RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 ITSN1Q15811 1721 aa16.03■□□□□ 0.16
AMBRA1-204ENST00000526545 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
AMBRA1-204ENST00000526545 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
AMBRA1-204ENST00000526545 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.16
AMBRA1-204ENST00000526545 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
AMBRA1-204ENST00000526545 BLMP54132 1417 aaPredicted RBP16.01■□□□□ 0.15
AMBRA1-204ENST00000526545 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
AMBRA1-204ENST00000526545 NBPF8Q3BBV2 869 aa16■□□□□ 0.15
AMBRA1-204ENST00000526545 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
AMBRA1-204ENST00000526545 ACEP12821 1306 aa15.99■□□□□ 0.15
AMBRA1-204ENST00000526545 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
AMBRA1-204ENST00000526545 KRT27Q7Z3Y8 459 aa15.99■□□□□ 0.15
AMBRA1-204ENST00000526545 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
AMBRA1-204ENST00000526545 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
AMBRA1-204ENST00000526545 SRPK2P78362 688 aaKnown RBP15.97■□□□□ 0.15
AMBRA1-204ENST00000526545 L3MBTL2Q969R5 705 aa15.97■□□□□ 0.15
AMBRA1-204ENST00000526545 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
AMBRA1-204ENST00000526545 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
AMBRA1-204ENST00000526545 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
AMBRA1-204ENST00000526545 TOPAZ1Q8N9V7 1692 aa15.96■□□□□ 0.15
AMBRA1-204ENST00000526545 FAM98CQ17RN3 349 aaKnown RBP15.96■□□□□ 0.15
AMBRA1-204ENST00000526545 CRYBG1Q9Y4K1 1723 aa15.96■□□□□ 0.15
AMBRA1-204ENST00000526545 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.14
AMBRA1-204ENST00000526545 A0A0G2JS52 829 aa15.95■□□□□ 0.14
AMBRA1-204ENST00000526545 MYT1Q01538 1121 aa15.95■□□□□ 0.14
AMBRA1-204ENST00000526545 ABTB2Q8N961 1025 aa15.95■□□□□ 0.14
AMBRA1-204ENST00000526545 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
AMBRA1-204ENST00000526545 KIAA0232Q92628 1395 aa15.94■□□□□ 0.14
AMBRA1-204ENST00000526545 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
AMBRA1-204ENST00000526545 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
AMBRA1-204ENST00000526545 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
AMBRA1-204ENST00000526545 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
AMBRA1-204ENST00000526545 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
AMBRA1-204ENST00000526545 SIN3AQ96ST3 1273 aa15.92■□□□□ 0.14
AMBRA1-204ENST00000526545 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
AMBRA1-204ENST00000526545 CHRNA2Q15822 529 aa15.91■□□□□ 0.14
AMBRA1-204ENST00000526545 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
AMBRA1-204ENST00000526545 EVC2Q86UK5 1308 aa15.91■□□□□ 0.14
AMBRA1-204ENST00000526545 PHRF1Q9P1Y6 1649 aaKnown RBP15.9■□□□□ 0.14
AMBRA1-204ENST00000526545 CPDO75976 1380 aa15.9■□□□□ 0.14
AMBRA1-204ENST00000526545 EVA1CP58658 441 aa15.9■□□□□ 0.14
AMBRA1-204ENST00000526545 NEUROD1Q13562 356 aa15.9■□□□□ 0.14
AMBRA1-204ENST00000526545 USP19O94966 1318 aa15.9■□□□□ 0.14
AMBRA1-204ENST00000526545 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
AMBRA1-204ENST00000526545 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
AMBRA1-204ENST00000526545 CABP1Q9NZU7 370 aa15.89■□□□□ 0.13
AMBRA1-204ENST00000526545 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
AMBRA1-204ENST00000526545 TRPM1Q7Z4N2 1603 aa15.88■□□□□ 0.13
AMBRA1-204ENST00000526545 GCP02774 474 aa15.88■□□□□ 0.13
AMBRA1-204ENST00000526545 BAG6P46379 1132 aa15.88■□□□□ 0.13
AMBRA1-204ENST00000526545 STRN4Q9NRL3 753 aa15.88■□□□□ 0.13
AMBRA1-204ENST00000526545 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
AMBRA1-204ENST00000526545 THSD7AQ9UPZ6 1657 aa15.86■□□□□ 0.13
AMBRA1-204ENST00000526545 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
AMBRA1-204ENST00000526545 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
AMBRA1-204ENST00000526545 USP6P35125 1406 aa15.85■□□□□ 0.13
AMBRA1-204ENST00000526545 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
AMBRA1-204ENST00000526545 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
AMBRA1-204ENST00000526545 CAMTA1Q9Y6Y1 1673 aa15.84■□□□□ 0.13
AMBRA1-204ENST00000526545 NLRP6P59044 892 aa15.84■□□□□ 0.13
AMBRA1-204ENST00000526545 FAM196AQ6ZSG2 479 aa15.84■□□□□ 0.13
AMBRA1-204ENST00000526545 THRAP3Q9Y2W1 955 aaKnown RBP15.84■□□□□ 0.13
AMBRA1-204ENST00000526545 FAM182BQ5T319 152 aa15.83■□□□□ 0.12
AMBRA1-204ENST00000526545 LARP1Q6PKG0 1096 aaKnown RBP15.83■□□□□ 0.12
AMBRA1-204ENST00000526545 TCP11L2Q8N4U5 519 aa15.83■□□□□ 0.12
AMBRA1-204ENST00000526545 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
AMBRA1-204ENST00000526545 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
AMBRA1-204ENST00000526545 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
AMBRA1-204ENST00000526545 RGPD1P0DJD0 1748 aa15.81■□□□□ 0.12
AMBRA1-204ENST00000526545 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
AMBRA1-204ENST00000526545 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
AMBRA1-204ENST00000526545 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
AMBRA1-204ENST00000526545 SLIT3O75094 1523 aa15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 COL5A2P05997 1499 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 TTC21AQ8NDW8 1320 aa15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 C11orf95C9JLR9 678 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 KCNH5Q8NCM2 988 aa15.79■□□□□ 0.12
AMBRA1-204ENST00000526545 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
AMBRA1-204ENST00000526545 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
AMBRA1-204ENST00000526545 CRB1P82279 1406 aa15.77■□□□□ 0.12
AMBRA1-204ENST00000526545 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.12
AMBRA1-204ENST00000526545 TRIM37O94972 964 aa15.77■□□□□ 0.12
AMBRA1-204ENST00000526545 TONSLQ96HA7 1378 aa15.76■□□□□ 0.11
AMBRA1-204ENST00000526545 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
AMBRA1-204ENST00000526545 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 PARD3Q8TEW0 1356 aa15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 APBA3O96018 575 aa15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 CAMKK2Q96RR4 588 aa15.75■□□□□ 0.11
AMBRA1-204ENST00000526545 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-204ENST00000526545 TOM1L2Q6ZVM7 507 aa15.74■□□□□ 0.11
AMBRA1-204ENST00000526545 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-204ENST00000526545 AKAP12Q02952 1782 aa15.74■□□□□ 0.11
AMBRA1-204ENST00000526545 WDR17Q8IZU2 1322 aa15.73■□□□□ 0.11
AMBRA1-204ENST00000526545 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
AMBRA1-204ENST00000526545 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
AMBRA1-204ENST00000526545 CDCA7Q9BWT1 371 aaPredicted RBP15.73■□□□□ 0.11
AMBRA1-204ENST00000526545 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms