RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
CHD7-204ENST00000526846 ST20-MTHFSA0A0A6YYL1 179 aa22.75■■□□□ 1.23
CHD7-204ENST00000526846 USP6P35125 1406 aa22.74■■□□□ 1.23
CHD7-204ENST00000526846 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
CHD7-204ENST00000526846 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
CHD7-204ENST00000526846 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
CHD7-204ENST00000526846 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
CHD7-204ENST00000526846 CABLES1Q8TDN4 633 aa22.73■■□□□ 1.23
CHD7-204ENST00000526846 PIK3C2AO00443 1686 aa22.73■■□□□ 1.23
CHD7-204ENST00000526846 FNBP4Q8N3X1 1017 aaPredicted RBP22.72■■□□□ 1.23
CHD7-204ENST00000526846 BRD4O60885 1362 aaPredicted RBP22.72■■□□□ 1.23
CHD7-204ENST00000526846 CPSF1Q10570 1443 aaKnown RBP22.72■■□□□ 1.23
CHD7-204ENST00000526846 CD163L1Q9NR16 1453 aa22.72■■□□□ 1.23
CHD7-204ENST00000526846 SLIT2O94813 1529 aa22.72■■□□□ 1.23
CHD7-204ENST00000526846 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
CHD7-204ENST00000526846 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
CHD7-204ENST00000526846 NRAPQ86VF7 1730 aa22.7■■□□□ 1.22
CHD7-204ENST00000526846 PAK3O75914 559 aaPredicted RBP22.69■■□□□ 1.22
CHD7-204ENST00000526846 NGLY1Q96IV0 654 aa22.69■■□□□ 1.22
CHD7-204ENST00000526846 PUS7Q96PZ0 661 aaKnown RBP22.69■■□□□ 1.22
CHD7-204ENST00000526846 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
CHD7-204ENST00000526846 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
CHD7-204ENST00000526846 ATRNO75882 1429 aa22.66■■□□□ 1.22
CHD7-204ENST00000526846 MYOM1P52179 1685 aa22.65■■□□□ 1.22
CHD7-204ENST00000526846 USP19O94966 1318 aa22.65■■□□□ 1.22
CHD7-204ENST00000526846 SOCS7O14512 581 aa22.65■■□□□ 1.22
CHD7-204ENST00000526846 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
CHD7-204ENST00000526846 SLIT3O75094 1523 aa22.64■■□□□ 1.21
CHD7-204ENST00000526846 USP21Q9UK80 565 aa22.64■■□□□ 1.21
CHD7-204ENST00000526846 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
CHD7-204ENST00000526846 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
CHD7-204ENST00000526846 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
CHD7-204ENST00000526846 GLI3P10071 1580 aa22.61■■□□□ 1.21
CHD7-204ENST00000526846 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
CHD7-204ENST00000526846 NUTM2GQ5VZR2 741 aa22.61■■□□□ 1.21
CHD7-204ENST00000526846 QTRT2Q9H974 415 aaKnown RBP22.61■■□□□ 1.21
CHD7-204ENST00000526846 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
CHD7-204ENST00000526846 FAM83GA6ND36 823 aa22.6■■□□□ 1.21
CHD7-204ENST00000526846 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
CHD7-204ENST00000526846 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
CHD7-204ENST00000526846 KTN1Q86UP2 1357 aaKnown RBP22.6■■□□□ 1.21
CHD7-204ENST00000526846 NINLQ9Y2I6 1382 aa22.6■■□□□ 1.21
CHD7-204ENST00000526846 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
CHD7-204ENST00000526846 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
CHD7-204ENST00000526846 RXRBP28702 533 aa22.58■■□□□ 1.21
CHD7-204ENST00000526846 TRPC5Q9UL62 973 aaPredicted RBP22.58■■□□□ 1.21
CHD7-204ENST00000526846 RGS12O14924 1447 aa22.57■■□□□ 1.2
CHD7-204ENST00000526846 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
CHD7-204ENST00000526846 TMF1P82094 1093 aa22.57■■□□□ 1.2
CHD7-204ENST00000526846 UNC5CLQ8IV45 518 aa22.57■■□□□ 1.2
CHD7-204ENST00000526846 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
CHD7-204ENST00000526846 COL18A1P39060 1754 aa22.56■■□□□ 1.2
CHD7-204ENST00000526846 KIAA0232Q92628 1395 aa22.56■■□□□ 1.2
CHD7-204ENST00000526846 EDC4Q6P2E9 1401 aaKnown RBP22.56■■□□□ 1.2
CHD7-204ENST00000526846 CPDO75976 1380 aa22.55■■□□□ 1.2
CHD7-204ENST00000526846 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
CHD7-204ENST00000526846 TMC1Q8TDI8 760 aa22.55■■□□□ 1.2
CHD7-204ENST00000526846 NFAT5O94916 1531 aa22.54■■□□□ 1.2
CHD7-204ENST00000526846 NLRP6P59044 892 aa22.52■■□□□ 1.2
CHD7-204ENST00000526846 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
CHD7-204ENST00000526846 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
CHD7-204ENST00000526846 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
CHD7-204ENST00000526846 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
CHD7-204ENST00000526846 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
CHD7-204ENST00000526846 GCP02774 474 aa22.51■■□□□ 1.19
CHD7-204ENST00000526846 HSPA5P11021 654 aaKnown RBP22.51■■□□□ 1.19
CHD7-204ENST00000526846 HDGFL2Q7Z4V5 671 aaPredicted RBP22.51■■□□□ 1.19
CHD7-204ENST00000526846 PRDM11Q9NQV5 511 aa22.51■■□□□ 1.19
CHD7-204ENST00000526846 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
CHD7-204ENST00000526846 ZC3H6P61129 1189 aaKnown RBP22.5■■□□□ 1.19
CHD7-204ENST00000526846 EIF4G2P78344 907 aaKnown RBP eCLIP22.5■■□□□ 1.19
CHD7-204ENST00000526846 VPS72Q15906 364 aa22.5■■□□□ 1.19
CHD7-204ENST00000526846 GJD4Q96KN9 370 aaPredicted RBP22.5■■□□□ 1.19
CHD7-204ENST00000526846 BTG4Q9NY30 223 aa22.5■■□□□ 1.19
CHD7-204ENST00000526846 LTN1O94822 1766 aa22.49■■□□□ 1.19
CHD7-204ENST00000526846 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
CHD7-204ENST00000526846 OVOS2A0A0J9YW53 1432 aa22.48■■□□□ 1.19
CHD7-204ENST00000526846 OVOS2Q6IE36 1432 aa22.48■■□□□ 1.19
CHD7-204ENST00000526846 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
CHD7-204ENST00000526846 CDCA8Q53HL2 280 aa22.48■■□□□ 1.19
CHD7-204ENST00000526846 NME9Q86XW9 330 aa22.47■■□□□ 1.19
CHD7-204ENST00000526846 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
CHD7-204ENST00000526846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHD7-204ENST00000526846 ABCC6O95255 1503 aa22.44■■□□□ 1.18
CHD7-204ENST00000526846 THSD7AQ9UPZ6 1657 aa22.44■■□□□ 1.18
CHD7-204ENST00000526846 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
CHD7-204ENST00000526846 AATKQ6ZMQ8 1374 aa22.42■■□□□ 1.18
CHD7-204ENST00000526846 SPATA31A5Q5VU36 1347 aa22.41■■□□□ 1.18
CHD7-204ENST00000526846 SPATA31A7Q8IWB4 1347 aa22.41■■□□□ 1.18
CHD7-204ENST00000526846 ARHGEF25Q86VW2 580 aa22.41■■□□□ 1.18
CHD7-204ENST00000526846 KCNH5Q8NCM2 988 aa22.41■■□□□ 1.18
CHD7-204ENST00000526846 ONECUT3O60422 494 aaPredicted RBP22.4■■□□□ 1.18
CHD7-204ENST00000526846 WNK3Q9BYP7 1800 aa22.4■■□□□ 1.18
CHD7-204ENST00000526846 EP400Q96L91 3159 aa22.39■■□□□ 1.18
CHD7-204ENST00000526846 C11orf95C9JLR9 678 aaPredicted RBP22.38■■□□□ 1.17
CHD7-204ENST00000526846 CARD14Q9BXL6 1004 aa22.37■■□□□ 1.17
CHD7-204ENST00000526846 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
CHD7-204ENST00000526846 SPATA31A1Q5TZJ5 1347 aa22.36■■□□□ 1.17
CHD7-204ENST00000526846 CCDC9Q9Y3X0 531 aaKnown RBP22.36■■□□□ 1.17
CHD7-204ENST00000526846 NSD3Q9BZ95 1437 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms