RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MTMR2Q13614 643 aa8□□□□□ -1.13
USP47-204ENST00000525078 NPAS4Q8IUM7 802 aa8□□□□□ -1.13
USP47-204ENST00000525078 FAM200AQ8TCP9 573 aa8□□□□□ -1.13
USP47-204ENST00000525078 EYA1Q99502 592 aa8□□□□□ -1.13
USP47-204ENST00000525078 USP17L3A6NCW0 530 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 USP17L4A6NCW7 530 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 HOXA2O43364 376 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 LARP1Q6PKG0 1096 aaKnown RBP7.99□□□□□ -1.13
USP47-204ENST00000525078 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 USP17L1Q7RTZ2 530 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 ANKRD13AQ8IZ07 590 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
USP47-204ENST00000525078 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L21D6R901 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 SKIP12755 728 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 NR6A1Q15406 480 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 HCSTQ9UBK5 93 aa7.98□□□□□ -1.13
USP47-204ENST00000525078 FAM196BA6NMK8 535 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 FOSBP53539 338 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 TSNAXIP1Q2TAA8 658 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 CLP1Q92989 425 aaKnown RBP7.97□□□□□ -1.13
USP47-204ENST00000525078 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
USP47-204ENST00000525078 ANKRD62A6NC57 917 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 USP17L5A8MUK1 530 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 C6orf229H3BNL8 230 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 GUCA2AQ02747 115 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 ADGRD1Q6QNK2 874 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 DEPDC4Q8N2C3 294 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 NFATC2IPQ8NCF5 419 aa7.96□□□□□ -1.14
USP47-204ENST00000525078 CFAP99D6REC4 459 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 ABL1P00519 1130 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 RASA1P20936 1047 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 ERCC5P28715 1186 aaPredicted RBP7.95□□□□□ -1.14
USP47-204ENST00000525078 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
USP47-204ENST00000525078 NUDT18Q6ZVK8 323 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 CDCA7Q9BWT1 371 aaPredicted RBP7.95□□□□□ -1.14
USP47-204ENST00000525078 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 CWC22Q9HCG8 908 aaKnown RBP7.95□□□□□ -1.14
USP47-204ENST00000525078 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 MKRN1Q9UHC7 482 aaKnown RBP7.95□□□□□ -1.14
USP47-204ENST00000525078 CADPSQ9ULU8 1353 aa7.95□□□□□ -1.14
USP47-204ENST00000525078 RECKO95980 971 aa7.94□□□□□ -1.14
USP47-204ENST00000525078 NR1H3Q13133 447 aa7.94□□□□□ -1.14
USP47-204ENST00000525078 PLEKHM2Q8IWE5 1019 aa7.94□□□□□ -1.14
USP47-204ENST00000525078 FAM198AQ9UFP1 575 aa7.94□□□□□ -1.14
USP47-204ENST00000525078 PSDA5PKW4 1024 aaPredicted RBP7.93□□□□□ -1.14
USP47-204ENST00000525078 HRO43593 1189 aa7.93□□□□□ -1.14
USP47-204ENST00000525078 MAPK1P28482 360 aa7.93□□□□□ -1.14
USP47-204ENST00000525078 GCGRP47871 477 aa7.93□□□□□ -1.14
USP47-204ENST00000525078 TAGLNQ01995 201 aaKnown RBP7.93□□□□□ -1.14
USP47-204ENST00000525078 HLA-CQ95604 372 aa7.93□□□□□ -1.14
USP47-204ENST00000525078 ADAM33Q9BZ11 813 aa7.93□□□□□ -1.14
USP47-204ENST00000525078 NBPF26B4DH59 902 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 TK2O00142 265 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 SCNN1AP37088 669 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 FAM69CQ0P6D2 419 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 PTK7Q13308 1070 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
USP47-204ENST00000525078 ATP5J2-PTCD1G3V325 749 aa7.91□□□□□ -1.14
USP47-204ENST00000525078 H3BRB1 525 aa7.91□□□□□ -1.14
USP47-204ENST00000525078 PSEN2P49810 448 aa7.91□□□□□ -1.14
USP47-204ENST00000525078 FBXO33Q7Z6M2 555 aa7.91□□□□□ -1.14
USP47-204ENST00000525078 ANKMY2Q8IV38 441 aa7.91□□□□□ -1.14
USP47-204ENST00000525078 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
USP47-204ENST00000525078 TUT1Q9H6E5 874 aaKnown RBP7.91□□□□□ -1.14
USP47-204ENST00000525078 ARID4BQ4LE39 1312 aaPredicted RBP7.9□□□□□ -1.14
USP47-204ENST00000525078 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
USP47-204ENST00000525078 ZSCAN29Q8IWY8 852 aaPredicted RBP7.9□□□□□ -1.14
USP47-204ENST00000525078 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 FBXO45P0C2W1 286 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
USP47-204ENST00000525078 SWI5Q1ZZU3 235 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 TATDN2Q93075 761 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 ANO2Q9NQ90 1003 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
USP47-204ENST00000525078 DPYDQ12882 1025 aa7.88□□□□□ -1.15
USP47-204ENST00000525078 NCOA4Q13772 614 aa7.88□□□□□ -1.15
USP47-204ENST00000525078 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
USP47-204ENST00000525078 EAPPQ56P03 285 aaPredicted RBP7.88□□□□□ -1.15
USP47-204ENST00000525078 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
USP47-204ENST00000525078 EGFL7Q9UHF1 273 aa7.88□□□□□ -1.15
USP47-204ENST00000525078 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms