RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 MBD5Q9P267 1494 aa8.22□□□□□ -1.09
RDX-203ENST00000527537 RIOK3O14730 519 aaKnown RBP8.22□□□□□ -1.09
RDX-203ENST00000527537 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
RDX-203ENST00000527537 LRSAM1Q6UWE0 723 aa8.22□□□□□ -1.09
RDX-203ENST00000527537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.09
RDX-203ENST00000527537 JPH4Q96JJ6 628 aa8.22□□□□□ -1.09
RDX-203ENST00000527537 DIAPH3Q9NSV4 1193 aa8.22□□□□□ -1.09
RDX-203ENST00000527537 ERICH4A6NGS2 130 aa8.21□□□□□ -1.09
RDX-203ENST00000527537 HNRNPMP52272 730 aaKnown RBP eCLIP8.21□□□□□ -1.09
RDX-203ENST00000527537 CC2D1BQ5T0F9 858 aaKnown RBP8.21□□□□□ -1.09
RDX-203ENST00000527537 ANKRD50Q9ULJ7 1429 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 EIF4G3O43432 1585 aaKnown RBP8.21□□□□□ -1.1
RDX-203ENST00000527537 ERCC6Q03468 1493 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 TSPY4P0CV99 314 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 TSPY10P0CW01 314 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 TNNT3P45378 269 aaPredicted RBP8.21□□□□□ -1.1
RDX-203ENST00000527537 MLECQ14165 292 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 TRMT2AQ8IZ69 625 aaKnown RBP8.21□□□□□ -1.1
RDX-203ENST00000527537 LMBRD1Q9NUN5 540 aa8.21□□□□□ -1.1
RDX-203ENST00000527537 ST20-MTHFSA0A0A6YYL1 179 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 MCTP1Q6DN14 999 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 FOXD4L1Q9NU39 408 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 NCBP1Q09161 790 aaKnown RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 CHAF1AQ13111 956 aaPredicted RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 C17orf53Q8N3J3 647 aaPredicted RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
RDX-203ENST00000527537 NKTRP30414 1462 aaKnown RBP8.2□□□□□ -1.1
RDX-203ENST00000527537 RGL3Q3MIN7 710 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 RSPH14Q9UHP6 348 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 SYCP1Q15431 976 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 CARD10Q9BWT7 1032 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
RDX-203ENST00000527537 RAD51AP2Q09MP3 1159 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 CREBRFQ8IUR6 639 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 KRT222Q8N1A0 295 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.19□□□□□ -1.11e-6■■■□□ 18.4
RDX-203ENST00000527537 RBM27Q9P2N5 1060 aaKnown RBP8.19□□□□□ -1.1
RDX-203ENST00000527537 PCDHB15Q9Y5E8 787 aa8.19□□□□□ -1.1
RDX-203ENST00000527537 CARMIL2Q6F5E8 1435 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 SYCE3A1L190 88 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 GTF2A1P52655 376 aaPredicted RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 RNF214Q8ND24 703 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 KIF18AQ8NI77 898 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 GPT2Q8TD30 523 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 MYCBPQ99417 103 aaPredicted RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 HNRNPH2P55795 449 aaKnown RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 LMOD3Q0VAK6 560 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 SPINK5Q9NQ38 1064 aaPredicted RBP8.18□□□□□ -1.1
RDX-203ENST00000527537 ITSN2Q9NZM3 1697 aa8.18□□□□□ -1.1
RDX-203ENST00000527537 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
RDX-203ENST00000527537 C9orf84Q5VXU9 1444 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 DHX16O60231 1041 aaKnown RBP8.17□□□□□ -1.1
RDX-203ENST00000527537 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
RDX-203ENST00000527537 NCAPGQ9BPX3 1015 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
RDX-203ENST00000527537 ADGBQ8N7X0 1667 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 EP400NLQ6ZTU2 488 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 GAS2L2Q8NHY3 880 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 RWDD1Q9H446 243 aaPredicted RBP8.17□□□□□ -1.1
RDX-203ENST00000527537 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 CLASP1Q7Z460 1538 aa8.17□□□□□ -1.1
RDX-203ENST00000527537 GRIPAP1Q4V328 841 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 CTR9Q6PD62 1173 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 MPNDQ8N594 471 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 KIF2CQ99661 725 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 SMC4Q9NTJ3 1288 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 CYP2C19P33261 490 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 PRPF40AO75400 957 aaKnown RBP8.16□□□□□ -1.1
RDX-203ENST00000527537 CT47A1Q5JQC4 288 aaPredicted RBP8.16□□□□□ -1.1
RDX-203ENST00000527537 ICE2Q659A1 982 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 FAM53CQ9NYF3 392 aa8.16□□□□□ -1.1
RDX-203ENST00000527537 SYNJ2O15056 1496 aa8.15□□□□□ -1.1
RDX-203ENST00000527537 RALGAPBQ86X10 1494 aa8.15□□□□□ -1.1
RDX-203ENST00000527537 NUCB2P80303 420 aa8.15□□□□□ -1.1
RDX-203ENST00000527537 ADGRL2O95490 1459 aa8.15□□□□□ -1.11
RDX-203ENST00000527537 CYP2E1P05181 493 aaPredicted RBP8.15□□□□□ -1.11
RDX-203ENST00000527537 KIAA1524Q8TCG1 905 aa8.15□□□□□ -1.11
RDX-203ENST00000527537 CEP83Q9Y592 693 aa8.15□□□□□ -1.11
RDX-203ENST00000527537 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 MAGI1Q96QZ7 1491 aaPredicted RBP8.14□□□□□ -1.11
RDX-203ENST00000527537 SHROOM2Q13796 1616 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 TSPY26PQ9H489 355 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 CROCC2H7BZ55 1655 aa8.14□□□□□ -1.11
RDX-203ENST00000527537 ATP10BO94823 1461 aa8.13□□□□□ -1.11
RDX-203ENST00000527537 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms