RNA–Protein interactions for RNA: ENST00000524510.1

NECTIN1-205, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 5

Gene NECTIN1, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-205ENST00000524510 TRPM3Q9HCF6 1732 aaPredicted RBP18.99■□□□□ 0.63
NECTIN1-205ENST00000524510 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
NECTIN1-205ENST00000524510 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
NECTIN1-205ENST00000524510 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
NECTIN1-205ENST00000524510 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
NECTIN1-205ENST00000524510 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
NECTIN1-205ENST00000524510 EP400Q96L91 3159 aa18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 A0A0G2JS52 829 aa18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 MYT1Q01538 1121 aa18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 SF3B2Q13435 895 aaKnown RBP18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 ARHGEF28Q8N1W1 1705 aaKnown RBP18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
NECTIN1-205ENST00000524510 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
NECTIN1-205ENST00000524510 NWD2Q9ULI1 1742 aa18.95■□□□□ 0.62
NECTIN1-205ENST00000524510 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
NECTIN1-205ENST00000524510 KIAA0232Q92628 1395 aa18.94■□□□□ 0.62
NECTIN1-205ENST00000524510 ABCA3Q99758 1704 aa18.94■□□□□ 0.62
NECTIN1-205ENST00000524510 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
NECTIN1-205ENST00000524510 DEFB132Q7Z7B7 95 aa18.94■□□□□ 0.62
NECTIN1-205ENST00000524510 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
NECTIN1-205ENST00000524510 CHRNA2Q15822 529 aa18.93■□□□□ 0.62
NECTIN1-205ENST00000524510 ABTB2Q8N961 1025 aa18.93■□□□□ 0.62
NECTIN1-205ENST00000524510 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
NECTIN1-205ENST00000524510 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
NECTIN1-205ENST00000524510 KIAA1210Q9ULL0 1709 aa18.92■□□□□ 0.62
NECTIN1-205ENST00000524510 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
NECTIN1-205ENST00000524510 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.62
NECTIN1-205ENST00000524510 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
NECTIN1-205ENST00000524510 STRN4Q9NRL3 753 aa18.89■□□□□ 0.61
NECTIN1-205ENST00000524510 SPATA31A1Q5TZJ5 1347 aa18.89■□□□□ 0.61
NECTIN1-205ENST00000524510 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
NECTIN1-205ENST00000524510 EVA1CP58658 441 aa18.88■□□□□ 0.61
NECTIN1-205ENST00000524510 NLRP13Q86W25 1043 aa18.88■□□□□ 0.61
NECTIN1-205ENST00000524510 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
NECTIN1-205ENST00000524510 USP19O94966 1318 aa18.87■□□□□ 0.61
NECTIN1-205ENST00000524510 NRAPQ86VF7 1730 aa18.87■□□□□ 0.61
NECTIN1-205ENST00000524510 ITSN1Q15811 1721 aa18.86■□□□□ 0.61
NECTIN1-205ENST00000524510 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
NECTIN1-205ENST00000524510 GCP02774 474 aa18.86■□□□□ 0.61
NECTIN1-205ENST00000524510 FAM182BQ5T319 152 aa18.86■□□□□ 0.61
NECTIN1-205ENST00000524510 CPDO75976 1380 aa18.85■□□□□ 0.61
NECTIN1-205ENST00000524510 EVC2Q86UK5 1308 aa18.85■□□□□ 0.61
NECTIN1-205ENST00000524510 BAG6P46379 1132 aa18.85■□□□□ 0.61
NECTIN1-205ENST00000524510 BRWD3Q6RI45 1802 aa18.85■□□□□ 0.61
NECTIN1-205ENST00000524510 CRYBG1Q9Y4K1 1723 aa18.83■□□□□ 0.61
NECTIN1-205ENST00000524510 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
NECTIN1-205ENST00000524510 BARGINQ6ZT62 677 aa18.83■□□□□ 0.6
NECTIN1-205ENST00000524510 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
NECTIN1-205ENST00000524510 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
NECTIN1-205ENST00000524510 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
NECTIN1-205ENST00000524510 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
NECTIN1-205ENST00000524510 NLRP6P59044 892 aa18.81■□□□□ 0.6
NECTIN1-205ENST00000524510 USP6P35125 1406 aa18.81■□□□□ 0.6
NECTIN1-205ENST00000524510 FAM196AQ6ZSG2 479 aa18.8■□□□□ 0.6
NECTIN1-205ENST00000524510 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
NECTIN1-205ENST00000524510 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
NECTIN1-205ENST00000524510 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
NECTIN1-205ENST00000524510 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
NECTIN1-205ENST00000524510 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
NECTIN1-205ENST00000524510 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
NECTIN1-205ENST00000524510 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
NECTIN1-205ENST00000524510 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
NECTIN1-205ENST00000524510 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
NECTIN1-205ENST00000524510 TRIM37O94972 964 aa18.76■□□□□ 0.59
NECTIN1-205ENST00000524510 AATKQ6ZMQ8 1374 aa18.75■□□□□ 0.59
NECTIN1-205ENST00000524510 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
NECTIN1-205ENST00000524510 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
NECTIN1-205ENST00000524510 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
NECTIN1-205ENST00000524510 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
NECTIN1-205ENST00000524510 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
NECTIN1-205ENST00000524510 CAMKK2Q96RR4 588 aa18.73■□□□□ 0.59
NECTIN1-205ENST00000524510 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
NECTIN1-205ENST00000524510 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
NECTIN1-205ENST00000524510 APBA3O96018 575 aa18.72■□□□□ 0.59
NECTIN1-205ENST00000524510 EZH2Q15910 746 aaKnown RBP18.72■□□□□ 0.59
NECTIN1-205ENST00000524510 KCNH5Q8NCM2 988 aa18.72■□□□□ 0.59
NECTIN1-205ENST00000524510 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
NECTIN1-205ENST00000524510 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
NECTIN1-205ENST00000524510 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
NECTIN1-205ENST00000524510 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
NECTIN1-205ENST00000524510 SLIT3O75094 1523 aa18.7■□□□□ 0.58
NECTIN1-205ENST00000524510 CRB1P82279 1406 aa18.7■□□□□ 0.58
NECTIN1-205ENST00000524510 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
NECTIN1-205ENST00000524510 ARHGEF25Q86VW2 580 aa18.7■□□□□ 0.58
NECTIN1-205ENST00000524510 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
NECTIN1-205ENST00000524510 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
NECTIN1-205ENST00000524510 C11orf95C9JLR9 678 aaPredicted RBP18.68■□□□□ 0.58
NECTIN1-205ENST00000524510 R3HDM1Q15032 1099 aaKnown RBP18.68■□□□□ 0.58
NECTIN1-205ENST00000524510 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
NECTIN1-205ENST00000524510 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
NECTIN1-205ENST00000524510 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
NECTIN1-205ENST00000524510 SOX12O15370 315 aa18.66■□□□□ 0.58
NECTIN1-205ENST00000524510 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
NECTIN1-205ENST00000524510 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
NECTIN1-205ENST00000524510 DDB1Q16531 1140 aa18.64■□□□□ 0.57
NECTIN1-205ENST00000524510 CDCA7Q9BWT1 371 aaPredicted RBP18.64■□□□□ 0.57
NECTIN1-205ENST00000524510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
NECTIN1-205ENST00000524510 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
NECTIN1-205ENST00000524510 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms