RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 METTL14Q9HCE5 456 aaKnown RBP6.23□□□□□ -1.41
CD44-213ENST00000525209 ARID4AP29374 1257 aaPredicted RBP6.22□□□□□ -1.41
CD44-213ENST00000525209 MARSP56192 900 aaKnown RBP6.22□□□□□ -1.41
CD44-213ENST00000525209 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
CD44-213ENST00000525209 CCDC181Q5TID7 509 aa6.22□□□□□ -1.41
CD44-213ENST00000525209 PHLDB3Q6NSJ2 640 aa6.22□□□□□ -1.41
CD44-213ENST00000525209 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
CD44-213ENST00000525209 TFIP11Q9UBB9 837 aaKnown RBP6.22□□□□□ -1.41
CD44-213ENST00000525209 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
CD44-213ENST00000525209 ANKRD33BA6NCL7 494 aa6.21□□□□□ -1.42
CD44-213ENST00000525209 SOWAHDA6NJG2 315 aa6.21□□□□□ -1.42
CD44-213ENST00000525209 TRIM6-TRIM34B2RNG4 842 aa6.21□□□□□ -1.42
CD44-213ENST00000525209 BCAMP50895 628 aa6.21□□□□□ -1.42
CD44-213ENST00000525209 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.42
CD44-213ENST00000525209 HSP90AB4PQ58FF6 505 aa6.21□□□□□ -1.42
CD44-213ENST00000525209 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD44-213ENST00000525209 TLDC2A0PJX2 215 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 MCCD1P59942 119 aaPredicted RBP6.2□□□□□ -1.42
CD44-213ENST00000525209 LARGE2Q8N3Y3 721 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 LNPKQ9C0E8 428 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 CDHR5Q9HBB8 845 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 CUEDC1Q9NWM3 386 aaPredicted RBP6.2□□□□□ -1.42
CD44-213ENST00000525209 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
CD44-213ENST00000525209 MAFGO15525 162 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
CD44-213ENST00000525209 ELOAQ14241 798 aaKnown RBP6.19□□□□□ -1.42
CD44-213ENST00000525209 EGFLAMQ63HQ2 1017 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 ANKK1Q8NFD2 765 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 ZFRQ96KR1 1074 aaKnown RBP6.19□□□□□ -1.42
CD44-213ENST00000525209 PHOX2BQ99453 314 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 ALG2Q9H553 416 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 LIMD1Q9UGP4 676 aa6.19□□□□□ -1.42
CD44-213ENST00000525209 SMAPO00193 183 aa6.18□□□□□ -1.42
CD44-213ENST00000525209 DIXDC1Q155Q3 683 aa6.18□□□□□ -1.42
CD44-213ENST00000525209 UCN2Q96RP3 112 aa6.18□□□□□ -1.42
CD44-213ENST00000525209 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
CD44-213ENST00000525209 FAM198AQ9UFP1 575 aa6.18□□□□□ -1.42
CD44-213ENST00000525209 C3orf80F5H4A9 247 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 IGBP1P78318 339 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 TUSC1Q2TAM9 212 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 FBXO33Q7Z6M2 555 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 MORC4Q8TE76 937 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 CDCA7LQ96GN5 454 aa6.17□□□□□ -1.42
CD44-213ENST00000525209 DNAJC2Q99543 621 aaKnown RBP6.17□□□□□ -1.42
CD44-213ENST00000525209 MAGEC2Q9UBF1 373 aaPredicted RBP6.17□□□□□ -1.42
CD44-213ENST00000525209 MAFBQ9Y5Q3 323 aaPredicted RBP6.17□□□□□ -1.42
CD44-213ENST00000525209 A0A0U1RQG5 324 aaPredicted RBP6.16□□□□□ -1.42
CD44-213ENST00000525209 SSFA2P28290 1259 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 PTPROQ16827 1216 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 TMEM164Q5U3C3 297 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 SDE2Q6IQ49 451 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 LAPTM4BQ86VI4 370 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 PIK3R5Q8WYR1 880 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 TANGO6Q9C0B7 1094 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 KLHL42Q9P2K6 505 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 NDUFB9Q9Y6M9 179 aa6.16□□□□□ -1.42
CD44-213ENST00000525209 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 SOWAHBA6NEL2 793 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 MAP4K4O95819 1239 aaPredicted RBP6.15□□□□□ -1.42
CD44-213ENST00000525209 CENPBP07199 599 aaPredicted RBP6.15□□□□□ -1.42
CD44-213ENST00000525209 PRSS12P56730 875 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 ANAPC15P60006 121 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 FGD1P98174 961 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 TAGLNQ01995 201 aaKnown RBP6.15□□□□□ -1.42
CD44-213ENST00000525209 FAM98CQ17RN3 349 aaKnown RBP6.15□□□□□ -1.42
CD44-213ENST00000525209 TSNAXIP1Q2TAA8 658 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 PACS2Q86VP3 889 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 KCNB2Q92953 911 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 GJD4Q96KN9 370 aaPredicted RBP6.15□□□□□ -1.42
CD44-213ENST00000525209 SPACA7Q96KW9 195 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 WBP1LQ9NX94 342 aa6.15□□□□□ -1.42
CD44-213ENST00000525209 PSME1Q06323 249 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 VAC14Q08AM6 782 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 RIC3Q7Z5B4 369 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 SMC5Q8IY18 1101 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 VTI1AQ96AJ9 217 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 PLCD4Q9BRC7 762 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 ZMIZ1Q9ULJ6 1067 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
CD44-213ENST00000525209 AP1G2O75843 785 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 PARNO95453 639 aaKnown RBP6.13□□□□□ -1.43
CD44-213ENST00000525209 USP17L8P0C7I0 530 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 HDLBPQ00341 1268 aaKnown RBP6.13□□□□□ -1.43
CD44-213ENST00000525209 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 SPTY2D1Q68D10 685 aaPredicted RBP6.13□□□□□ -1.43
CD44-213ENST00000525209 STK32AQ8WU08 396 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 BRINP2Q9C0B6 783 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.13□□□□□ -1.43
CD44-213ENST00000525209 BIN2Q9UBW5 565 aaPredicted RBP6.13□□□□□ -1.43
CD44-213ENST00000525209 HPS5Q9UPZ3 1129 aa6.13□□□□□ -1.43
CD44-213ENST00000525209 GPR37L1O60883 481 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 PEX14O75381 377 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 SERPINB4P48594 390 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 RAD51AP2Q09MP3 1159 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
CD44-213ENST00000525209 PRR7Q8TB68 274 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 LRCH3Q96II8 777 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 BACH2Q9BYV9 841 aa6.12□□□□□ -1.43
CD44-213ENST00000525209 UBA5Q9GZZ9 404 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms