RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
TSKU-202ENST00000525167 NGDNQ8NEJ9 315 aaKnown RBP25.05■■□□□ 1.6
TSKU-202ENST00000525167 ATP7BP35670 1465 aa25.04■■□□□ 1.6
TSKU-202ENST00000525167 CRYBG1Q9Y4K1 1723 aa25.04■■□□□ 1.6
TSKU-202ENST00000525167 BTG4Q9NY30 223 aa25.04■■□□□ 1.6
TSKU-202ENST00000525167 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
TSKU-202ENST00000525167 NUDT16Q96DE0 195 aaKnown RBP25■■□□□ 1.59
TSKU-202ENST00000525167 PAK3O75914 559 aaPredicted RBP24.99■■□□□ 1.59
TSKU-202ENST00000525167 FAM98CQ17RN3 349 aaKnown RBP24.99■■□□□ 1.59
TSKU-202ENST00000525167 DEFB132Q7Z7B7 95 aa24.99■■□□□ 1.59
TSKU-202ENST00000525167 A0A0G2JS52 829 aa24.98■■□□□ 1.59
TSKU-202ENST00000525167 MYT1Q01538 1121 aa24.98■■□□□ 1.59
TSKU-202ENST00000525167 SPATA31A5Q5VU36 1347 aa24.97■■□□□ 1.59
TSKU-202ENST00000525167 SPATA31A7Q8IWB4 1347 aa24.97■■□□□ 1.59
TSKU-202ENST00000525167 PRDM11Q9NQV5 511 aa24.96■■□□□ 1.59
TSKU-202ENST00000525167 POLR3AO14802 1390 aaPredicted RBP24.95■■□□□ 1.59
TSKU-202ENST00000525167 TOPAZ1Q8N9V7 1692 aa24.95■■□□□ 1.58
TSKU-202ENST00000525167 BAG6P46379 1132 aa24.94■■□□□ 1.58
TSKU-202ENST00000525167 CDK19Q9BWU1 502 aa24.94■■□□□ 1.58
TSKU-202ENST00000525167 THSD7AQ9UPZ6 1657 aa24.94■■□□□ 1.58
TSKU-202ENST00000525167 PHRF1Q9P1Y6 1649 aaKnown RBP24.94■■□□□ 1.58
TSKU-202ENST00000525167 CCDC61Q9Y6R9 512 aa24.93■■□□□ 1.58
TSKU-202ENST00000525167 KIAA0232Q92628 1395 aa24.92■■□□□ 1.58
TSKU-202ENST00000525167 RGPD1P0DJD0 1748 aa24.9■■□□□ 1.58
TSKU-202ENST00000525167 PLEKHG3A1L390 1219 aa24.9■■□□□ 1.58
TSKU-202ENST00000525167 ACEP12821 1306 aa24.89■■□□□ 1.58
TSKU-202ENST00000525167 SPATA31A1Q5TZJ5 1347 aa24.88■■□□□ 1.57
TSKU-202ENST00000525167 NBPF8Q3BBV2 869 aa24.88■■□□□ 1.57
TSKU-202ENST00000525167 LRP5O75197 1615 aa24.87■■□□□ 1.57
TSKU-202ENST00000525167 DISP2A7MBM2 1401 aa24.86■■□□□ 1.57
TSKU-202ENST00000525167 BRD4O60885 1362 aaPredicted RBP24.84■■□□□ 1.57
TSKU-202ENST00000525167 NRKQ7Z2Y5 1582 aa24.84■■□□□ 1.57
TSKU-202ENST00000525167 CPDO75976 1380 aa24.83■■□□□ 1.57
TSKU-202ENST00000525167 ZC3H6P61129 1189 aaKnown RBP24.83■■□□□ 1.57
TSKU-202ENST00000525167 CHRNA2Q15822 529 aa24.83■■□□□ 1.57
TSKU-202ENST00000525167 USP19O94966 1318 aa24.83■■□□□ 1.56
TSKU-202ENST00000525167 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
TSKU-202ENST00000525167 CENPJQ9HC77 1338 aaPredicted RBP24.82■■□□□ 1.56
TSKU-202ENST00000525167 TNS1Q9HBL0 1735 aaKnown RBP24.81■■□□□ 1.56
TSKU-202ENST00000525167 SSH2Q76I76 1423 aa24.81■■□□□ 1.56
TSKU-202ENST00000525167 ABTB2Q8N961 1025 aa24.81■■□□□ 1.56
TSKU-202ENST00000525167 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
TSKU-202ENST00000525167 PPIP5K1Q6PFW1 1433 aa24.8■■□□□ 1.56
TSKU-202ENST00000525167 NUTM2GQ5VZR2 741 aa24.8■■□□□ 1.56
TSKU-202ENST00000525167 BARGINQ6ZT62 677 aa24.8■■□□□ 1.56
TSKU-202ENST00000525167 SRPK2P78362 688 aaKnown RBP24.79■■□□□ 1.56
TSKU-202ENST00000525167 FAM182BQ5T319 152 aa24.79■■□□□ 1.56
TSKU-202ENST00000525167 FAM196AQ6ZSG2 479 aa24.79■■□□□ 1.56
TSKU-202ENST00000525167 LMO7Q8WWI1 1683 aa24.78■■□□□ 1.56
TSKU-202ENST00000525167 EVA1CP58658 441 aa24.78■■□□□ 1.56
TSKU-202ENST00000525167 EN1Q05925 392 aaPredicted RBP24.78■■□□□ 1.56
TSKU-202ENST00000525167 NLRP13Q86W25 1043 aa24.78■■□□□ 1.56
TSKU-202ENST00000525167 CAMTA1Q9Y6Y1 1673 aa24.77■■□□□ 1.56
TSKU-202ENST00000525167 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
TSKU-202ENST00000525167 PARD3Q8TEW0 1356 aa24.75■■□□□ 1.55
TSKU-202ENST00000525167 PSDA5PKW4 1024 aaPredicted RBP24.74■■□□□ 1.55
TSKU-202ENST00000525167 THRAP3Q9Y2W1 955 aaKnown RBP24.74■■□□□ 1.55
TSKU-202ENST00000525167 GCP02774 474 aa24.73■■□□□ 1.55
TSKU-202ENST00000525167 TCP11L2Q8N4U5 519 aa24.73■■□□□ 1.55
TSKU-202ENST00000525167 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
TSKU-202ENST00000525167 USP35Q9P2H5 1018 aa24.72■■□□□ 1.55
TSKU-202ENST00000525167 USP6P35125 1406 aa24.71■■□□□ 1.55
TSKU-202ENST00000525167 PDE3BQ13370 1112 aa24.71■■□□□ 1.55
TSKU-202ENST00000525167 LARP1Q6PKG0 1096 aaKnown RBP24.71■■□□□ 1.55
TSKU-202ENST00000525167 COL5A2P05997 1499 aaPredicted RBP24.7■■□□□ 1.55
TSKU-202ENST00000525167 TRIM37O94972 964 aa24.7■■□□□ 1.54
TSKU-202ENST00000525167 CAMKK2Q96RR4 588 aa24.7■■□□□ 1.54
TSKU-202ENST00000525167 EZH2Q15910 746 aaKnown RBP24.69■■□□□ 1.54
TSKU-202ENST00000525167 SLIT3O75094 1523 aa24.68■■□□□ 1.54
TSKU-202ENST00000525167 C11orf95C9JLR9 678 aaPredicted RBP24.68■■□□□ 1.54
TSKU-202ENST00000525167 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
TSKU-202ENST00000525167 R3HDM1Q15032 1099 aaKnown RBP24.67■■□□□ 1.54
TSKU-202ENST00000525167 CABP1Q9NZU7 370 aa24.67■■□□□ 1.54
TSKU-202ENST00000525167 PARP4Q9UKK3 1724 aaKnown RBP24.66■■□□□ 1.54
TSKU-202ENST00000525167 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
TSKU-202ENST00000525167 TRPM1Q7Z4N2 1603 aa24.66■■□□□ 1.54
TSKU-202ENST00000525167 APBA3O96018 575 aa24.66■■□□□ 1.54
TSKU-202ENST00000525167 CRB1P82279 1406 aa24.66■■□□□ 1.54
TSKU-202ENST00000525167 AATKQ6ZMQ8 1374 aa24.66■■□□□ 1.54
TSKU-202ENST00000525167 NLRP6P59044 892 aa24.64■■□□□ 1.54
TSKU-202ENST00000525167 RREB1Q92766 1687 aa24.63■■□□□ 1.53
TSKU-202ENST00000525167 PIK3C2AO00443 1686 aa24.62■■□□□ 1.53
TSKU-202ENST00000525167 ZNF692Q9BU19 519 aaPredicted RBP24.61■■□□□ 1.53
TSKU-202ENST00000525167 ROCK2O75116 1388 aaKnown RBP24.59■■□□□ 1.53
TSKU-202ENST00000525167 OVOS2A0A0G2JMS6 1433 aa24.59■■□□□ 1.53
TSKU-202ENST00000525167 OVOS2A0A0J9YW53 1432 aa24.59■■□□□ 1.53
TSKU-202ENST00000525167 OVOS2Q6IE36 1432 aa24.59■■□□□ 1.53
TSKU-202ENST00000525167 NUP188Q5SRE5 1749 aa24.58■■□□□ 1.52
TSKU-202ENST00000525167 COL18A1P39060 1754 aa24.57■■□□□ 1.52
TSKU-202ENST00000525167 CPSF1Q10570 1443 aaKnown RBP24.56■■□□□ 1.52
TSKU-202ENST00000525167 NBPF14Q5TI25 921 aa24.56■■□□□ 1.52
TSKU-202ENST00000525167 KCNH5Q8NCM2 988 aa24.56■■□□□ 1.52
TSKU-202ENST00000525167 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
TSKU-202ENST00000525167 PEAK1Q9H792 1746 aa24.55■■□□□ 1.52
TSKU-202ENST00000525167 LRRC37A3O60309 1634 aa24.55■■□□□ 1.52
TSKU-202ENST00000525167 TTC21BQ7Z4L5 1316 aa24.55■■□□□ 1.52
TSKU-202ENST00000525167 WDR17Q8IZU2 1322 aa24.55■■□□□ 1.52
TSKU-202ENST00000525167 AKAP12Q02952 1782 aa24.54■■□□□ 1.52
TSKU-202ENST00000525167 ZBTB7CA1YPR0 619 aa24.54■■□□□ 1.52
TSKU-202ENST00000525167 SIN3AQ96ST3 1273 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms