RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 HRCP23327 699 aa27.51■■□□□ 1.99
CAPN1-206ENST00000526966 KRT27Q7Z3Y8 459 aa27.51■■□□□ 1.99
CAPN1-206ENST00000526966 DEFB132Q7Z7B7 95 aa27.5■■□□□ 1.99
CAPN1-206ENST00000526966 BTG4Q9NY30 223 aa27.48■■□□□ 1.99
CAPN1-206ENST00000526966 KIAA1210Q9ULL0 1709 aa27.47■■□□□ 1.99
CAPN1-206ENST00000526966 TOPAZ1Q8N9V7 1692 aa27.46■■□□□ 1.99
CAPN1-206ENST00000526966 PHRF1Q9P1Y6 1649 aaKnown RBP27.46■■□□□ 1.99
CAPN1-206ENST00000526966 SF3B2Q13435 895 aaKnown RBP27.46■■□□□ 1.99
CAPN1-206ENST00000526966 THSD7AQ9UPZ6 1657 aa27.46■■□□□ 1.99
CAPN1-206ENST00000526966 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.98
CAPN1-206ENST00000526966 FAM98CQ17RN3 349 aaKnown RBP27.43■■□□□ 1.98
CAPN1-206ENST00000526966 RGPD1P0DJD0 1748 aa27.42■■□□□ 1.98
CAPN1-206ENST00000526966 SPATA31A5Q5VU36 1347 aa27.41■■□□□ 1.98
CAPN1-206ENST00000526966 SPATA31A7Q8IWB4 1347 aa27.41■■□□□ 1.98
CAPN1-206ENST00000526966 A0A0G2JS52 829 aa27.4■■□□□ 1.98
CAPN1-206ENST00000526966 MYT1Q01538 1121 aa27.4■■□□□ 1.98
CAPN1-206ENST00000526966 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
CAPN1-206ENST00000526966 LRP5O75197 1615 aa27.4■■□□□ 1.98
CAPN1-206ENST00000526966 PAK3O75914 559 aaPredicted RBP27.39■■□□□ 1.98
CAPN1-206ENST00000526966 POLR3AO14802 1390 aaPredicted RBP27.37■■□□□ 1.97
CAPN1-206ENST00000526966 PRDM11Q9NQV5 511 aa27.37■■□□□ 1.97
CAPN1-206ENST00000526966 TNS1Q9HBL0 1735 aaKnown RBP27.36■■□□□ 1.97
CAPN1-206ENST00000526966 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
CAPN1-206ENST00000526966 BAG6P46379 1132 aa27.35■■□□□ 1.97
CAPN1-206ENST00000526966 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
CAPN1-206ENST00000526966 NRKQ7Z2Y5 1582 aa27.33■■□□□ 1.97
CAPN1-206ENST00000526966 DISP2A7MBM2 1401 aa27.32■■□□□ 1.96
CAPN1-206ENST00000526966 SPATA31A1Q5TZJ5 1347 aa27.31■■□□□ 1.96
CAPN1-206ENST00000526966 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
CAPN1-206ENST00000526966 ACEP12821 1306 aa27.3■■□□□ 1.96
CAPN1-206ENST00000526966 PLEKHG3A1L390 1219 aa27.29■■□□□ 1.96
CAPN1-206ENST00000526966 LMO7Q8WWI1 1683 aa27.28■■□□□ 1.96
CAPN1-206ENST00000526966 CHRNA2Q15822 529 aa27.28■■□□□ 1.96
CAPN1-206ENST00000526966 NBPF8Q3BBV2 869 aa27.28■■□□□ 1.96
CAPN1-206ENST00000526966 FAM182BQ5T319 152 aa27.28■■□□□ 1.96
CAPN1-206ENST00000526966 ZC3H6P61129 1189 aaKnown RBP27.25■■□□□ 1.95
CAPN1-206ENST00000526966 NBPF1Q3BBV0 1214 aa27.25■■□□□ 1.95
CAPN1-206ENST00000526966 USP19O94966 1318 aa27.24■■□□□ 1.95
CAPN1-206ENST00000526966 EN1Q05925 392 aaPredicted RBP27.24■■□□□ 1.95
CAPN1-206ENST00000526966 NUTM2GQ5VZR2 741 aa27.24■■□□□ 1.95
CAPN1-206ENST00000526966 SSH2Q76I76 1423 aa27.24■■□□□ 1.95
CAPN1-206ENST00000526966 CAMTA1Q9Y6Y1 1673 aa27.24■■□□□ 1.95
CAPN1-206ENST00000526966 CPDO75976 1380 aa27.23■■□□□ 1.95
CAPN1-206ENST00000526966 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
CAPN1-206ENST00000526966 QRICH2Q9H0J4 1663 aa27.23■■□□□ 1.95
CAPN1-206ENST00000526966 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
CAPN1-206ENST00000526966 PPIP5K1Q6PFW1 1433 aa27.2■■□□□ 1.94
CAPN1-206ENST00000526966 BARGINQ6ZT62 677 aa27.19■■□□□ 1.94
CAPN1-206ENST00000526966 ABTB2Q8N961 1025 aa27.19■■□□□ 1.94
CAPN1-206ENST00000526966 CENPJQ9HC77 1338 aaPredicted RBP27.18■■□□□ 1.94
CAPN1-206ENST00000526966 FAM196AQ6ZSG2 479 aa27.17■■□□□ 1.94
CAPN1-206ENST00000526966 BRD4O60885 1362 aaPredicted RBP27.17■■□□□ 1.94
CAPN1-206ENST00000526966 RREB1Q92766 1687 aa27.16■■□□□ 1.94
CAPN1-206ENST00000526966 SRPK2P78362 688 aaKnown RBP27.15■■□□□ 1.94
CAPN1-206ENST00000526966 PARP4Q9UKK3 1724 aaKnown RBP27.15■■□□□ 1.94
CAPN1-206ENST00000526966 EVA1CP58658 441 aa27.14■■□□□ 1.94
CAPN1-206ENST00000526966 EZH2Q15910 746 aaKnown RBP27.14■■□□□ 1.94
CAPN1-206ENST00000526966 USP35Q9P2H5 1018 aa27.14■■□□□ 1.94
CAPN1-206ENST00000526966 PARD3Q8TEW0 1356 aa27.13■■□□□ 1.93
CAPN1-206ENST00000526966 TRIM37O94972 964 aa27.13■■□□□ 1.93
CAPN1-206ENST00000526966 LARP1Q6PKG0 1096 aaKnown RBP27.13■■□□□ 1.93
CAPN1-206ENST00000526966 NLRP13Q86W25 1043 aa27.13■■□□□ 1.93
CAPN1-206ENST00000526966 CAMKK2Q96RR4 588 aa27.13■■□□□ 1.93
CAPN1-206ENST00000526966 COL5A2P05997 1499 aaPredicted RBP27.13■■□□□ 1.93
CAPN1-206ENST00000526966 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
CAPN1-206ENST00000526966 USP6P35125 1406 aa27.12■■□□□ 1.93
CAPN1-206ENST00000526966 SLIT3O75094 1523 aa27.11■■□□□ 1.93
CAPN1-206ENST00000526966 GCP02774 474 aa27.11■■□□□ 1.93
CAPN1-206ENST00000526966 R3HDM1Q15032 1099 aaKnown RBP27.11■■□□□ 1.93
CAPN1-206ENST00000526966 TCP11L2Q8N4U5 519 aa27.11■■□□□ 1.93
CAPN1-206ENST00000526966 TRPM1Q7Z4N2 1603 aa27.11■■□□□ 1.93
CAPN1-206ENST00000526966 NUP188Q5SRE5 1749 aa27.1■■□□□ 1.93
CAPN1-206ENST00000526966 THRAP3Q9Y2W1 955 aaKnown RBP27.09■■□□□ 1.93
CAPN1-206ENST00000526966 PIK3C2AO00443 1686 aa27.08■■□□□ 1.93
CAPN1-206ENST00000526966 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
CAPN1-206ENST00000526966 COL18A1P39060 1754 aa27.07■■□□□ 1.92
CAPN1-206ENST00000526966 APBA3O96018 575 aa27.06■■□□□ 1.92
CAPN1-206ENST00000526966 CRB1P82279 1406 aa27.06■■□□□ 1.92
CAPN1-206ENST00000526966 PEAK1Q9H792 1746 aa27.05■■□□□ 1.92
CAPN1-206ENST00000526966 CABP1Q9NZU7 370 aa27.05■■□□□ 1.92
CAPN1-206ENST00000526966 WNK3Q9BYP7 1800 aa27.04■■□□□ 1.92
CAPN1-206ENST00000526966 AATKQ6ZMQ8 1374 aa27.04■■□□□ 1.92
CAPN1-206ENST00000526966 AKAP12Q02952 1782 aa27.04■■□□□ 1.92
CAPN1-206ENST00000526966 LRRC37A3O60309 1634 aa27.03■■□□□ 1.92
CAPN1-206ENST00000526966 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
CAPN1-206ENST00000526966 SBF2Q86WG5 1849 aa27.02■■□□□ 1.92
CAPN1-206ENST00000526966 NLRP6P59044 892 aa27.01■■□□□ 1.91
CAPN1-206ENST00000526966 RGPD3A6NKT7 1758 aaPredicted RBP27.01■■□□□ 1.91
CAPN1-206ENST00000526966 RGPD4Q7Z3J3 1758 aa27.01■■□□□ 1.91
CAPN1-206ENST00000526966 EVC2Q86UK5 1308 aa26.99■■□□□ 1.91
CAPN1-206ENST00000526966 OVOS2A0A0G2JMS6 1433 aa26.98■■□□□ 1.91
CAPN1-206ENST00000526966 OVOS2A0A0J9YW53 1432 aa26.98■■□□□ 1.91
CAPN1-206ENST00000526966 OVOS2Q6IE36 1432 aa26.98■■□□□ 1.91
CAPN1-206ENST00000526966 C11orf95C9JLR9 678 aaPredicted RBP26.97■■□□□ 1.91
CAPN1-206ENST00000526966 RGPD5Q99666 1765 aa26.97■■□□□ 1.91
CAPN1-206ENST00000526966 CPSF1Q10570 1443 aaKnown RBP26.95■■□□□ 1.9
CAPN1-206ENST00000526966 ZBTB7CA1YPR0 619 aa26.93■■□□□ 1.9
CAPN1-206ENST00000526966 ROCK2O75116 1388 aaKnown RBP26.93■■□□□ 1.9
CAPN1-206ENST00000526966 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
CAPN1-206ENST00000526966 MON2Q7Z3U7 1717 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms