RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 NGLY1Q96IV0 654 aa20.24■□□□□ 0.83
NXF1-204ENST00000527064 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
NXF1-204ENST00000527064 TESK2Q96S53 571 aa20.24■□□□□ 0.83
NXF1-204ENST00000527064 USP6P35125 1406 aa20.23■□□□□ 0.83
NXF1-204ENST00000527064 POTEAQ6S8J7 498 aa20.21■□□□□ 0.83
NXF1-204ENST00000527064 ZNF692Q9BU19 519 aaPredicted RBP20.21■□□□□ 0.83
NXF1-204ENST00000527064 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
NXF1-204ENST00000527064 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
NXF1-204ENST00000527064 TMF1P82094 1093 aa20.2■□□□□ 0.82
NXF1-204ENST00000527064 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
NXF1-204ENST00000527064 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
NXF1-204ENST00000527064 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
NXF1-204ENST00000527064 FNBP4Q8N3X1 1017 aaPredicted RBP20.19■□□□□ 0.82
NXF1-204ENST00000527064 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
NXF1-204ENST00000527064 USP21Q9UK80 565 aa20.18■□□□□ 0.82
NXF1-204ENST00000527064 CPSF1Q10570 1443 aaKnown RBP20.18■□□□□ 0.82
NXF1-204ENST00000527064 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
NXF1-204ENST00000527064 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
NXF1-204ENST00000527064 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
NXF1-204ENST00000527064 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
NXF1-204ENST00000527064 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
NXF1-204ENST00000527064 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
NXF1-204ENST00000527064 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
NXF1-204ENST00000527064 HDGFL2Q7Z4V5 671 aaPredicted RBP20.15■□□□□ 0.82
NXF1-204ENST00000527064 SLIT2O94813 1529 aa20.15■□□□□ 0.82
NXF1-204ENST00000527064 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.15■□□□□ 0.82
NXF1-204ENST00000527064 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
NXF1-204ENST00000527064 EIF4G2P78344 907 aaKnown RBP eCLIP20.14■□□□□ 0.81
NXF1-204ENST00000527064 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
NXF1-204ENST00000527064 TERF2IPQ9NYB0 399 aa20.14■□□□□ 0.81
NXF1-204ENST00000527064 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
NXF1-204ENST00000527064 NWD2Q9ULI1 1742 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 PLCH1Q4KWH8 1693 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 BCL9LQ86UU0 1499 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 USP19O94966 1318 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 RXRBP28702 533 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 NUTM2GQ5VZR2 741 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 QTRT2Q9H974 415 aaKnown RBP20.13■□□□□ 0.81
NXF1-204ENST00000527064 COL14A1Q05707 1796 aaKnown RBP20.13■□□□□ 0.81
NXF1-204ENST00000527064 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
NXF1-204ENST00000527064 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
NXF1-204ENST00000527064 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
NXF1-204ENST00000527064 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
NXF1-204ENST00000527064 ATRNO75882 1429 aa20.11■□□□□ 0.81
NXF1-204ENST00000527064 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
NXF1-204ENST00000527064 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
NXF1-204ENST00000527064 SOCS7O14512 581 aa20.1■□□□□ 0.81
NXF1-204ENST00000527064 RBM6P78332 1123 aaKnown RBP20.1■□□□□ 0.81
NXF1-204ENST00000527064 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
NXF1-204ENST00000527064 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
NXF1-204ENST00000527064 NLRP6P59044 892 aa20.09■□□□□ 0.81
NXF1-204ENST00000527064 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
NXF1-204ENST00000527064 SLIT3O75094 1523 aa20.08■□□□□ 0.81
NXF1-204ENST00000527064 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
NXF1-204ENST00000527064 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.8
NXF1-204ENST00000527064 KIAA0232Q92628 1395 aa20.08■□□□□ 0.8
NXF1-204ENST00000527064 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
NXF1-204ENST00000527064 CPDO75976 1380 aa20.07■□□□□ 0.8
NXF1-204ENST00000527064 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
NXF1-204ENST00000527064 GCP02774 474 aa20.05■□□□□ 0.8
NXF1-204ENST00000527064 USP54Q70EL1 1684 aa20.04■□□□□ 0.8
NXF1-204ENST00000527064 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
NXF1-204ENST00000527064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
NXF1-204ENST00000527064 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
NXF1-204ENST00000527064 VPS72Q15906 364 aa20.03■□□□□ 0.8
NXF1-204ENST00000527064 KCNH5Q8NCM2 988 aa20.03■□□□□ 0.8
NXF1-204ENST00000527064 USP31Q70CQ4 1352 aa20.03■□□□□ 0.8
NXF1-204ENST00000527064 MYOM1P52179 1685 aa20.03■□□□□ 0.8
NXF1-204ENST00000527064 RGS12O14924 1447 aa20.02■□□□□ 0.8
NXF1-204ENST00000527064 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
NXF1-204ENST00000527064 CHRNA2Q15822 529 aa20■□□□□ 0.79
NXF1-204ENST00000527064 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
NXF1-204ENST00000527064 NME9Q86XW9 330 aa19.99■□□□□ 0.79
NXF1-204ENST00000527064 LMO7Q8WWI1 1683 aa19.99■□□□□ 0.79
NXF1-204ENST00000527064 GLI3P10071 1580 aa19.99■□□□□ 0.79
NXF1-204ENST00000527064 NFAT5O94916 1531 aa19.98■□□□□ 0.79
NXF1-204ENST00000527064 OVOS2A0A0J9YW53 1432 aa19.97■□□□□ 0.79
NXF1-204ENST00000527064 OVOS2Q6IE36 1432 aa19.97■□□□□ 0.79
NXF1-204ENST00000527064 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
NXF1-204ENST00000527064 ABCC6O95255 1503 aa19.97■□□□□ 0.79
NXF1-204ENST00000527064 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
NXF1-204ENST00000527064 ZBTB7CA1YPR0 619 aa19.95■□□□□ 0.78
NXF1-204ENST00000527064 CAMTA1Q9Y6Y1 1673 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 SOX12O15370 315 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 EVA1CP58658 441 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 COG3Q96JB2 828 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 STRN4Q9NRL3 753 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 ZRANB1Q9UGI0 708 aa19.94■□□□□ 0.78
NXF1-204ENST00000527064 COL5A2P05997 1499 aaPredicted RBP19.93■□□□□ 0.78
NXF1-204ENST00000527064 ARHGEF25Q86VW2 580 aa19.93■□□□□ 0.78
NXF1-204ENST00000527064 SPATA31A5Q5VU36 1347 aa19.93■□□□□ 0.78
NXF1-204ENST00000527064 SPATA31A7Q8IWB4 1347 aa19.93■□□□□ 0.78
NXF1-204ENST00000527064 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
NXF1-204ENST00000527064 NSD3Q9BZ95 1437 aa19.92■□□□□ 0.78
NXF1-204ENST00000527064 COL18A1P39060 1754 aa19.9■□□□□ 0.78
NXF1-204ENST00000527064 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
NXF1-204ENST00000527064 SPATA31A1Q5TZJ5 1347 aa19.89■□□□□ 0.77
NXF1-204ENST00000527064 LTN1O94822 1766 aa19.88■□□□□ 0.77
NXF1-204ENST00000527064 CRB1P82279 1406 aa19.87■□□□□ 0.77
NXF1-204ENST00000527064 CGNL1Q0VF96 1302 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms