RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
FDFT1-211ENST00000527045 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
FDFT1-211ENST00000527045 NUP155O75694 1391 aa13.42□□□□□ -0.26
FDFT1-211ENST00000527045 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
FDFT1-211ENST00000527045 KIF1BO60333 1816 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 THSD7AQ9UPZ6 1657 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
FDFT1-211ENST00000527045 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
FDFT1-211ENST00000527045 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
FDFT1-211ENST00000527045 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
FDFT1-211ENST00000527045 ZBTB22O15209 634 aa13.38□□□□□ -0.27
FDFT1-211ENST00000527045 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
FDFT1-211ENST00000527045 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
FDFT1-211ENST00000527045 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
FDFT1-211ENST00000527045 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
FDFT1-211ENST00000527045 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
FDFT1-211ENST00000527045 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
FDFT1-211ENST00000527045 COL14A1Q05707 1796 aaKnown RBP13.36□□□□□ -0.27
FDFT1-211ENST00000527045 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
FDFT1-211ENST00000527045 PSME1Q06323 249 aa13.36□□□□□ -0.27
FDFT1-211ENST00000527045 MYOM1P52179 1685 aa13.35□□□□□ -0.27
FDFT1-211ENST00000527045 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
FDFT1-211ENST00000527045 STK26Q9P289 416 aa13.34□□□□□ -0.27
FDFT1-211ENST00000527045 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
FDFT1-211ENST00000527045 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
FDFT1-211ENST00000527045 IFT172Q9UG01 1749 aa13.33□□□□□ -0.28
FDFT1-211ENST00000527045 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
FDFT1-211ENST00000527045 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
FDFT1-211ENST00000527045 PPLO60437 1756 aa13.32□□□□□ -0.28
FDFT1-211ENST00000527045 CASZ1Q86V15 1759 aa13.32□□□□□ -0.28
FDFT1-211ENST00000527045 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
FDFT1-211ENST00000527045 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
FDFT1-211ENST00000527045 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
FDFT1-211ENST00000527045 SLC34A2O95436 690 aa13.29□□□□□ -0.28
FDFT1-211ENST00000527045 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
FDFT1-211ENST00000527045 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
FDFT1-211ENST00000527045 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
FDFT1-211ENST00000527045 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
FDFT1-211ENST00000527045 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
FDFT1-211ENST00000527045 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
FDFT1-211ENST00000527045 PDE3BQ13370 1112 aa13.27□□□□□ -0.29
FDFT1-211ENST00000527045 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
FDFT1-211ENST00000527045 FHDC1Q9C0D6 1143 aaPredicted RBP13.27□□□□□ -0.29
FDFT1-211ENST00000527045 ROCK1Q13464 1354 aa13.27□□□□□ -0.29
FDFT1-211ENST00000527045 TECPR2O15040 1411 aa13.27□□□□□ -0.29
FDFT1-211ENST00000527045 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
FDFT1-211ENST00000527045 ALS2Q96Q42 1657 aa13.26□□□□□ -0.29
FDFT1-211ENST00000527045 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
FDFT1-211ENST00000527045 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
FDFT1-211ENST00000527045 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
FDFT1-211ENST00000527045 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
FDFT1-211ENST00000527045 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
FDFT1-211ENST00000527045 PTGER2P43116 358 aa13.25□□□□□ -0.29
FDFT1-211ENST00000527045 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
FDFT1-211ENST00000527045 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
FDFT1-211ENST00000527045 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
FDFT1-211ENST00000527045 TMEM132EQ6IEE7 984 aa13.24□□□□□ -0.29
FDFT1-211ENST00000527045 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
FDFT1-211ENST00000527045 ABCC11Q96J66 1382 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 ITGAEP38570 1179 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
FDFT1-211ENST00000527045 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
FDFT1-211ENST00000527045 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
FDFT1-211ENST00000527045 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
FDFT1-211ENST00000527045 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
FDFT1-211ENST00000527045 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
FDFT1-211ENST00000527045 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
FDFT1-211ENST00000527045 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
FDFT1-211ENST00000527045 GPR162Q16538 588 aa13.18□□□□□ -0.3
FDFT1-211ENST00000527045 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
FDFT1-211ENST00000527045 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
FDFT1-211ENST00000527045 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
FDFT1-211ENST00000527045 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
FDFT1-211ENST00000527045 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
FDFT1-211ENST00000527045 PLSCR1O15162 318 aa13.16□□□□□ -0.3
FDFT1-211ENST00000527045 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
FDFT1-211ENST00000527045 HSPA6P17066 643 aa13.16□□□□□ -0.3
FDFT1-211ENST00000527045 EVA1CP58658 441 aa13.16□□□□□ -0.3
FDFT1-211ENST00000527045 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
FDFT1-211ENST00000527045 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
FDFT1-211ENST00000527045 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
FDFT1-211ENST00000527045 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
FDFT1-211ENST00000527045 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.3
FDFT1-211ENST00000527045 PTF1AQ7RTS3 328 aa13.15□□□□□ -0.3
FDFT1-211ENST00000527045 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
FDFT1-211ENST00000527045 PROM2Q8N271 834 aa13.14□□□□□ -0.31
FDFT1-211ENST00000527045 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
FDFT1-211ENST00000527045 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
FDFT1-211ENST00000527045 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
FDFT1-211ENST00000527045 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
FDFT1-211ENST00000527045 PRELPP51888 382 aa13.13□□□□□ -0.31
FDFT1-211ENST00000527045 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
FDFT1-211ENST00000527045 ARXQ96QS3 562 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms