RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 ANKLE2Q86XL3 938 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 TATDN2Q93075 761 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 CDC42BPBQ9Y5S2 1711 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 FAM161AQ3B820 660 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 NUDT18Q6ZVK8 323 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 THEMISQ8N1K5 641 aaPredicted RBP8.94□□□□□ -0.98
LINC01001-202ENST00000527683 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 PLA2R1Q13018 1463 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 TCOF1Q13428 1488 aaKnown RBP8.94□□□□□ -0.98
LINC01001-202ENST00000527683 MBD5Q9P267 1494 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 C3P01024 1663 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 KIDINS220Q9ULH0 1771 aa8.94□□□□□ -0.98
LINC01001-202ENST00000527683 TRIM26Q12899 539 aaPredicted RBP8.93□□□□□ -0.98
LINC01001-202ENST00000527683 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
LINC01001-202ENST00000527683 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
LINC01001-202ENST00000527683 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
LINC01001-202ENST00000527683 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
LINC01001-202ENST00000527683 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
LINC01001-202ENST00000527683 VPS8Q8N3P4 1428 aa8.93□□□□□ -0.98
LINC01001-202ENST00000527683 PLEKHH2Q8IVE3 1493 aa8.93□□□□□ -0.98
LINC01001-202ENST00000527683 SYCP2Q9BX26 1530 aa8.92□□□□□ -0.98
LINC01001-202ENST00000527683 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
LINC01001-202ENST00000527683 RTEL1-TNFRSF6BF6WH68 1400 aa8.92□□□□□ -0.98
LINC01001-202ENST00000527683 EYA1Q99502 592 aa8.92□□□□□ -0.98
LINC01001-202ENST00000527683 PNMA3Q9UL41 463 aa8.92□□□□□ -0.98
LINC01001-202ENST00000527683 TNRQ92752 1358 aa8.91□□□□□ -0.98
LINC01001-202ENST00000527683 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
LINC01001-202ENST00000527683 PREX2Q70Z35 1606 aa8.91□□□□□ -0.98
LINC01001-202ENST00000527683 MIA2Q96PC5 1412 aa8.9□□□□□ -0.98
LINC01001-202ENST00000527683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC01001-202ENST00000527683 TSPY4P0CV99 314 aa8.9□□□□□ -0.98
LINC01001-202ENST00000527683 TSPY10P0CW01 314 aa8.9□□□□□ -0.98
LINC01001-202ENST00000527683 ATP7AQ04656 1500 aa8.9□□□□□ -0.99
LINC01001-202ENST00000527683 A2ML1A8K2U0 1454 aa8.89□□□□□ -0.99
LINC01001-202ENST00000527683 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
LINC01001-202ENST00000527683 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
LINC01001-202ENST00000527683 LRRIQ1Q96JM4 1722 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 ITSN2Q9NZM3 1697 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 PCGF6Q9BYE7 350 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
LINC01001-202ENST00000527683 PLXNC1O60486 1568 aa8.87□□□□□ -0.99
LINC01001-202ENST00000527683 SPATA31D1Q6ZQQ2 1576 aa8.87□□□□□ -0.99
LINC01001-202ENST00000527683 ANKK1Q8NFD2 765 aa8.87□□□□□ -0.99
LINC01001-202ENST00000527683 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
LINC01001-202ENST00000527683 FCHSD2O94868 740 aa8.86□□□□□ -0.99
LINC01001-202ENST00000527683 CEP170BQ9Y4F5 1589 aaPredicted RBP8.86□□□□□ -0.99
LINC01001-202ENST00000527683 CDC42BPAQ5VT25 1732 aa8.85□□□□□ -0.99
LINC01001-202ENST00000527683 LTKP29376 864 aa8.85□□□□□ -0.99
LINC01001-202ENST00000527683 PZPP20742 1482 aa8.84□□□□□ -0.99
LINC01001-202ENST00000527683 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
LINC01001-202ENST00000527683 SUPT6HQ7KZ85 1726 aaKnown RBP8.84□□□□□ -0.99
LINC01001-202ENST00000527683 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
LINC01001-202ENST00000527683 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
LINC01001-202ENST00000527683 MROH2AA6NES4 1674 aa8.84□□□□□ -0.99
LINC01001-202ENST00000527683 INO80Q9ULG1 1556 aaPredicted RBP8.83□□□□□ -1
LINC01001-202ENST00000527683 HIC1Q14526 733 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
LINC01001-202ENST00000527683 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
LINC01001-202ENST00000527683 SMYD5Q6GMV2 418 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
LINC01001-202ENST00000527683 TXNDC2Q86VQ3 553 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 PHOX2BQ99453 314 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 CPS1P31327 1500 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 DNMT1P26358 1616 aaKnown RBP8.83□□□□□ -1
LINC01001-202ENST00000527683 MED14O60244 1454 aa8.83□□□□□ -1
LINC01001-202ENST00000527683 CLTCQ00610 1675 aaKnown RBP8.82□□□□□ -1
LINC01001-202ENST00000527683 GNPATO15228 680 aa8.82□□□□□ -1
LINC01001-202ENST00000527683 LRCH3Q96II8 777 aa8.82□□□□□ -1
LINC01001-202ENST00000527683 NLRP1Q9C000 1473 aa8.82□□□□□ -1
LINC01001-202ENST00000527683 MAP3K1Q13233 1512 aa8.81□□□□□ -1
LINC01001-202ENST00000527683 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
LINC01001-202ENST00000527683 NCOA2Q15596 1464 aa8.81□□□□□ -1
LINC01001-202ENST00000527683 CCDC141Q6ZP82 1450 aa8.81□□□□□ -1
LINC01001-202ENST00000527683 FAM135AQ9P2D6 1515 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 MYO3AQ8NEV4 1616 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 RCCD1A6NED2 376 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 GPIHBP1Q8IV16 184 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 NLRP7Q8WX94 980 aa8.8□□□□□ -1
LINC01001-202ENST00000527683 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
LINC01001-202ENST00000527683 TIAM1Q13009 1591 aa8.79□□□□□ -1
LINC01001-202ENST00000527683 NEURL4Q96JN8 1562 aa8.79□□□□□ -1
LINC01001-202ENST00000527683 LRRC7Q96NW7 1537 aa8.79□□□□□ -1
LINC01001-202ENST00000527683 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 IDI1Q13907 227 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
LINC01001-202ENST00000527683 RRP7BPQ9NSQ0 103 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 EID1Q9Y6B2 187 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 KDM5DQ9BY66 1539 aa8.78□□□□□ -1
LINC01001-202ENST00000527683 ZNF142P52746 1687 aaPredicted RBP8.78□□□□□ -1
LINC01001-202ENST00000527683 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1
LINC01001-202ENST00000527683 ALKQ9UM73 1620 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms