RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
CLNS1A-205ENST00000526009 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
CLNS1A-205ENST00000526009 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
CLNS1A-205ENST00000526009 SEC24BO95487 1268 aa11.53□□□□□ -0.56
CLNS1A-205ENST00000526009 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
CLNS1A-205ENST00000526009 TRPM2O94759 1503 aa11.53□□□□□ -0.56
CLNS1A-205ENST00000526009 MST1RQ04912 1400 aa11.52□□□□□ -0.56
CLNS1A-205ENST00000526009 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
CLNS1A-205ENST00000526009 IER5LQ5T953 404 aa11.52□□□□□ -0.57
CLNS1A-205ENST00000526009 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
CLNS1A-205ENST00000526009 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-205ENST00000526009 PNPLA6Q8IY17 1366 aa11.52□□□□□ -0.57
CLNS1A-205ENST00000526009 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
CLNS1A-205ENST00000526009 C7P10643 843 aa11.5□□□□□ -0.57
CLNS1A-205ENST00000526009 USP21Q9UK80 565 aa11.5□□□□□ -0.57
CLNS1A-205ENST00000526009 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
CLNS1A-205ENST00000526009 TRPC5Q9UL62 973 aaPredicted RBP11.49□□□□□ -0.57
CLNS1A-205ENST00000526009 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
CLNS1A-205ENST00000526009 PLCG2P16885 1265 aa11.48□□□□□ -0.57
CLNS1A-205ENST00000526009 OCEL1Q9H607 264 aa11.48□□□□□ -0.57
CLNS1A-205ENST00000526009 METRNQ9UJH8 293 aa11.48□□□□□ -0.57
CLNS1A-205ENST00000526009 UNC13BO14795 1591 aa11.47□□□□□ -0.57
CLNS1A-205ENST00000526009 METP08581 1390 aa11.47□□□□□ -0.57
CLNS1A-205ENST00000526009 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
CLNS1A-205ENST00000526009 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
CLNS1A-205ENST00000526009 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
CLNS1A-205ENST00000526009 E9PCH4 1651 aa11.46□□□□□ -0.57
CLNS1A-205ENST00000526009 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
CLNS1A-205ENST00000526009 NUP155O75694 1391 aa11.46□□□□□ -0.57
CLNS1A-205ENST00000526009 CCDC125Q86Z20 511 aa11.46□□□□□ -0.57
CLNS1A-205ENST00000526009 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
CLNS1A-205ENST00000526009 XRN1Q8IZH2 1706 aaKnown RBP11.46□□□□□ -0.58
CLNS1A-205ENST00000526009 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 LHX8Q68G74 356 aa11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 SETBP1Q9Y6X0 1596 aa11.45□□□□□ -0.58
CLNS1A-205ENST00000526009 EP400Q96L91 3159 aa11.44□□□□□ -0.58
CLNS1A-205ENST00000526009 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
CLNS1A-205ENST00000526009 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
CLNS1A-205ENST00000526009 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
CLNS1A-205ENST00000526009 NRXN3Q9Y4C0 1643 aa11.43□□□□□ -0.58
CLNS1A-205ENST00000526009 PPP1R37O75864 691 aa11.43□□□□□ -0.58
CLNS1A-205ENST00000526009 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
CLNS1A-205ENST00000526009 ATRNO75882 1429 aa11.42□□□□□ -0.58
CLNS1A-205ENST00000526009 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
CLNS1A-205ENST00000526009 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
CLNS1A-205ENST00000526009 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
CLNS1A-205ENST00000526009 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
CLNS1A-205ENST00000526009 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
CLNS1A-205ENST00000526009 G3V3G9 751 aa11.38□□□□□ -0.59
CLNS1A-205ENST00000526009 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
CLNS1A-205ENST00000526009 LAMC1P11047 1609 aa11.38□□□□□ -0.59
CLNS1A-205ENST00000526009 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
CLNS1A-205ENST00000526009 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
CLNS1A-205ENST00000526009 ITGAEP38570 1179 aa11.37□□□□□ -0.59
CLNS1A-205ENST00000526009 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
CLNS1A-205ENST00000526009 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
CLNS1A-205ENST00000526009 FOXO3O43524 673 aa11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 MYOM2P54296 1465 aa11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-205ENST00000526009 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 SF3B2Q13435 895 aaKnown RBP11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 DEFB132Q7Z7B7 95 aa11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
CLNS1A-205ENST00000526009 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
CLNS1A-205ENST00000526009 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
CLNS1A-205ENST00000526009 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
CLNS1A-205ENST00000526009 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
CLNS1A-205ENST00000526009 PXDNQ92626 1479 aa11.31□□□□□ -0.6
CLNS1A-205ENST00000526009 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
CLNS1A-205ENST00000526009 SEPT12Q8IYM1 358 aa11.3□□□□□ -0.6
CLNS1A-205ENST00000526009 CLTCL1P53675 1640 aa11.3□□□□□ -0.6
CLNS1A-205ENST00000526009 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
CLNS1A-205ENST00000526009 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
CLNS1A-205ENST00000526009 SLIT2O94813 1529 aa11.29□□□□□ -0.6
CLNS1A-205ENST00000526009 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
CLNS1A-205ENST00000526009 GLI3P10071 1580 aa11.28□□□□□ -0.6
CLNS1A-205ENST00000526009 KIF1BO60333 1816 aa11.28□□□□□ -0.6
CLNS1A-205ENST00000526009 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 VPS72Q15906 364 aa11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
CLNS1A-205ENST00000526009 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 BAG6P46379 1132 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 STK26Q9P289 416 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 NAIPQ13075 1403 aa11.26□□□□□ -0.61
CLNS1A-205ENST00000526009 HRCP23327 699 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms