RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
VEGFA-224ENST00000523873 USP6P35125 1406 aa17.95■□□□□ 0.46
VEGFA-224ENST00000523873 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
VEGFA-224ENST00000523873 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
VEGFA-224ENST00000523873 CPSF1Q10570 1443 aaKnown RBP17.93■□□□□ 0.46
VEGFA-224ENST00000523873 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
VEGFA-224ENST00000523873 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
VEGFA-224ENST00000523873 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
VEGFA-224ENST00000523873 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
VEGFA-224ENST00000523873 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
VEGFA-224ENST00000523873 C11orf95C9JLR9 678 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-224ENST00000523873 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
VEGFA-224ENST00000523873 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
VEGFA-224ENST00000523873 KTN1Q86UP2 1357 aaKnown RBP17.91■□□□□ 0.46
VEGFA-224ENST00000523873 SSH2Q76I76 1423 aa17.9■□□□□ 0.46
VEGFA-224ENST00000523873 ADAMTS2O95450 1211 aa17.9■□□□□ 0.46
VEGFA-224ENST00000523873 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
VEGFA-224ENST00000523873 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
VEGFA-224ENST00000523873 CDCA8Q53HL2 280 aa17.87■□□□□ 0.45
VEGFA-224ENST00000523873 HDGFL2Q7Z4V5 671 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-224ENST00000523873 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
VEGFA-224ENST00000523873 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-224ENST00000523873 TTC21BQ7Z4L5 1316 aa17.87■□□□□ 0.45
VEGFA-224ENST00000523873 PLCH1Q4KWH8 1693 aa17.87■□□□□ 0.45
VEGFA-224ENST00000523873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
VEGFA-224ENST00000523873 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-224ENST00000523873 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
VEGFA-224ENST00000523873 BRD4O60885 1362 aaPredicted RBP17.85■□□□□ 0.45
VEGFA-224ENST00000523873 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
VEGFA-224ENST00000523873 C8orf37Q96NL8 207 aa17.85■□□□□ 0.45
VEGFA-224ENST00000523873 TERF2IPQ9NYB0 399 aa17.85■□□□□ 0.45
VEGFA-224ENST00000523873 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
VEGFA-224ENST00000523873 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
VEGFA-224ENST00000523873 USP54Q70EL1 1684 aa17.83■□□□□ 0.45
VEGFA-224ENST00000523873 EDC4Q6P2E9 1401 aaKnown RBP17.83■□□□□ 0.45
VEGFA-224ENST00000523873 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-224ENST00000523873 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
VEGFA-224ENST00000523873 NME9Q86XW9 330 aa17.82■□□□□ 0.44
VEGFA-224ENST00000523873 NLRP6P59044 892 aa17.81■□□□□ 0.44
VEGFA-224ENST00000523873 SLIT3O75094 1523 aa17.81■□□□□ 0.44
VEGFA-224ENST00000523873 RGPD5Q99666 1765 aa17.81■□□□□ 0.44
VEGFA-224ENST00000523873 USP19O94966 1318 aa17.8■□□□□ 0.44
VEGFA-224ENST00000523873 AFF2P51816 1311 aa17.8■□□□□ 0.44
VEGFA-224ENST00000523873 TTC21AQ8NDW8 1320 aa17.8■□□□□ 0.44
VEGFA-224ENST00000523873 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
VEGFA-224ENST00000523873 COL14A1Q05707 1796 aaKnown RBP17.8■□□□□ 0.44
VEGFA-224ENST00000523873 LTN1O94822 1766 aa17.79■□□□□ 0.44
VEGFA-224ENST00000523873 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
VEGFA-224ENST00000523873 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
VEGFA-224ENST00000523873 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
VEGFA-224ENST00000523873 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
VEGFA-224ENST00000523873 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
VEGFA-224ENST00000523873 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
VEGFA-224ENST00000523873 SOX12O15370 315 aa17.77■□□□□ 0.44
VEGFA-224ENST00000523873 ZC3H6P61129 1189 aaKnown RBP17.77■□□□□ 0.44
VEGFA-224ENST00000523873 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
VEGFA-224ENST00000523873 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
VEGFA-224ENST00000523873 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
VEGFA-224ENST00000523873 POTEAQ6S8J7 498 aa17.76■□□□□ 0.43
VEGFA-224ENST00000523873 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
VEGFA-224ENST00000523873 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 WASHC2AQ641Q2 1341 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 PANK3Q9H999 370 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 NFAT5O94916 1531 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 COL18A1P39060 1754 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
VEGFA-224ENST00000523873 OVOS2A0A0J9YW53 1432 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 OVOS2Q6IE36 1432 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 SLIT2O94813 1529 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 GCP02774 474 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 USP21Q9UK80 565 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
VEGFA-224ENST00000523873 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
VEGFA-224ENST00000523873 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
VEGFA-224ENST00000523873 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-224ENST00000523873 FNBP4Q8N3X1 1017 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-224ENST00000523873 PRDM11Q9NQV5 511 aa17.72■□□□□ 0.43
VEGFA-224ENST00000523873 FYB1O15117 783 aa17.71■□□□□ 0.43
VEGFA-224ENST00000523873 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
VEGFA-224ENST00000523873 ILDR2Q71H61 639 aa17.7■□□□□ 0.42
VEGFA-224ENST00000523873 CAMTA1Q9Y6Y1 1673 aa17.7■□□□□ 0.42
VEGFA-224ENST00000523873 CPDO75976 1380 aa17.69■□□□□ 0.42
VEGFA-224ENST00000523873 FBLN1P23142 703 aa17.69■□□□□ 0.42
VEGFA-224ENST00000523873 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
VEGFA-224ENST00000523873 ATRNO75882 1429 aa17.69■□□□□ 0.42
VEGFA-224ENST00000523873 KCNH5Q8NCM2 988 aa17.68■□□□□ 0.42
VEGFA-224ENST00000523873 COG3Q96JB2 828 aa17.68■□□□□ 0.42
VEGFA-224ENST00000523873 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
VEGFA-224ENST00000523873 GLI3P10071 1580 aa17.67■□□□□ 0.42
VEGFA-224ENST00000523873 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
VEGFA-224ENST00000523873 TRPC5Q9UL62 973 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-224ENST00000523873 ARHGEF25Q86VW2 580 aa17.65■□□□□ 0.42
VEGFA-224ENST00000523873 STRN4Q9NRL3 753 aa17.65■□□□□ 0.42
VEGFA-224ENST00000523873 RGPD2P0DJD1 1756 aa17.65■□□□□ 0.42
VEGFA-224ENST00000523873 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
VEGFA-224ENST00000523873 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
VEGFA-224ENST00000523873 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
VEGFA-224ENST00000523873 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms