RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 BRWD3Q6RI45 1802 aa27.21■■□□□ 1.95
PTP4A3-206ENST00000524028 CCDC61Q9Y6R9 512 aa27.21■■□□□ 1.95
PTP4A3-206ENST00000524028 NRAPQ86VF7 1730 aa27.21■■□□□ 1.95
PTP4A3-206ENST00000524028 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
PTP4A3-206ENST00000524028 POLR3AO14802 1390 aaPredicted RBP27.21■■□□□ 1.95
PTP4A3-206ENST00000524028 ACEP12821 1306 aa27.2■■□□□ 1.95
PTP4A3-206ENST00000524028 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
PTP4A3-206ENST00000524028 BLMP54132 1417 aaPredicted RBP27.19■■□□□ 1.94
PTP4A3-206ENST00000524028 PLEKHG3A1L390 1219 aa27.19■■□□□ 1.94
PTP4A3-206ENST00000524028 NBPF8Q3BBV2 869 aa27.19■■□□□ 1.94
PTP4A3-206ENST00000524028 COL14A1Q05707 1796 aaKnown RBP27.19■■□□□ 1.94
PTP4A3-206ENST00000524028 FAM98CQ17RN3 349 aaKnown RBP27.18■■□□□ 1.94
PTP4A3-206ENST00000524028 KRT27Q7Z3Y8 459 aa27.18■■□□□ 1.94
PTP4A3-206ENST00000524028 L3MBTL2Q969R5 705 aa27.18■■□□□ 1.94
PTP4A3-206ENST00000524028 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
PTP4A3-206ENST00000524028 PRDM11Q9NQV5 511 aa27.17■■□□□ 1.94
PTP4A3-206ENST00000524028 TOPAZ1Q8N9V7 1692 aa27.17■■□□□ 1.94
PTP4A3-206ENST00000524028 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
PTP4A3-206ENST00000524028 CENPJQ9HC77 1338 aaPredicted RBP27.16■■□□□ 1.94
PTP4A3-206ENST00000524028 ZRANB1Q9UGI0 708 aa27.15■■□□□ 1.94
PTP4A3-206ENST00000524028 SPATA31A5Q5VU36 1347 aa27.15■■□□□ 1.94
PTP4A3-206ENST00000524028 SPATA31A7Q8IWB4 1347 aa27.15■■□□□ 1.94
PTP4A3-206ENST00000524028 KIAA0232Q92628 1395 aa27.14■■□□□ 1.94
PTP4A3-206ENST00000524028 DEFB132Q7Z7B7 95 aa27.14■■□□□ 1.94
PTP4A3-206ENST00000524028 A0A0G2JS52 829 aa27.13■■□□□ 1.93
PTP4A3-206ENST00000524028 MYT1Q01538 1121 aa27.13■■□□□ 1.93
PTP4A3-206ENST00000524028 CHRNA2Q15822 529 aa27.13■■□□□ 1.93
PTP4A3-206ENST00000524028 CABP2Q9NPB3 220 aa27.13■■□□□ 1.93
PTP4A3-206ENST00000524028 SRPK2P78362 688 aaKnown RBP27.12■■□□□ 1.93
PTP4A3-206ENST00000524028 ZC3H6P61129 1189 aaKnown RBP27.11■■□□□ 1.93
PTP4A3-206ENST00000524028 PPIP5K1Q6PFW1 1433 aa27.09■■□□□ 1.93
PTP4A3-206ENST00000524028 SRCAPQ6ZRS2 3230 aa27.09■■□□□ 1.93
PTP4A3-206ENST00000524028 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
PTP4A3-206ENST00000524028 ABTB2Q8N961 1025 aa27.08■■□□□ 1.93
PTP4A3-206ENST00000524028 SF3B2Q13435 895 aaKnown RBP27.07■■□□□ 1.92
PTP4A3-206ENST00000524028 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
PTP4A3-206ENST00000524028 FAM182BQ5T319 152 aa27.05■■□□□ 1.92
PTP4A3-206ENST00000524028 STRN4Q9NRL3 753 aa27.05■■□□□ 1.92
PTP4A3-206ENST00000524028 SPATA31A1Q5TZJ5 1347 aa27.05■■□□□ 1.92
PTP4A3-206ENST00000524028 USP19O94966 1318 aa27.04■■□□□ 1.92
PTP4A3-206ENST00000524028 QRICH2Q9H0J4 1663 aa27.03■■□□□ 1.92
PTP4A3-206ENST00000524028 CABP1Q9NZU7 370 aa27.03■■□□□ 1.92
PTP4A3-206ENST00000524028 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.92
PTP4A3-206ENST00000524028 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.92
PTP4A3-206ENST00000524028 TRPM1Q7Z4N2 1603 aa27■■□□□ 1.91
PTP4A3-206ENST00000524028 CPDO75976 1380 aa26.99■■□□□ 1.91
PTP4A3-206ENST00000524028 NLRP13Q86W25 1043 aa26.99■■□□□ 1.91
PTP4A3-206ENST00000524028 GCP02774 474 aa26.98■■□□□ 1.91
PTP4A3-206ENST00000524028 CAMTA1Q9Y6Y1 1673 aa26.98■■□□□ 1.91
PTP4A3-206ENST00000524028 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
PTP4A3-206ENST00000524028 EVA1CP58658 441 aa26.97■■□□□ 1.91
PTP4A3-206ENST00000524028 USP35Q9P2H5 1018 aa26.97■■□□□ 1.91
PTP4A3-206ENST00000524028 USP6P35125 1406 aa26.97■■□□□ 1.91
PTP4A3-206ENST00000524028 SSH2Q76I76 1423 aa26.97■■□□□ 1.91
PTP4A3-206ENST00000524028 EVC2Q86UK5 1308 aa26.96■■□□□ 1.91
PTP4A3-206ENST00000524028 LARP1Q6PKG0 1096 aaKnown RBP26.96■■□□□ 1.91
PTP4A3-206ENST00000524028 BRD4O60885 1362 aaPredicted RBP26.96■■□□□ 1.91
PTP4A3-206ENST00000524028 BAG6P46379 1132 aa26.95■■□□□ 1.9
PTP4A3-206ENST00000524028 LMO7Q8WWI1 1683 aa26.93■■□□□ 1.9
PTP4A3-206ENST00000524028 NLRP6P59044 892 aa26.92■■□□□ 1.9
PTP4A3-206ENST00000524028 BARGINQ6ZT62 677 aa26.92■■□□□ 1.9
PTP4A3-206ENST00000524028 EN1Q05925 392 aaPredicted RBP26.91■■□□□ 1.9
PTP4A3-206ENST00000524028 TCP11L2Q8N4U5 519 aa26.88■■□□□ 1.89
PTP4A3-206ENST00000524028 FAM196AQ6ZSG2 479 aa26.87■■□□□ 1.89
PTP4A3-206ENST00000524028 COL5A2P05997 1499 aaPredicted RBP26.87■■□□□ 1.89
PTP4A3-206ENST00000524028 SLIT3O75094 1523 aa26.86■■□□□ 1.89
PTP4A3-206ENST00000524028 ZBTB7CA1YPR0 619 aa26.86■■□□□ 1.89
PTP4A3-206ENST00000524028 TRIM37O94972 964 aa26.86■■□□□ 1.89
PTP4A3-206ENST00000524028 RGPD1P0DJD0 1748 aa26.85■■□□□ 1.89
PTP4A3-206ENST00000524028 PSDA5PKW4 1024 aaPredicted RBP26.85■■□□□ 1.89
PTP4A3-206ENST00000524028 DISP2A7MBM2 1401 aa26.84■■□□□ 1.89
PTP4A3-206ENST00000524028 ZNF692Q9BU19 519 aaPredicted RBP26.84■■□□□ 1.89
PTP4A3-206ENST00000524028 PIK3C2AO00443 1686 aa26.84■■□□□ 1.89
PTP4A3-206ENST00000524028 TTC21BQ7Z4L5 1316 aa26.84■■□□□ 1.89
PTP4A3-206ENST00000524028 AATKQ6ZMQ8 1374 aa26.84■■□□□ 1.89
PTP4A3-206ENST00000524028 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
PTP4A3-206ENST00000524028 THRAP3Q9Y2W1 955 aaKnown RBP26.83■■□□□ 1.89
PTP4A3-206ENST00000524028 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
PTP4A3-206ENST00000524028 EZH2Q15910 746 aaKnown RBP26.82■■□□□ 1.88
PTP4A3-206ENST00000524028 CPSF1Q10570 1443 aaKnown RBP26.81■■□□□ 1.88
PTP4A3-206ENST00000524028 CAMKK2Q96RR4 588 aa26.8■■□□□ 1.88
PTP4A3-206ENST00000524028 AXIN2Q9Y2T1 843 aa26.8■■□□□ 1.88
PTP4A3-206ENST00000524028 CRB1P82279 1406 aa26.8■■□□□ 1.88
PTP4A3-206ENST00000524028 CARD11Q9BXL7 1154 aa26.79■■□□□ 1.88
PTP4A3-206ENST00000524028 SBNO2Q9Y2G9 1366 aa26.77■■□□□ 1.88
PTP4A3-206ENST00000524028 APBA3O96018 575 aa26.77■■□□□ 1.88
PTP4A3-206ENST00000524028 KTN1Q86UP2 1357 aaKnown RBP26.76■■□□□ 1.87
PTP4A3-206ENST00000524028 TTC21AQ8NDW8 1320 aa26.76■■□□□ 1.87
PTP4A3-206ENST00000524028 ARHGEF25Q86VW2 580 aa26.76■■□□□ 1.87
PTP4A3-206ENST00000524028 COL18A1P39060 1754 aa26.76■■□□□ 1.87
PTP4A3-206ENST00000524028 AKAP12Q02952 1782 aa26.75■■□□□ 1.87
PTP4A3-206ENST00000524028 SOX12O15370 315 aa26.74■■□□□ 1.87
PTP4A3-206ENST00000524028 R3HDM1Q15032 1099 aaKnown RBP26.74■■□□□ 1.87
PTP4A3-206ENST00000524028 TOM1L2Q6ZVM7 507 aa26.74■■□□□ 1.87
PTP4A3-206ENST00000524028 KCNH5Q8NCM2 988 aa26.74■■□□□ 1.87
PTP4A3-206ENST00000524028 TONSLQ96HA7 1378 aa26.73■■□□□ 1.87
PTP4A3-206ENST00000524028 PARP4Q9UKK3 1724 aaKnown RBP26.72■■□□□ 1.87
PTP4A3-206ENST00000524028 WDR17Q8IZU2 1322 aa26.71■■□□□ 1.87
PTP4A3-206ENST00000524028 CD163L1Q9NR16 1453 aa26.71■■□□□ 1.87
PTP4A3-206ENST00000524028 LRP5O75197 1615 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms