0.31
RAE1-209ENST00000527947 BLMP54132 1417 aaPredicted RBP16.97■□□□□ 0.31
RAE1-209ENST00000527947 ST20-MTHFSA0A0A6YYL1 179 aa16.96■□□□□ 0.31
RAE1-209ENST00000527947 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
RAE1-209ENST00000527947 CABP1Q9NZU7 370 aa16.96■□□□□ 0.31
RAE1-209ENST00000527947 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.31
RAE1-209ENST00000527947 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.31
RAE1-209ENST00000527947 TESK2Q96S53 571 aa16.96■□□□□ 0.3
RAE1-209ENST00000527947 USP6P35125 1406 aa16.95■□□□□ 0.3
RAE1-209ENST00000527947 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
RAE1-209ENST00000527947 CPDO75976 1380 aa16.95■□□□□ 0.3
RAE1-209ENST00000527947 USP47Q96K76 1375 aa16.95■□□□□ 0.3
RAE1-209ENST00000527947 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
RAE1-209ENST00000527947 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
RAE1-209ENST00000527947 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
RAE1-209ENST00000527947 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
RAE1-209ENST00000527947 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
RAE1-209ENST00000527947 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
RAE1-209ENST00000527947 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
RAE1-209ENST00000527947 A0A0G2JS52 829 aa16.92■□□□□ 0.3
RAE1-209ENST00000527947 MYT1Q01538 1121 aa16.92■□□□□ 0.3
RAE1-209ENST00000527947 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
RAE1-209ENST00000527947 EP400Q96L91 3159 aa16.91■□□□□ 0.3
RAE1-209ENST00000527947 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
RAE1-209ENST00000527947 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
RAE1-209ENST00000527947 GCP02774 474 aa16.9■□□□□ 0.3
RAE1-209ENST00000527947 SLIT3O75094 1523 aa16.9■□□□□ 0.3
RAE1-209ENST00000527947 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
RAE1-209ENST00000527947 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
RAE1-209ENST00000527947 TMF1P82094 1093 aa16.88■□□□□ 0.29
RAE1-209ENST00000527947 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
RAE1-209ENST00000527947 NLRP6P59044 892 aa16.87■□□□□ 0.29
RAE1-209ENST00000527947 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
RAE1-209ENST00000527947 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
RAE1-209ENST00000527947 EVA1CP58658 441 aa16.86■□□□□ 0.29
RAE1-209ENST00000527947 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
RAE1-209ENST00000527947 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
RAE1-209ENST00000527947 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
RAE1-209ENST00000527947 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 BARGINQ6ZT62 677 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 DEFB132Q7Z7B7 95 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 TTC21AQ8NDW8 1320 aa16.85■□□□□ 0.29
RAE1-209ENST00000527947 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
RAE1-209ENST00000527947 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
RAE1-209ENST00000527947 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
RAE1-209ENST00000527947 EIF4G2P78344 907 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAE1-209ENST00000527947 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
RAE1-209ENST00000527947 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
RAE1-209ENST00000527947 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
RAE1-209ENST00000527947 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
RAE1-209ENST00000527947 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
RAE1-209ENST00000527947 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
RAE1-209ENST00000527947 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
RAE1-209ENST00000527947 THRAP3Q9Y2W1 955 aaKnown RBP16.81■□□□□ 0.28
RAE1-209ENST00000527947 BAG6P46379 1132 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 CRB1P82279 1406 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
RAE1-209ENST00000527947 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
RAE1-209ENST00000527947 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms