RNA–Protein interactions for RNA: ENST00000526943.1

CKAP5-207, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 4

Gene CKAP5, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-207ENST00000526943 USP17L4A6NCW7 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L15C9J2P7 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L10C9JJH3 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L13C9JLJ4 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L12C9JPN9 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L11C9JVI0 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L21D6R901 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L18D6R9N7 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L22D6RA61 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L17D6RBQ6 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L19D6RCP7 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L20D6RJB6 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 C3orf80F5H4A9 247 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 MARSP56192 900 aaKnown RBP5.68□□□□□ -1.5
CKAP5-207ENST00000526943 FAM69CQ0P6D2 419 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L24Q0WX57 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L2Q6R6M4 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 C3orf67Q6ZVT6 689 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L1Q7RTZ2 530 aa5.68□□□□□ -1.5
CKAP5-207ENST00000526943 PIK3CDO00329 1044 aa5.67□□□□□ -1.5
CKAP5-207ENST00000526943 SERPINB4P48594 390 aa5.67□□□□□ -1.5
CKAP5-207ENST00000526943 ZC3H6P61129 1189 aaKnown RBP5.67□□□□□ -1.5
CKAP5-207ENST00000526943 GUCA2AQ02747 115 aa5.67□□□□□ -1.5
CKAP5-207ENST00000526943 NR1H3Q13133 447 aa5.67□□□□□ -1.5
CKAP5-207ENST00000526943 TSC1Q92574 1164 aa5.67□□□□□ -1.5
CKAP5-207ENST00000526943 ANKRD33BA6NCL7 494 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 USP17L5A8MUK1 530 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 COL9A1P20849 921 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 NR6A1Q15406 480 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 CRTC2Q53ET0 693 aaPredicted RBP5.66□□□□□ -1.5
CKAP5-207ENST00000526943 ZNF326Q5BKZ1 582 aaKnown RBP5.66□□□□□ -1.5
CKAP5-207ENST00000526943 C1orf216Q8TAB5 229 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 TATDN2Q93075 761 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 HLA-CQ95604 372 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 SCRIBQ14160 1630 aa5.66□□□□□ -1.5
CKAP5-207ENST00000526943 PPP1R3GB7ZBB8 358 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 RECKO95980 971 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 PTK7Q13308 1070 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 SWI5Q1ZZU3 235 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 UBXN4Q92575 508 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 SPATA32Q96LK8 384 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 PNMA3Q9UL41 463 aa5.65□□□□□ -1.5
CKAP5-207ENST00000526943 ERBB3P21860 1342 aa5.65□□□□□ -1.51
CKAP5-207ENST00000526943 TRIM6-TRIM34B2RNG4 842 aa5.64□□□□□ -1.51
CKAP5-207ENST00000526943 ATP2B4P23634 1241 aa5.64□□□□□ -1.51
CKAP5-207ENST00000526943 MYT1Q01538 1121 aa5.64□□□□□ -1.51
CKAP5-207ENST00000526943 CDCA7Q9BWT1 371 aaPredicted RBP5.64□□□□□ -1.51
CKAP5-207ENST00000526943 EGFL7Q9UHF1 273 aa5.64□□□□□ -1.51
CKAP5-207ENST00000526943 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
CKAP5-207ENST00000526943 SKIP12755 728 aa5.63□□□□□ -1.51
CKAP5-207ENST00000526943 SF3A1Q15459 793 aaKnown RBP5.63□□□□□ -1.51
CKAP5-207ENST00000526943 FAM200AQ8TCP9 573 aa5.63□□□□□ -1.51
CKAP5-207ENST00000526943 BCL2L12Q9HB09 334 aa5.63□□□□□ -1.51
CKAP5-207ENST00000526943 ZBBXA8MT70 800 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 ATP5J2-PTCD1G3V325 749 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 C6orf229H3BNL8 230 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 PER1O15534 1290 aaPredicted RBP5.62□□□□□ -1.51
CKAP5-207ENST00000526943 SLC10A3P09131 477 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 SUZ12Q15022 739 aaKnown RBP5.62□□□□□ -1.51
CKAP5-207ENST00000526943 DESI1Q6ICB0 168 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 LARP1Q6PKG0 1096 aaKnown RBP5.62□□□□□ -1.51
CKAP5-207ENST00000526943 PACS2Q86VP3 889 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 RNF135Q8IUD6 432 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 FAM174AQ8TBP5 190 aa5.62□□□□□ -1.51
CKAP5-207ENST00000526943 BIN2Q9UBW5 565 aaPredicted RBP5.62□□□□□ -1.51
CKAP5-207ENST00000526943 MKRN1Q9UHC7 482 aaKnown RBP5.62□□□□□ -1.51
CKAP5-207ENST00000526943 SMARCA5O60264 1052 aaPredicted RBP5.61□□□□□ -1.51
CKAP5-207ENST00000526943 COL19A1Q14993 1142 aa5.61□□□□□ -1.51
CKAP5-207ENST00000526943 NAALADL2Q58DX5 795 aa5.61□□□□□ -1.51
CKAP5-207ENST00000526943 ANKMY2Q8IV38 441 aa5.61□□□□□ -1.51
CKAP5-207ENST00000526943 ZNF775Q96BV0 537 aaPredicted RBP5.61□□□□□ -1.51
CKAP5-207ENST00000526943 CHMP4AQ9BY43 222 aa5.61□□□□□ -1.51
CKAP5-207ENST00000526943 CADPSQ9ULU8 1353 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 ZC3H4Q9UPT8 1303 aaKnown RBP5.6□□□□□ -1.51
CKAP5-207ENST00000526943 LZTS3O60299 673 aaPredicted RBP5.6□□□□□ -1.51
CKAP5-207ENST00000526943 NUDT7P0C024 238 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 RASA1P20936 1047 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 GRIPAP1Q4V328 841 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 DEPDC4Q8N2C3 294 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 ASB16Q96NS5 453 aa5.6□□□□□ -1.51
CKAP5-207ENST00000526943 PPM1GO15355 546 aaPredicted RBP5.59□□□□□ -1.51
CKAP5-207ENST00000526943 NCOA4Q13772 614 aa5.59□□□□□ -1.51
CKAP5-207ENST00000526943 RETREG3Q86VR2 466 aa5.59□□□□□ -1.51
CKAP5-207ENST00000526943 SMAPO00193 183 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 ICMTO60725 284 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 EIF5BO60841 1220 aaKnown RBP5.58□□□□□ -1.52
CKAP5-207ENST00000526943 PTPREP23469 700 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 TAGLNQ01995 201 aaKnown RBP5.58□□□□□ -1.52
CKAP5-207ENST00000526943 FUT2Q10981 343 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 PPP4R3BQ5MIZ7 849 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 TRAF7Q6Q0C0 670 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 TAS1R3Q7RTX0 852 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 ZNF592Q92610 1267 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 FKBPLQ9UIM3 349 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 CHIC2Q9UKJ5 165 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 MYO15BQ96JP2 1530 aa5.58□□□□□ -1.52
CKAP5-207ENST00000526943 PSDA5PKW4 1024 aaPredicted RBP5.57□□□□□ -1.52
CKAP5-207ENST00000526943 H3BRB1 525 aa5.57□□□□□ -1.52
CKAP5-207ENST00000526943 SCNN1AP37088 669 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms