RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 GLI3P10071 1580 aa15.42■□□□□ 0.06
VPS11-202ENST00000526829 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
VPS11-202ENST00000526829 SBNO1A3KN83 1393 aa15.41■□□□□ 0.06
VPS11-202ENST00000526829 ABCA3Q99758 1704 aa15.41■□□□□ 0.06
VPS11-202ENST00000526829 UNC5CLQ8IV45 518 aa15.41■□□□□ 0.06
VPS11-202ENST00000526829 PSME1Q06323 249 aa15.4■□□□□ 0.06
VPS11-202ENST00000526829 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
VPS11-202ENST00000526829 SAFB2Q14151 953 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS11-202ENST00000526829 NWD2Q9ULI1 1742 aa15.38■□□□□ 0.05
VPS11-202ENST00000526829 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
VPS11-202ENST00000526829 POGKQ9P215 609 aa15.38■□□□□ 0.05
VPS11-202ENST00000526829 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
VPS11-202ENST00000526829 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
VPS11-202ENST00000526829 CCDC125Q86Z20 511 aa15.37■□□□□ 0.05
VPS11-202ENST00000526829 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
VPS11-202ENST00000526829 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
VPS11-202ENST00000526829 BRWD3Q6RI45 1802 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 CABLES1Q8TDN4 633 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 ALS2Q96Q42 1657 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
VPS11-202ENST00000526829 VPS72Q15906 364 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
VPS11-202ENST00000526829 TULP4Q9NRJ4 1543 aa15.34■□□□□ 0.05
VPS11-202ENST00000526829 EIF3AQ14152 1382 aaKnown RBP15.34■□□□□ 0.05
VPS11-202ENST00000526829 EP400Q96L91 3159 aa15.34■□□□□ 0.05
VPS11-202ENST00000526829 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
VPS11-202ENST00000526829 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.05
VPS11-202ENST00000526829 PRR36Q9H6K5 1346 aa15.33■□□□□ 0.04
VPS11-202ENST00000526829 NRAPQ86VF7 1730 aa15.32■□□□□ 0.04
VPS11-202ENST00000526829 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
VPS11-202ENST00000526829 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
VPS11-202ENST00000526829 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
VPS11-202ENST00000526829 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
VPS11-202ENST00000526829 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
VPS11-202ENST00000526829 LMOD2Q6P5Q4 547 aa15.31■□□□□ 0.04
VPS11-202ENST00000526829 HIRIP3Q9BW71 556 aaPredicted RBP15.31■□□□□ 0.04
VPS11-202ENST00000526829 MINK1Q8N4C8 1332 aaPredicted RBP15.31■□□□□ 0.04
VPS11-202ENST00000526829 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
VPS11-202ENST00000526829 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
VPS11-202ENST00000526829 GPRASP1Q5JY77 1395 aa15.3■□□□□ 0.04
VPS11-202ENST00000526829 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
VPS11-202ENST00000526829 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
VPS11-202ENST00000526829 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
VPS11-202ENST00000526829 ITSN1Q15811 1721 aa15.29■□□□□ 0.04
VPS11-202ENST00000526829 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
VPS11-202ENST00000526829 ATP7BP35670 1465 aa15.27■□□□□ 0.04
VPS11-202ENST00000526829 KIAA1210Q9ULL0 1709 aa15.27■□□□□ 0.03
VPS11-202ENST00000526829 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
VPS11-202ENST00000526829 AAMPQ13685 434 aa15.25■□□□□ 0.03
VPS11-202ENST00000526829 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
VPS11-202ENST00000526829 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
VPS11-202ENST00000526829 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
VPS11-202ENST00000526829 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
VPS11-202ENST00000526829 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
VPS11-202ENST00000526829 BTG4Q9NY30 223 aa15.24■□□□□ 0.03
VPS11-202ENST00000526829 NUDT16Q96DE0 195 aaKnown RBP15.23■□□□□ 0.03
VPS11-202ENST00000526829 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
VPS11-202ENST00000526829 PHRF1Q9P1Y6 1649 aaKnown RBP15.22■□□□□ 0.03
VPS11-202ENST00000526829 THSD7AQ9UPZ6 1657 aa15.21■□□□□ 0.03
VPS11-202ENST00000526829 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.03
VPS11-202ENST00000526829 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.02
VPS11-202ENST00000526829 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.02
VPS11-202ENST00000526829 SF3B2Q13435 895 aaKnown RBP15.2■□□□□ 0.02
VPS11-202ENST00000526829 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
VPS11-202ENST00000526829 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
VPS11-202ENST00000526829 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
VPS11-202ENST00000526829 GLIPR1L2Q4G1C9 344 aa15.2■□□□□ 0.02
VPS11-202ENST00000526829 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
VPS11-202ENST00000526829 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
VPS11-202ENST00000526829 PRDM11Q9NQV5 511 aa15.18■□□□□ 0.02
VPS11-202ENST00000526829 PLEKHG3A1L390 1219 aa15.18■□□□□ 0.02
VPS11-202ENST00000526829 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
VPS11-202ENST00000526829 RGPD1P0DJD0 1748 aa15.17■□□□□ 0.02
VPS11-202ENST00000526829 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
VPS11-202ENST00000526829 A0A0G2JS52 829 aa15.16■□□□□ 0.02
VPS11-202ENST00000526829 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
VPS11-202ENST00000526829 ACEP12821 1306 aa15.16■□□□□ 0.02
VPS11-202ENST00000526829 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
VPS11-202ENST00000526829 NRKQ7Z2Y5 1582 aa15.16■□□□□ 0.02
VPS11-202ENST00000526829 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
VPS11-202ENST00000526829 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
VPS11-202ENST00000526829 BAG6P46379 1132 aa15.15■□□□□ 0.02
VPS11-202ENST00000526829 LRP5O75197 1615 aa15.14■□□□□ 0.01
VPS11-202ENST00000526829 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
VPS11-202ENST00000526829 DISP2A7MBM2 1401 aa15.13■□□□□ 0.01
VPS11-202ENST00000526829 CHRNA2Q15822 529 aa15.13■□□□□ 0.01
VPS11-202ENST00000526829 USP19O94966 1318 aa15.13■□□□□ 0.01
VPS11-202ENST00000526829 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
VPS11-202ENST00000526829 CPDO75976 1380 aa15.12■□□□□ 0.01
VPS11-202ENST00000526829 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
VPS11-202ENST00000526829 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
VPS11-202ENST00000526829 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
VPS11-202ENST00000526829 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
VPS11-202ENST00000526829 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
VPS11-202ENST00000526829 CAMTA1Q9Y6Y1 1673 aa15.11■□□□□ 0.01
VPS11-202ENST00000526829 PPIP5K1Q6PFW1 1433 aa15.11■□□□□ 0.01
VPS11-202ENST00000526829 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
VPS11-202ENST00000526829 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
VPS11-202ENST00000526829 FAM182BQ5T319 152 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms