RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 HDGFL2Q7Z4V5 671 aaPredicted RBP30.03■■■□□ 2.4
ME3-205ENST00000526504 POLR3AO14802 1390 aaPredicted RBP30.03■■■□□ 2.4
ME3-205ENST00000526504 ANKRD36BQ8N2N9 1353 aa30.03■■■□□ 2.4
ME3-205ENST00000526504 KIF1AQ12756 1690 aa30.02■■■□□ 2.4
ME3-205ENST00000526504 CD163L1Q9NR16 1453 aa30.02■■■□□ 2.4
ME3-205ENST00000526504 SMG6Q86US8 1419 aaKnown RBP30.01■■■□□ 2.4
ME3-205ENST00000526504 A0A1W2PP64 1363 aa30.01■■■□□ 2.39
ME3-205ENST00000526504 CPSF1Q10570 1443 aaKnown RBP30■■■□□ 2.39
ME3-205ENST00000526504 FOXO3O43524 673 aa30■■■□□ 2.39
ME3-205ENST00000526504 ZNF692Q9BU19 519 aaPredicted RBP29.99■■■□□ 2.39
ME3-205ENST00000526504 PIP4K2BP78356 416 aa29.98■■■□□ 2.39
ME3-205ENST00000526504 ROBO1Q9Y6N7 1651 aa29.96■■■□□ 2.39
ME3-205ENST00000526504 PSME1Q06323 249 aa29.95■■■□□ 2.39
ME3-205ENST00000526504 NPHP3Q7Z494 1330 aa29.95■■■□□ 2.39
ME3-205ENST00000526504 PELP1Q8IZL8 1130 aaKnown RBP29.95■■■□□ 2.38
ME3-205ENST00000526504 AKAP12Q02952 1782 aa29.94■■■□□ 2.38
ME3-205ENST00000526504 CARD14Q9BXL6 1004 aa29.93■■■□□ 2.38
ME3-205ENST00000526504 USP6P35125 1406 aa29.93■■■□□ 2.38
ME3-205ENST00000526504 ERICH6BQ5W0A0 696 aa29.92■■■□□ 2.38
ME3-205ENST00000526504 DDX17Q92841 729 aaKnown RBP29.92■■■□□ 2.38
ME3-205ENST00000526504 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
ME3-205ENST00000526504 BLMP54132 1417 aaPredicted RBP29.92■■■□□ 2.38
ME3-205ENST00000526504 XPCQ01831 940 aaPredicted RBP29.9■■■□□ 2.38
ME3-205ENST00000526504 NUDCQ9Y266 331 aa29.9■■■□□ 2.38
ME3-205ENST00000526504 NSD3Q9BZ95 1437 aa29.9■■■□□ 2.38
ME3-205ENST00000526504 MON2Q7Z3U7 1717 aa29.9■■■□□ 2.38
ME3-205ENST00000526504 KRT28Q7Z3Y7 464 aa29.9■■■□□ 2.38
ME3-205ENST00000526504 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.38
ME3-205ENST00000526504 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
ME3-205ENST00000526504 PXDNQ92626 1479 aa29.85■■■□□ 2.37
ME3-205ENST00000526504 SSH2Q76I76 1423 aa29.85■■■□□ 2.37
ME3-205ENST00000526504 TTC21BQ7Z4L5 1316 aa29.85■■■□□ 2.37
ME3-205ENST00000526504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.85■■■□□ 2.37
ME3-205ENST00000526504 SOS2Q07890 1332 aaPredicted RBP29.84■■■□□ 2.37
ME3-205ENST00000526504 PAK3O75914 559 aaPredicted RBP29.84■■■□□ 2.37
ME3-205ENST00000526504 AHDC1Q5TGY3 1603 aaPredicted RBP29.84■■■□□ 2.37
ME3-205ENST00000526504 NRKQ7Z2Y5 1582 aa29.84■■■□□ 2.37
ME3-205ENST00000526504 CGNL1Q0VF96 1302 aa29.82■■■□□ 2.36
ME3-205ENST00000526504 TTC21AQ8NDW8 1320 aa29.82■■■□□ 2.36
ME3-205ENST00000526504 SBNO1A3KN83 1393 aa29.81■■■□□ 2.36
ME3-205ENST00000526504 PDE3BQ13370 1112 aa29.8■■■□□ 2.36
ME3-205ENST00000526504 TRPM3Q9HCF6 1732 aaPredicted RBP29.79■■■□□ 2.36
ME3-205ENST00000526504 RNF123Q5XPI4 1314 aa29.78■■■□□ 2.36
ME3-205ENST00000526504 NME9Q86XW9 330 aa29.77■■■□□ 2.36
ME3-205ENST00000526504 FYB1O15117 783 aa29.76■■■□□ 2.35
ME3-205ENST00000526504 ABTB2Q8N961 1025 aa29.76■■■□□ 2.35
ME3-205ENST00000526504 TNS3Q68CZ2 1445 aa29.76■■■□□ 2.35
ME3-205ENST00000526504 SPATA31A3Q5VYP0 1347 aa29.75■■■□□ 2.35
ME3-205ENST00000526504 PHLPP1O60346 1717 aa29.75■■■□□ 2.35
ME3-205ENST00000526504 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
ME3-205ENST00000526504 LRRC59Q96AG4 307 aaKnown RBP29.73■■■□□ 2.35
ME3-205ENST00000526504 GGNBP2Q9H3C7 697 aa29.72■■■□□ 2.35
ME3-205ENST00000526504 NSD2O96028 1365 aa29.72■■■□□ 2.35
ME3-205ENST00000526504 PIK3C2AO00443 1686 aa29.71■■■□□ 2.35
ME3-205ENST00000526504 ADAMTS8Q9UP79 889 aa29.71■■■□□ 2.35
ME3-205ENST00000526504 COL16A1Q07092 1604 aaPredicted RBP29.71■■■□□ 2.35
ME3-205ENST00000526504 ARHGEF10O15013 1369 aa29.71■■■□□ 2.35
ME3-205ENST00000526504 KIF20BQ96Q89 1820 aa29.7■■■□□ 2.35
ME3-205ENST00000526504 NLRP6P59044 892 aa29.7■■■□□ 2.35
ME3-205ENST00000526504 WDR43Q15061 677 aaKnown RBP eCLIP29.7■■■□□ 2.35
ME3-205ENST00000526504 NUTM2GQ5VZR2 741 aa29.7■■■□□ 2.35
ME3-205ENST00000526504 ALS2Q96Q42 1657 aa29.7■■■□□ 2.35
ME3-205ENST00000526504 ZRANB1Q9UGI0 708 aa29.69■■■□□ 2.34
ME3-205ENST00000526504 COG3Q96JB2 828 aa29.68■■■□□ 2.34
ME3-205ENST00000526504 USP31Q70CQ4 1352 aa29.68■■■□□ 2.34
ME3-205ENST00000526504 FBXO41Q8TF61 875 aa29.67■■■□□ 2.34
ME3-205ENST00000526504 HSPA1LP34931 641 aa29.65■■■□□ 2.34
ME3-205ENST00000526504 IRX6P78412 446 aaPredicted RBP29.65■■■□□ 2.34
ME3-205ENST00000526504 OVOS2A0A0J9YW53 1432 aa29.65■■■□□ 2.34
ME3-205ENST00000526504 OVOS2Q6IE36 1432 aa29.65■■■□□ 2.34
ME3-205ENST00000526504 MORC1Q86VD1 984 aa29.64■■■□□ 2.34
ME3-205ENST00000526504 PPP4R2Q9NY27 417 aa29.64■■■□□ 2.34
ME3-205ENST00000526504 SENP3-EIF4A1A0A087X0R7 540 aa29.62■■■□□ 2.33
ME3-205ENST00000526504 ANKRD26Q9UPS8 1709 aa29.61■■■□□ 2.33
ME3-205ENST00000526504 USP54Q70EL1 1684 aa29.61■■■□□ 2.33
ME3-205ENST00000526504 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
ME3-205ENST00000526504 PNPLA6Q8IY17 1366 aa29.6■■■□□ 2.33
ME3-205ENST00000526504 USP19O94966 1318 aa29.59■■■□□ 2.33
ME3-205ENST00000526504 MED1Q15648 1581 aaPredicted RBP29.57■■■□□ 2.32
ME3-205ENST00000526504 MARF1Q9Y4F3 1742 aaKnown RBP29.57■■■□□ 2.32
ME3-205ENST00000526504 JCADQ9P266 1359 aa29.56■■■□□ 2.32
ME3-205ENST00000526504 TNNT2P45379 298 aaPredicted RBP29.56■■■□□ 2.32
ME3-205ENST00000526504 CABLES1Q8TDN4 633 aa29.56■■■□□ 2.32
ME3-205ENST00000526504 SALL2Q9Y467 1007 aaPredicted RBP29.55■■■□□ 2.32
ME3-205ENST00000526504 SHPRHQ149N8 1683 aa29.55■■■□□ 2.32
ME3-205ENST00000526504 SOX12O15370 315 aa29.54■■■□□ 2.32
ME3-205ENST00000526504 KCNH5Q8NCM2 988 aa29.54■■■□□ 2.32
ME3-205ENST00000526504 SLIT3O75094 1523 aa29.54■■■□□ 2.32
ME3-205ENST00000526504 COL22A1Q8NFW1 1626 aaPredicted RBP29.53■■■□□ 2.32
ME3-205ENST00000526504 GCP02774 474 aa29.53■■■□□ 2.32
ME3-205ENST00000526504 NGEFQ8N5V2 710 aa29.53■■■□□ 2.32
ME3-205ENST00000526504 ZNF521Q96K83 1311 aa29.53■■■□□ 2.32
ME3-205ENST00000526504 HAP1P54257 671 aaPredicted RBP29.51■■■□□ 2.31
ME3-205ENST00000526504 CDCA7LQ96GN5 454 aa29.5■■■□□ 2.31
ME3-205ENST00000526504 RCAN3Q9UKA8 241 aa29.5■■■□□ 2.31
ME3-205ENST00000526504 CRYBG1Q9Y4K1 1723 aa29.5■■■□□ 2.31
ME3-205ENST00000526504 PHRF1Q9P1Y6 1649 aaKnown RBP29.49■■■□□ 2.31
ME3-205ENST00000526504 AATKQ6ZMQ8 1374 aa29.49■■■□□ 2.31
ME3-205ENST00000526504 FBLN1P23142 703 aa29.49■■■□□ 2.31
ME3-205ENST00000526504 NFAT5O94916 1531 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms