RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
SCUBE2-208ENST00000524317 APAF1O14727 1248 aa15.35■□□□□ 0.05
SCUBE2-208ENST00000524317 TMEM2Q9UHN6 1383 aa15.35■□□□□ 0.05
SCUBE2-208ENST00000524317 MTHFSP49914 203 aa15.35■□□□□ 0.05
SCUBE2-208ENST00000524317 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
SCUBE2-208ENST00000524317 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
SCUBE2-208ENST00000524317 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
SCUBE2-208ENST00000524317 DUSP27Q5VZP5 1158 aa15.33■□□□□ 0.05
SCUBE2-208ENST00000524317 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
SCUBE2-208ENST00000524317 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
SCUBE2-208ENST00000524317 SETD1AO15047 1707 aaKnown RBP15.32■□□□□ 0.04
SCUBE2-208ENST00000524317 CEBPAP49715 358 aaPredicted RBP15.32■□□□□ 0.04
SCUBE2-208ENST00000524317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCUBE2-208ENST00000524317 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 GGNBP2Q9H3C7 697 aa15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 FYB1O15117 783 aa15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 TXNDC2Q86VQ3 553 aa15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
SCUBE2-208ENST00000524317 NGEFQ8N5V2 710 aa15.3■□□□□ 0.04
SCUBE2-208ENST00000524317 NLRP1Q9C000 1473 aa15.3■□□□□ 0.04
SCUBE2-208ENST00000524317 TECPR2O15040 1411 aa15.29■□□□□ 0.04
SCUBE2-208ENST00000524317 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
SCUBE2-208ENST00000524317 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
SCUBE2-208ENST00000524317 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
SCUBE2-208ENST00000524317 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 WASLO00401 505 aaPredicted RBP15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 LTKP29376 864 aa15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 MED14O60244 1454 aa15.28■□□□□ 0.04
SCUBE2-208ENST00000524317 PLIN1O60240 522 aa15.27■□□□□ 0.04
SCUBE2-208ENST00000524317 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.03
SCUBE2-208ENST00000524317 SPOCK2Q92563 424 aa15.27■□□□□ 0.03
SCUBE2-208ENST00000524317 RUNDC1Q96C34 613 aa15.27■□□□□ 0.03
SCUBE2-208ENST00000524317 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
SCUBE2-208ENST00000524317 PLEKHG1Q9ULL1 1385 aa15.26■□□□□ 0.03
SCUBE2-208ENST00000524317 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
SCUBE2-208ENST00000524317 E9PSI1 815 aa15.26■□□□□ 0.03
SCUBE2-208ENST00000524317 WWC1Q8IX03 1113 aa15.25■□□□□ 0.03
SCUBE2-208ENST00000524317 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
SCUBE2-208ENST00000524317 ATP7BP35670 1465 aa15.25■□□□□ 0.03
SCUBE2-208ENST00000524317 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
SCUBE2-208ENST00000524317 TCP11L2Q8N4U5 519 aa15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 CPS1P31327 1500 aa15.23■□□□□ 0.03
SCUBE2-208ENST00000524317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
SCUBE2-208ENST00000524317 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.02
SCUBE2-208ENST00000524317 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.02
SCUBE2-208ENST00000524317 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 CRBNQ96SW2 442 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 SLC24A3Q9HC58 644 aa15.2■□□□□ 0.02
SCUBE2-208ENST00000524317 ARHGAP23Q9P227 1491 aa15.19■□□□□ 0.02
SCUBE2-208ENST00000524317 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
SCUBE2-208ENST00000524317 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
SCUBE2-208ENST00000524317 SLIT1O75093 1534 aa15.19■□□□□ 0.02
SCUBE2-208ENST00000524317 EDC4Q6P2E9 1401 aaKnown RBP15.19■□□□□ 0.02
SCUBE2-208ENST00000524317 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
SCUBE2-208ENST00000524317 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
SCUBE2-208ENST00000524317 PRR36Q9H6K5 1346 aa15.18■□□□□ 0.02
SCUBE2-208ENST00000524317 THEMISQ8N1K5 641 aaPredicted RBP15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 C3P01024 1663 aa15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
SCUBE2-208ENST00000524317 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 FBLN1P23142 703 aa15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 NME9Q86XW9 330 aa15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 TBX22Q9Y458 520 aa15.16■□□□□ 0.02
SCUBE2-208ENST00000524317 CDC42BPGQ6DT37 1551 aa15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 BCAR3O75815 825 aa15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 AMOTL2Q9Y2J4 779 aa15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 ANKRD26Q9UPS8 1709 aa15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
SCUBE2-208ENST00000524317 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
SCUBE2-208ENST00000524317 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
SCUBE2-208ENST00000524317 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
SCUBE2-208ENST00000524317 ADGRB2O60241 1585 aa15.12■□□□□ 0.01
SCUBE2-208ENST00000524317 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
SCUBE2-208ENST00000524317 APBB1O00213 710 aa15.12■□□□□ 0.01
SCUBE2-208ENST00000524317 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
SCUBE2-208ENST00000524317 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms