RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 NBPF8Q3BBV2 869 aa19.22■□□□□ 0.67
CAPN1-207ENST00000527189 ACEP12821 1306 aa19.22■□□□□ 0.67
CAPN1-207ENST00000527189 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
CAPN1-207ENST00000527189 NWD2Q9ULI1 1742 aa19.21■□□□□ 0.67
CAPN1-207ENST00000527189 RALGAPBQ86X10 1494 aa19.21■□□□□ 0.67
CAPN1-207ENST00000527189 ONECUT3O60422 494 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-207ENST00000527189 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
CAPN1-207ENST00000527189 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
CAPN1-207ENST00000527189 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
CAPN1-207ENST00000527189 BRWD3Q6RI45 1802 aa19.17■□□□□ 0.66
CAPN1-207ENST00000527189 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-207ENST00000527189 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
CAPN1-207ENST00000527189 GLI3P10071 1580 aa19.17■□□□□ 0.66
CAPN1-207ENST00000527189 TOPAZ1Q8N9V7 1692 aa19.17■□□□□ 0.66
CAPN1-207ENST00000527189 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-207ENST00000527189 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
CAPN1-207ENST00000527189 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
CAPN1-207ENST00000527189 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
CAPN1-207ENST00000527189 TRPM1Q7Z4N2 1603 aa19.15■□□□□ 0.66
CAPN1-207ENST00000527189 PLCH1Q4KWH8 1693 aa19.15■□□□□ 0.66
CAPN1-207ENST00000527189 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
CAPN1-207ENST00000527189 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.66
CAPN1-207ENST00000527189 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
CAPN1-207ENST00000527189 PRDM11Q9NQV5 511 aa19.14■□□□□ 0.65
CAPN1-207ENST00000527189 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
CAPN1-207ENST00000527189 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
CAPN1-207ENST00000527189 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
CAPN1-207ENST00000527189 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
CAPN1-207ENST00000527189 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
CAPN1-207ENST00000527189 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CAPN1-207ENST00000527189 BLMP54132 1417 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-207ENST00000527189 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
CAPN1-207ENST00000527189 NUTM2GQ5VZR2 741 aa19.09■□□□□ 0.65
CAPN1-207ENST00000527189 DEFB132Q7Z7B7 95 aa19.09■□□□□ 0.65
CAPN1-207ENST00000527189 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-207ENST00000527189 TONSLQ96HA7 1378 aa19.08■□□□□ 0.65
CAPN1-207ENST00000527189 USP19O94966 1318 aa19.08■□□□□ 0.65
CAPN1-207ENST00000527189 SPATA31A5Q5VU36 1347 aa19.08■□□□□ 0.65
CAPN1-207ENST00000527189 SPATA31A7Q8IWB4 1347 aa19.08■□□□□ 0.65
CAPN1-207ENST00000527189 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
CAPN1-207ENST00000527189 NRAPQ86VF7 1730 aa19.08■□□□□ 0.64
CAPN1-207ENST00000527189 ZC3H6P61129 1189 aaKnown RBP19.07■□□□□ 0.64
CAPN1-207ENST00000527189 CARD11Q9BXL7 1154 aa19.07■□□□□ 0.64
CAPN1-207ENST00000527189 CPDO75976 1380 aa19.06■□□□□ 0.64
CAPN1-207ENST00000527189 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
CAPN1-207ENST00000527189 GCP02774 474 aa19.06■□□□□ 0.64
CAPN1-207ENST00000527189 FAM98CQ17RN3 349 aaKnown RBP19.06■□□□□ 0.64
CAPN1-207ENST00000527189 USP6P35125 1406 aa19.06■□□□□ 0.64
CAPN1-207ENST00000527189 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
CAPN1-207ENST00000527189 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
CAPN1-207ENST00000527189 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
CAPN1-207ENST00000527189 A0A0G2JS52 829 aa19.03■□□□□ 0.64
CAPN1-207ENST00000527189 EVA1CP58658 441 aa19.03■□□□□ 0.64
CAPN1-207ENST00000527189 NLRP6P59044 892 aa19.03■□□□□ 0.64
CAPN1-207ENST00000527189 MYT1Q01538 1121 aa19.03■□□□□ 0.64
CAPN1-207ENST00000527189 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.64
CAPN1-207ENST00000527189 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
CAPN1-207ENST00000527189 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
CAPN1-207ENST00000527189 SLC24A1O60721 1099 aa19■□□□□ 0.63
CAPN1-207ENST00000527189 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
CAPN1-207ENST00000527189 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
CAPN1-207ENST00000527189 PSDA5PKW4 1024 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-207ENST00000527189 BARGINQ6ZT62 677 aa18.99■□□□□ 0.63
CAPN1-207ENST00000527189 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
CAPN1-207ENST00000527189 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
CAPN1-207ENST00000527189 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
CAPN1-207ENST00000527189 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
CAPN1-207ENST00000527189 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
CAPN1-207ENST00000527189 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
CAPN1-207ENST00000527189 SLIT3O75094 1523 aa18.95■□□□□ 0.62
CAPN1-207ENST00000527189 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
CAPN1-207ENST00000527189 LARP1Q6PKG0 1096 aaKnown RBP18.95■□□□□ 0.62
CAPN1-207ENST00000527189 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
CAPN1-207ENST00000527189 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
CAPN1-207ENST00000527189 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
CAPN1-207ENST00000527189 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
CAPN1-207ENST00000527189 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
CAPN1-207ENST00000527189 AKAP12Q02952 1782 aa18.93■□□□□ 0.62
CAPN1-207ENST00000527189 BAG6P46379 1132 aa18.92■□□□□ 0.62
CAPN1-207ENST00000527189 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
CAPN1-207ENST00000527189 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
CAPN1-207ENST00000527189 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-207ENST00000527189 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-207ENST00000527189 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
CAPN1-207ENST00000527189 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
CAPN1-207ENST00000527189 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
CAPN1-207ENST00000527189 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
CAPN1-207ENST00000527189 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
CAPN1-207ENST00000527189 CRB1P82279 1406 aa18.9■□□□□ 0.62
CAPN1-207ENST00000527189 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
CAPN1-207ENST00000527189 TESK2Q96S53 571 aa18.89■□□□□ 0.61
CAPN1-207ENST00000527189 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.61
CAPN1-207ENST00000527189 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
CAPN1-207ENST00000527189 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
CAPN1-207ENST00000527189 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-207ENST00000527189 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
CAPN1-207ENST00000527189 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
CAPN1-207ENST00000527189 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
CAPN1-207ENST00000527189 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
CAPN1-207ENST00000527189 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms