RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 WDR63Q8IWG1 891 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 TSPYL6Q8N831 410 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 SYAP1Q96A49 352 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 HECW1Q76N89 1606 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 ZHX1Q9UKY1 873 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 CLASP1Q7Z460 1538 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 CUL7Q14999 1698 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 IGSF3O75054 1194 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 PTMSP20962 102 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 GAS2L3Q86XJ1 694 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 HMMRO75330 724 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 RAPGEF3O95398 923 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 AMPHP49418 695 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 SULT6B1Q6IMI4 303 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 NUCB2P80303 420 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 OTUD7AQ8TE49 926 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 TSC1Q92574 1164 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 COG3Q96JB2 828 aa8.48□□□□□ -1.05
TGFBR3-207ENST00000525962 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 REC8O95072 547 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 CEBPZQ03701 1054 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 DENND4BO75064 1496 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 BAG4O95429 457 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 ZBTB9Q96C00 473 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 ZRANB1Q9UGI0 708 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 TXNDC2Q86VQ3 553 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 TSPYL4Q9UJ04 414 aa8.47□□□□□ -1.05
TGFBR3-207ENST00000525962 FERMT3Q86UX7 667 aa8.46□□□□□ -1.05
TGFBR3-207ENST00000525962 API5Q9BZZ5 524 aaKnown RBP8.46□□□□□ -1.05
TGFBR3-207ENST00000525962 PRAG1Q86YV5 1406 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 GNAI1P63096 354 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 CCDC173Q0VFZ6 552 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 IQGAP2Q13576 1575 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 PKP1Q13835 747 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 NGDNQ8NEJ9 315 aaKnown RBP8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 CDK19Q9BWU1 502 aa8.46□□□□□ -1.06
TGFBR3-207ENST00000525962 NUP153P49790 1475 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 CLCN1P35523 988 aa8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 CBX1P83916 185 aa8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 C17orf53Q8N3J3 647 aaPredicted RBP8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 SURF6O75683 361 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 STK3Q13188 491 aa8.45□□□□□ -1.06
TGFBR3-207ENST00000525962 RRP9O43818 475 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 NME9Q86XW9 330 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 USP25Q9UHP3 1055 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 KIAA0586Q9BVV6 1533 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 USP19O94966 1318 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 RABEP1Q15276 862 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 CAMK4Q16566 473 aa8.44□□□□□ -1.06
TGFBR3-207ENST00000525962 CFAP43Q8NDM7 1665 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 ZNF771Q7L3S4 317 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 IFT57Q9NWB7 429 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 C8orf58Q8NAV2 365 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 SMC3Q9UQE7 1217 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 GCC1Q96CN9 775 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
TGFBR3-207ENST00000525962 ZSCAN23Q3MJ62 389 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 LRRIQ1Q96JM4 1722 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 NUCB1Q02818 461 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 CREBRFQ8IUR6 639 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 MEIS3Q99687 375 aa8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 TTC12Q9H892 705 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-207ENST00000525962 TPM2P07951 284 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 TCEANC2Q96MN5 208 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 CFAP44Q96MT7 982 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 MBIPQ9NS73 344 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 ERC2O15083 957 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 HAP1P54257 671 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 RBM33Q96EV2 1170 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 RBSNQ9H1K0 784 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 PHF14O94880 888 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 ANXA1P04083 346 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 SDSP20132 328 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms