RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 LRRC7Q96NW7 1537 aa9.83□□□□□ -0.84
CASP4-204ENST00000524843 CDK19Q9BWU1 502 aa9.83□□□□□ -0.84
CASP4-204ENST00000524843 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
CASP4-204ENST00000524843 PPIP5K1Q6PFW1 1433 aa9.82□□□□□ -0.84
CASP4-204ENST00000524843 WASLO00401 505 aaPredicted RBP9.82□□□□□ -0.84
CASP4-204ENST00000524843 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
CASP4-204ENST00000524843 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
CASP4-204ENST00000524843 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
CASP4-204ENST00000524843 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
CASP4-204ENST00000524843 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
CASP4-204ENST00000524843 E9PSI1 815 aa9.81□□□□□ -0.84
CASP4-204ENST00000524843 MKRN4PQ13434 485 aaPredicted RBP9.81□□□□□ -0.84
CASP4-204ENST00000524843 NALCNQ8IZF0 1738 aa9.81□□□□□ -0.84
CASP4-204ENST00000524843 AATKQ6ZMQ8 1374 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 PNPLA6Q8IY17 1366 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.8□□□□□ -0.84
CASP4-204ENST00000524843 CCDC27Q2M243 656 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.8□□□□□ -0.84
CASP4-204ENST00000524843 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 SETD1BQ9UPS6 1966 aaKnown RBP9.8□□□□□ -0.84
CASP4-204ENST00000524843 ANKARQ7Z5J8 1434 aa9.8□□□□□ -0.84
CASP4-204ENST00000524843 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
CASP4-204ENST00000524843 MTHFSP49914 203 aa9.79□□□□□ -0.84
CASP4-204ENST00000524843 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
CASP4-204ENST00000524843 USP54Q70EL1 1684 aa9.79□□□□□ -0.84
CASP4-204ENST00000524843 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
CASP4-204ENST00000524843 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
CASP4-204ENST00000524843 TRMT2AQ8IZ69 625 aaKnown RBP9.78□□□□□ -0.84
CASP4-204ENST00000524843 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
CASP4-204ENST00000524843 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
CASP4-204ENST00000524843 FMN2Q9NZ56 1722 aa9.78□□□□□ -0.84
CASP4-204ENST00000524843 PTPRUQ92729 1446 aa9.77□□□□□ -0.85
CASP4-204ENST00000524843 FYB1O15117 783 aa9.77□□□□□ -0.85
CASP4-204ENST00000524843 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
CASP4-204ENST00000524843 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
CASP4-204ENST00000524843 CABP1Q9NZU7 370 aa9.77□□□□□ -0.85
CASP4-204ENST00000524843 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
CASP4-204ENST00000524843 APAF1O14727 1248 aa9.76□□□□□ -0.85
CASP4-204ENST00000524843 LTKP29376 864 aa9.76□□□□□ -0.85
CASP4-204ENST00000524843 WAPLQ7Z5K2 1190 aa9.76□□□□□ -0.85
CASP4-204ENST00000524843 WDR63Q8IWG1 891 aa9.76□□□□□ -0.85
CASP4-204ENST00000524843 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
CASP4-204ENST00000524843 NWD1Q149M9 1564 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 CHD2O14647 1828 aaKnown RBP9.75□□□□□ -0.85
CASP4-204ENST00000524843 MAP2P11137 1827 aaKnown RBP9.75□□□□□ -0.85
CASP4-204ENST00000524843 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 CDCA7LQ96GN5 454 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 CCDC136Q96JN2 1154 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
CASP4-204ENST00000524843 SALL2Q9Y467 1007 aaPredicted RBP9.75□□□□□ -0.85
CASP4-204ENST00000524843 OVOS2A0A0J9YW53 1432 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 USP6P35125 1406 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 OVOS2Q6IE36 1432 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
CASP4-204ENST00000524843 CCDC146Q8IYE0 955 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 IL16Q14005 1332 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 TTC21AQ8NDW8 1320 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 MAPK8IP3Q9UPT6 1336 aa9.74□□□□□ -0.85
CASP4-204ENST00000524843 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
CASP4-204ENST00000524843 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
CASP4-204ENST00000524843 CEBPAP49715 358 aaPredicted RBP9.73□□□□□ -0.85
CASP4-204ENST00000524843 WWC1Q8IX03 1113 aa9.73□□□□□ -0.85
CASP4-204ENST00000524843 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
CASP4-204ENST00000524843 NEFMP07197 916 aa9.72□□□□□ -0.85
CASP4-204ENST00000524843 U2AF1L5P0DN76 240 aaPredicted RBP9.72□□□□□ -0.85
CASP4-204ENST00000524843 U2AF1Q01081 240 aaKnown RBP eCLIP9.72□□□□□ -0.85
CASP4-204ENST00000524843 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
CASP4-204ENST00000524843 COG3Q96JB2 828 aa9.72□□□□□ -0.85
CASP4-204ENST00000524843 RBM42Q9BTD8 480 aaKnown RBP9.72□□□□□ -0.85
CASP4-204ENST00000524843 PRR36Q9H6K5 1346 aa9.72□□□□□ -0.85
CASP4-204ENST00000524843 SSH2Q76I76 1423 aa9.72□□□□□ -0.85
CASP4-204ENST00000524843 AAMPQ13685 434 aa9.71□□□□□ -0.86
CASP4-204ENST00000524843 USP31Q70CQ4 1352 aa9.71□□□□□ -0.86
CASP4-204ENST00000524843 FCHSD2O94868 740 aa9.7□□□□□ -0.86
CASP4-204ENST00000524843 B4GALNT3Q6L9W6 998 aa9.7□□□□□ -0.86
CASP4-204ENST00000524843 AMOTL2Q9Y2J4 779 aa9.7□□□□□ -0.86
CASP4-204ENST00000524843 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
CASP4-204ENST00000524843 ADGRL3Q9HAR2 1447 aa9.7□□□□□ -0.86
CASP4-204ENST00000524843 RGPD1P0DJD0 1748 aa9.69□□□□□ -0.86
CASP4-204ENST00000524843 CALD1Q05682 793 aaKnown RBP9.69□□□□□ -0.86
CASP4-204ENST00000524843 TTC21BQ7Z4L5 1316 aa9.69□□□□□ -0.86
CASP4-204ENST00000524843 ANKLE2Q86XL3 938 aa9.69□□□□□ -0.86
CASP4-204ENST00000524843 PLEKHF1Q96S99 279 aa9.69□□□□□ -0.86
CASP4-204ENST00000524843 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 NPHP4O75161 1426 aaPredicted RBP9.68□□□□□ -0.86
CASP4-204ENST00000524843 ACEP12821 1306 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 LMOD3Q0VAK6 560 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.68□□□□□ -0.86
CASP4-204ENST00000524843 SLC26A8Q96RN1 970 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
CASP4-204ENST00000524843 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
CASP4-204ENST00000524843 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
CASP4-204ENST00000524843 NME9Q86XW9 330 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms