RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 RALGAPBQ86X10 1494 aa15.79■□□□□ 0.12
SNRNP35-203ENST00000526639 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
SNRNP35-203ENST00000526639 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
SNRNP35-203ENST00000526639 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
SNRNP35-203ENST00000526639 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
SNRNP35-203ENST00000526639 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
SNRNP35-203ENST00000526639 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
SNRNP35-203ENST00000526639 TRPC5Q9UL62 973 aaPredicted RBP15.77■□□□□ 0.12
SNRNP35-203ENST00000526639 ALS2Q96Q42 1657 aa15.77■□□□□ 0.11
SNRNP35-203ENST00000526639 FAM83GA6ND36 823 aa15.75■□□□□ 0.11
SNRNP35-203ENST00000526639 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
SNRNP35-203ENST00000526639 ABTB2Q8N961 1025 aa15.75■□□□□ 0.11
SNRNP35-203ENST00000526639 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
SNRNP35-203ENST00000526639 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
SNRNP35-203ENST00000526639 SLIT2O94813 1529 aa15.73■□□□□ 0.11
SNRNP35-203ENST00000526639 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
SNRNP35-203ENST00000526639 RGS12O14924 1447 aa15.72■□□□□ 0.11
SNRNP35-203ENST00000526639 ATRNO75882 1429 aa15.72■□□□□ 0.11
SNRNP35-203ENST00000526639 GJD4Q96KN9 370 aaPredicted RBP15.71■□□□□ 0.11
SNRNP35-203ENST00000526639 SBNO2Q9Y2G9 1366 aa15.71■□□□□ 0.11
SNRNP35-203ENST00000526639 BTG4Q9NY30 223 aa15.71■□□□□ 0.1
SNRNP35-203ENST00000526639 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
SNRNP35-203ENST00000526639 CDK12Q9NYV4 1490 aaPredicted RBP15.7■□□□□ 0.1
SNRNP35-203ENST00000526639 USP6P35125 1406 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 PRDM11Q9NQV5 511 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 CCDC9Q9Y3X0 531 aaKnown RBP15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 CHRNA2Q15822 529 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 TESK2Q96S53 571 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 PLCH1Q4KWH8 1693 aa15.69■□□□□ 0.1
SNRNP35-203ENST00000526639 CRYBG1Q9Y4K1 1723 aa15.68■□□□□ 0.1
SNRNP35-203ENST00000526639 EP400Q96L91 3159 aa15.68■□□□□ 0.1
SNRNP35-203ENST00000526639 KIAA0232Q92628 1395 aa15.68■□□□□ 0.1
SNRNP35-203ENST00000526639 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
SNRNP35-203ENST00000526639 NLRP6P59044 892 aa15.67■□□□□ 0.1
SNRNP35-203ENST00000526639 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
SNRNP35-203ENST00000526639 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
SNRNP35-203ENST00000526639 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.67■□□□□ 0.1
SNRNP35-203ENST00000526639 VPS72Q15906 364 aa15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 USP47Q96K76 1375 aa15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 PHRF1Q9P1Y6 1649 aaKnown RBP15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 GCP02774 474 aa15.66■□□□□ 0.1
SNRNP35-203ENST00000526639 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNRNP35-203ENST00000526639 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
SNRNP35-203ENST00000526639 SSH2Q76I76 1423 aa15.65■□□□□ 0.1
SNRNP35-203ENST00000526639 NWD2Q9ULI1 1742 aa15.65■□□□□ 0.1
SNRNP35-203ENST00000526639 TTC21BQ7Z4L5 1316 aa15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 CPSF1Q10570 1443 aaKnown RBP15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 GLI3P10071 1580 aa15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 COL14A1Q05707 1796 aaKnown RBP15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 USP19O94966 1318 aa15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRNP35-203ENST00000526639 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
SNRNP35-203ENST00000526639 STRN4Q9NRL3 753 aa15.63■□□□□ 0.09
SNRNP35-203ENST00000526639 SOX12O15370 315 aa15.62■□□□□ 0.09
SNRNP35-203ENST00000526639 NRKQ7Z2Y5 1582 aa15.62■□□□□ 0.09
SNRNP35-203ENST00000526639 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
SNRNP35-203ENST00000526639 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
SNRNP35-203ENST00000526639 CD163L1Q9NR16 1453 aa15.61■□□□□ 0.09
SNRNP35-203ENST00000526639 PIK3C2AO00443 1686 aa15.61■□□□□ 0.09
SNRNP35-203ENST00000526639 A0A0G2JS52 829 aa15.61■□□□□ 0.09
SNRNP35-203ENST00000526639 MYT1Q01538 1121 aa15.61■□□□□ 0.09
SNRNP35-203ENST00000526639 NRAPQ86VF7 1730 aa15.61■□□□□ 0.09
SNRNP35-203ENST00000526639 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 SEPT12Q8IYM1 358 aa15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 TMF1P82094 1093 aa15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 HDGFL2Q7Z4V5 671 aaPredicted RBP15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
SNRNP35-203ENST00000526639 TTC21AQ8NDW8 1320 aa15.59■□□□□ 0.09
SNRNP35-203ENST00000526639 EVA1CP58658 441 aa15.59■□□□□ 0.09
SNRNP35-203ENST00000526639 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
SNRNP35-203ENST00000526639 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
SNRNP35-203ENST00000526639 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.09
SNRNP35-203ENST00000526639 CPDO75976 1380 aa15.58■□□□□ 0.08
SNRNP35-203ENST00000526639 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.08
SNRNP35-203ENST00000526639 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.08
SNRNP35-203ENST00000526639 ONECUT3O60422 494 aaPredicted RBP15.58■□□□□ 0.08
SNRNP35-203ENST00000526639 NME9Q86XW9 330 aa15.58■□□□□ 0.08
SNRNP35-203ENST00000526639 CAMTA1Q9Y6Y1 1673 aa15.57■□□□□ 0.08
SNRNP35-203ENST00000526639 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
SNRNP35-203ENST00000526639 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
SNRNP35-203ENST00000526639 SLIT3O75094 1523 aa15.56■□□□□ 0.08
SNRNP35-203ENST00000526639 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
SNRNP35-203ENST00000526639 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
SNRNP35-203ENST00000526639 KCNH5Q8NCM2 988 aa15.55■□□□□ 0.08
SNRNP35-203ENST00000526639 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
SNRNP35-203ENST00000526639 LMO7Q8WWI1 1683 aa15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 EDC4Q6P2E9 1401 aaKnown RBP15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 FAM182BQ5T319 152 aa15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 ARHGEF25Q86VW2 580 aa15.53■□□□□ 0.08
SNRNP35-203ENST00000526639 NINLQ9Y2I6 1382 aa15.52■□□□□ 0.08
SNRNP35-203ENST00000526639 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms