RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
PABPC4-220ENST00000525669 USP6P35125 1406 aa11.77□□□□□ -0.53
PABPC4-220ENST00000525669 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
PABPC4-220ENST00000525669 FBLN1P23142 703 aa11.75□□□□□ -0.53
PABPC4-220ENST00000525669 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
PABPC4-220ENST00000525669 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
PABPC4-220ENST00000525669 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
PABPC4-220ENST00000525669 TMEM94Q12767 1356 aa11.75□□□□□ -0.53
PABPC4-220ENST00000525669 MTHFSP49914 203 aa11.74□□□□□ -0.53
PABPC4-220ENST00000525669 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
PABPC4-220ENST00000525669 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
PABPC4-220ENST00000525669 KIF1AQ12756 1690 aa11.73□□□□□ -0.53
PABPC4-220ENST00000525669 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
PABPC4-220ENST00000525669 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
PABPC4-220ENST00000525669 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
PABPC4-220ENST00000525669 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
PABPC4-220ENST00000525669 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
PABPC4-220ENST00000525669 ORAI2Q96SN7 254 aa11.72□□□□□ -0.53
PABPC4-220ENST00000525669 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
PABPC4-220ENST00000525669 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
PABPC4-220ENST00000525669 COG3Q96JB2 828 aa11.71□□□□□ -0.53
PABPC4-220ENST00000525669 TRPM3Q9HCF6 1732 aaPredicted RBP11.71□□□□□ -0.54
PABPC4-220ENST00000525669 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-220ENST00000525669 PEAK1Q9H792 1746 aa11.7□□□□□ -0.54
PABPC4-220ENST00000525669 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
PABPC4-220ENST00000525669 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-220ENST00000525669 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
PABPC4-220ENST00000525669 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
PABPC4-220ENST00000525669 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 MST1RQ04912 1400 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-220ENST00000525669 SOX12O15370 315 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-220ENST00000525669 ATF3P18847 181 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-220ENST00000525669 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 LTN1O94822 1766 aa11.69□□□□□ -0.54
PABPC4-220ENST00000525669 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
PABPC4-220ENST00000525669 NCOA3Q9Y6Q9 1424 aa11.68□□□□□ -0.54
PABPC4-220ENST00000525669 MSH6P52701 1360 aa11.67□□□□□ -0.54
PABPC4-220ENST00000525669 ZBED9Q6R2W3 1325 aa11.67□□□□□ -0.54
PABPC4-220ENST00000525669 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
PABPC4-220ENST00000525669 PSME1Q06323 249 aa11.67□□□□□ -0.54
PABPC4-220ENST00000525669 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
PABPC4-220ENST00000525669 POLKQ9UBT6 870 aa11.67□□□□□ -0.54
PABPC4-220ENST00000525669 FOXO3O43524 673 aa11.66□□□□□ -0.54
PABPC4-220ENST00000525669 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
PABPC4-220ENST00000525669 DDX17Q92841 729 aaKnown RBP11.66□□□□□ -0.54
PABPC4-220ENST00000525669 DCCP43146 1447 aa11.66□□□□□ -0.54
PABPC4-220ENST00000525669 ALS2Q96Q42 1657 aa11.65□□□□□ -0.54
PABPC4-220ENST00000525669 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
PABPC4-220ENST00000525669 NLRP6P59044 892 aa11.65□□□□□ -0.54
PABPC4-220ENST00000525669 ABTB2Q8N961 1025 aa11.65□□□□□ -0.54
PABPC4-220ENST00000525669 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
PABPC4-220ENST00000525669 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
PABPC4-220ENST00000525669 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
PABPC4-220ENST00000525669 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
PABPC4-220ENST00000525669 INSRP06213 1382 aa11.64□□□□□ -0.55
PABPC4-220ENST00000525669 AATKQ6ZMQ8 1374 aa11.64□□□□□ -0.55
PABPC4-220ENST00000525669 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
PABPC4-220ENST00000525669 DIAPH1O60610 1272 aaKnown RBP11.63□□□□□ -0.55
PABPC4-220ENST00000525669 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
PABPC4-220ENST00000525669 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
PABPC4-220ENST00000525669 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
PABPC4-220ENST00000525669 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
PABPC4-220ENST00000525669 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
PABPC4-220ENST00000525669 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
PABPC4-220ENST00000525669 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
PABPC4-220ENST00000525669 LTBP4Q8N2S1 1624 aa11.61□□□□□ -0.55
PABPC4-220ENST00000525669 APAF1O14727 1248 aa11.61□□□□□ -0.55
PABPC4-220ENST00000525669 RGPD2P0DJD1 1756 aa11.61□□□□□ -0.55
PABPC4-220ENST00000525669 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
PABPC4-220ENST00000525669 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 IQSEC2Q5JU85 1478 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
PABPC4-220ENST00000525669 GTF3C3Q9Y5Q9 886 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 NFAT5O94916 1531 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
PABPC4-220ENST00000525669 PXDNQ92626 1479 aa11.59□□□□□ -0.55
PABPC4-220ENST00000525669 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
PABPC4-220ENST00000525669 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
PABPC4-220ENST00000525669 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
PABPC4-220ENST00000525669 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
PABPC4-220ENST00000525669 MED1Q15648 1581 aaPredicted RBP11.58□□□□□ -0.55
PABPC4-220ENST00000525669 HMOX1P09601 288 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 IL13P35225 146 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 BRINP3Q76B58 766 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 SLIT3O75094 1523 aa11.58□□□□□ -0.56
PABPC4-220ENST00000525669 ROBO1Q9Y6N7 1651 aa11.57□□□□□ -0.56
PABPC4-220ENST00000525669 AMPHP49418 695 aa11.57□□□□□ -0.56
PABPC4-220ENST00000525669 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms