RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 PHRF1Q9P1Y6 1649 aaKnown RBP16.77■□□□□ 0.27
GPATCH4-212ENST00000525375 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
GPATCH4-212ENST00000525375 LMOD2Q6P5Q4 547 aa16.75■□□□□ 0.27
GPATCH4-212ENST00000525375 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
GPATCH4-212ENST00000525375 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
GPATCH4-212ENST00000525375 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
GPATCH4-212ENST00000525375 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
GPATCH4-212ENST00000525375 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
GPATCH4-212ENST00000525375 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
GPATCH4-212ENST00000525375 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
GPATCH4-212ENST00000525375 TMF1P82094 1093 aa16.72■□□□□ 0.27
GPATCH4-212ENST00000525375 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
GPATCH4-212ENST00000525375 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
GPATCH4-212ENST00000525375 MEX3CQ5U5Q3 659 aaKnown RBP16.71■□□□□ 0.27
GPATCH4-212ENST00000525375 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
GPATCH4-212ENST00000525375 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
GPATCH4-212ENST00000525375 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
GPATCH4-212ENST00000525375 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
GPATCH4-212ENST00000525375 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
GPATCH4-212ENST00000525375 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
GPATCH4-212ENST00000525375 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
GPATCH4-212ENST00000525375 AFF2P51816 1311 aa16.69■□□□□ 0.26
GPATCH4-212ENST00000525375 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
GPATCH4-212ENST00000525375 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
GPATCH4-212ENST00000525375 SLIT3O75094 1523 aa16.67■□□□□ 0.26
GPATCH4-212ENST00000525375 USP19O94966 1318 aa16.67■□□□□ 0.26
GPATCH4-212ENST00000525375 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
GPATCH4-212ENST00000525375 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
GPATCH4-212ENST00000525375 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
GPATCH4-212ENST00000525375 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
GPATCH4-212ENST00000525375 SLIT2O94813 1529 aa16.65■□□□□ 0.26
GPATCH4-212ENST00000525375 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
GPATCH4-212ENST00000525375 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
GPATCH4-212ENST00000525375 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
GPATCH4-212ENST00000525375 NME9Q86XW9 330 aa16.64■□□□□ 0.25
GPATCH4-212ENST00000525375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
GPATCH4-212ENST00000525375 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
GPATCH4-212ENST00000525375 BCL9LQ86UU0 1499 aa16.64■□□□□ 0.25
GPATCH4-212ENST00000525375 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
GPATCH4-212ENST00000525375 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 NFAT5O94916 1531 aa16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 KIAA0232Q92628 1395 aa16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
GPATCH4-212ENST00000525375 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 NLRP6P59044 892 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
GPATCH4-212ENST00000525375 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
GPATCH4-212ENST00000525375 CARD14Q9BXL6 1004 aa16.6■□□□□ 0.25
GPATCH4-212ENST00000525375 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
GPATCH4-212ENST00000525375 ATRNO75882 1429 aa16.6■□□□□ 0.25
GPATCH4-212ENST00000525375 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
GPATCH4-212ENST00000525375 KIF20BQ96Q89 1820 aa16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 CDCA8Q53HL2 280 aa16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 USP21Q9UK80 565 aa16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
GPATCH4-212ENST00000525375 SOX12O15370 315 aa16.58■□□□□ 0.24
GPATCH4-212ENST00000525375 GCP02774 474 aa16.58■□□□□ 0.24
GPATCH4-212ENST00000525375 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
GPATCH4-212ENST00000525375 GLI3P10071 1580 aa16.58■□□□□ 0.24
GPATCH4-212ENST00000525375 COL18A1P39060 1754 aa16.58■□□□□ 0.24
GPATCH4-212ENST00000525375 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
GPATCH4-212ENST00000525375 CPDO75976 1380 aa16.56■□□□□ 0.24
GPATCH4-212ENST00000525375 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
GPATCH4-212ENST00000525375 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
GPATCH4-212ENST00000525375 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
GPATCH4-212ENST00000525375 BTG4Q9NY30 223 aa16.55■□□□□ 0.24
GPATCH4-212ENST00000525375 RGS12O14924 1447 aa16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 CCDC7Q96M83 1385 aa16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 FBLN1P23142 703 aa16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 LTN1O94822 1766 aa16.54■□□□□ 0.24
GPATCH4-212ENST00000525375 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
GPATCH4-212ENST00000525375 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
GPATCH4-212ENST00000525375 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
GPATCH4-212ENST00000525375 FYB1O15117 783 aa16.52■□□□□ 0.24
GPATCH4-212ENST00000525375 PANK3Q9H999 370 aa16.52■□□□□ 0.24
GPATCH4-212ENST00000525375 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
GPATCH4-212ENST00000525375 ARHGEF25Q86VW2 580 aa16.5■□□□□ 0.23
GPATCH4-212ENST00000525375 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
GPATCH4-212ENST00000525375 AXIN2Q9Y2T1 843 aa16.5■□□□□ 0.23
GPATCH4-212ENST00000525375 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
GPATCH4-212ENST00000525375 PEAK1Q9H792 1746 aa16.49■□□□□ 0.23
GPATCH4-212ENST00000525375 RXRBP28702 533 aa16.48■□□□□ 0.23
GPATCH4-212ENST00000525375 VPS72Q15906 364 aa16.48■□□□□ 0.23
GPATCH4-212ENST00000525375 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
GPATCH4-212ENST00000525375 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
GPATCH4-212ENST00000525375 COG3Q96JB2 828 aa16.47■□□□□ 0.23
GPATCH4-212ENST00000525375 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms