RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
CNKSR1-209ENST00000524529 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
CNKSR1-209ENST00000524529 CDK19Q9BWU1 502 aa14.03□□□□□ -0.16
CNKSR1-209ENST00000524529 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
CNKSR1-209ENST00000524529 NGDNQ8NEJ9 315 aaKnown RBP14.02□□□□□ -0.17
CNKSR1-209ENST00000524529 BTG4Q9NY30 223 aa14.01□□□□□ -0.17
CNKSR1-209ENST00000524529 POLR3AO14802 1390 aaPredicted RBP14□□□□□ -0.17
CNKSR1-209ENST00000524529 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
CNKSR1-209ENST00000524529 QRICH2Q9H0J4 1663 aa13.99□□□□□ -0.17
CNKSR1-209ENST00000524529 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
CNKSR1-209ENST00000524529 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
CNKSR1-209ENST00000524529 BLMP54132 1417 aaPredicted RBP13.98□□□□□ -0.17
CNKSR1-209ENST00000524529 ACEP12821 1306 aa13.98□□□□□ -0.17
CNKSR1-209ENST00000524529 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
CNKSR1-209ENST00000524529 THSD7AQ9UPZ6 1657 aa13.98□□□□□ -0.17
CNKSR1-209ENST00000524529 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 L3MBTL2Q969R5 705 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
CNKSR1-209ENST00000524529 KIAA0232Q92628 1395 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 NRKQ7Z2Y5 1582 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 CHRNA2Q15822 529 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
CNKSR1-209ENST00000524529 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
CNKSR1-209ENST00000524529 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-209ENST00000524529 LRP5O75197 1615 aa13.94□□□□□ -0.18
CNKSR1-209ENST00000524529 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
CNKSR1-209ENST00000524529 LMO7Q8WWI1 1683 aa13.94□□□□□ -0.18
CNKSR1-209ENST00000524529 PPIP5K1Q6PFW1 1433 aa13.93□□□□□ -0.18
CNKSR1-209ENST00000524529 ZC3H6P61129 1189 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-209ENST00000524529 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
CNKSR1-209ENST00000524529 USP19O94966 1318 aa13.92□□□□□ -0.18
CNKSR1-209ENST00000524529 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
CNKSR1-209ENST00000524529 A0A0G2JS52 829 aa13.92□□□□□ -0.18
CNKSR1-209ENST00000524529 MYT1Q01538 1121 aa13.92□□□□□ -0.18
CNKSR1-209ENST00000524529 SPATA31A1Q5TZJ5 1347 aa13.91□□□□□ -0.18
CNKSR1-209ENST00000524529 TNS1Q9HBL0 1735 aaKnown RBP13.91□□□□□ -0.18
CNKSR1-209ENST00000524529 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
CNKSR1-209ENST00000524529 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
CNKSR1-209ENST00000524529 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
CNKSR1-209ENST00000524529 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
CNKSR1-209ENST00000524529 CPDO75976 1380 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 USP6P35125 1406 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 SSH2Q76I76 1423 aa13.89□□□□□ -0.19
CNKSR1-209ENST00000524529 AKAP12Q02952 1782 aa13.88□□□□□ -0.19
CNKSR1-209ENST00000524529 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
CNKSR1-209ENST00000524529 COL18A1P39060 1754 aa13.87□□□□□ -0.19
CNKSR1-209ENST00000524529 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
CNKSR1-209ENST00000524529 SLIT3O75094 1523 aa13.86□□□□□ -0.19
CNKSR1-209ENST00000524529 GCP02774 474 aa13.86□□□□□ -0.19
CNKSR1-209ENST00000524529 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
CNKSR1-209ENST00000524529 RGPD5Q99666 1765 aa13.86□□□□□ -0.19
CNKSR1-209ENST00000524529 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
CNKSR1-209ENST00000524529 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
CNKSR1-209ENST00000524529 NLRP13Q86W25 1043 aa13.85□□□□□ -0.19
CNKSR1-209ENST00000524529 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
CNKSR1-209ENST00000524529 COL5A2P05997 1499 aaPredicted RBP13.85□□□□□ -0.19
CNKSR1-209ENST00000524529 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
CNKSR1-209ENST00000524529 BARGINQ6ZT62 677 aa13.84□□□□□ -0.19
CNKSR1-209ENST00000524529 DISP2A7MBM2 1401 aa13.83□□□□□ -0.2
CNKSR1-209ENST00000524529 BAG6P46379 1132 aa13.83□□□□□ -0.2
CNKSR1-209ENST00000524529 PARP4Q9UKK3 1724 aaKnown RBP13.83□□□□□ -0.2
CNKSR1-209ENST00000524529 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
CNKSR1-209ENST00000524529 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
CNKSR1-209ENST00000524529 EVA1CP58658 441 aa13.82□□□□□ -0.2
CNKSR1-209ENST00000524529 NLRP6P59044 892 aa13.82□□□□□ -0.2
CNKSR1-209ENST00000524529 WNK3Q9BYP7 1800 aa13.81□□□□□ -0.2
CNKSR1-209ENST00000524529 PSDA5PKW4 1024 aaPredicted RBP13.81□□□□□ -0.2
CNKSR1-209ENST00000524529 TRIM37O94972 964 aa13.81□□□□□ -0.2
CNKSR1-209ENST00000524529 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
CNKSR1-209ENST00000524529 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
CNKSR1-209ENST00000524529 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
CNKSR1-209ENST00000524529 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
CNKSR1-209ENST00000524529 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
CNKSR1-209ENST00000524529 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
CNKSR1-209ENST00000524529 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
CNKSR1-209ENST00000524529 RREB1Q92766 1687 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 FAM196AQ6ZSG2 479 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 CAMKK2Q96RR4 588 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 CRB1P82279 1406 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 CD163L1Q9NR16 1453 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
CNKSR1-209ENST00000524529 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
CNKSR1-209ENST00000524529 SBNO2Q9Y2G9 1366 aa13.78□□□□□ -0.2
CNKSR1-209ENST00000524529 NFAT5O94916 1531 aa13.78□□□□□ -0.2
CNKSR1-209ENST00000524529 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
CNKSR1-209ENST00000524529 THRAP3Q9Y2W1 955 aaKnown RBP13.77□□□□□ -0.21
CNKSR1-209ENST00000524529 USP54Q70EL1 1684 aa13.76□□□□□ -0.21
CNKSR1-209ENST00000524529 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms