RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 RETREG3Q86VR2 466 aa10□□□□□ -0.81
PCM1-219ENST00000523540 DESI1Q6ICB0 168 aa9.99□□□□□ -0.81
PCM1-219ENST00000523540 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
PCM1-219ENST00000523540 ALDH1A1P00352 501 aa9.98□□□□□ -0.81
PCM1-219ENST00000523540 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
PCM1-219ENST00000523540 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
PCM1-219ENST00000523540 MTMR2Q13614 643 aa9.97□□□□□ -0.81
PCM1-219ENST00000523540 NPAS3Q8IXF0 933 aa9.97□□□□□ -0.81
PCM1-219ENST00000523540 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
PCM1-219ENST00000523540 ZBTB3Q9H5J0 574 aa9.97□□□□□ -0.81
PCM1-219ENST00000523540 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
PCM1-219ENST00000523540 NDUFV2P19404 249 aa9.96□□□□□ -0.82
PCM1-219ENST00000523540 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
PCM1-219ENST00000523540 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
PCM1-219ENST00000523540 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
PCM1-219ENST00000523540 LILRB3O75022 631 aa9.95□□□□□ -0.82
PCM1-219ENST00000523540 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
PCM1-219ENST00000523540 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
PCM1-219ENST00000523540 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
PCM1-219ENST00000523540 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
PCM1-219ENST00000523540 GMPRP36959 345 aa9.94□□□□□ -0.82
PCM1-219ENST00000523540 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
PCM1-219ENST00000523540 NUDT12Q9BQG2 462 aa9.94□□□□□ -0.82
PCM1-219ENST00000523540 BMP1P13497 986 aa9.93□□□□□ -0.82
PCM1-219ENST00000523540 CAPN5O15484 640 aaPredicted RBP9.92□□□□□ -0.82
PCM1-219ENST00000523540 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
PCM1-219ENST00000523540 H3BM21 787 aa9.91□□□□□ -0.82
PCM1-219ENST00000523540 C6orf229H3BNL8 230 aa9.91□□□□□ -0.82
PCM1-219ENST00000523540 HRCP23327 699 aa9.91□□□□□ -0.82
PCM1-219ENST00000523540 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
PCM1-219ENST00000523540 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
PCM1-219ENST00000523540 SH3BP2P78314 561 aa9.9□□□□□ -0.82
PCM1-219ENST00000523540 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
PCM1-219ENST00000523540 IRF7Q92985 503 aa9.9□□□□□ -0.82
PCM1-219ENST00000523540 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
PCM1-219ENST00000523540 PTPRNQ16849 979 aa9.88□□□□□ -0.83
PCM1-219ENST00000523540 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
PCM1-219ENST00000523540 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
PCM1-219ENST00000523540 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
PCM1-219ENST00000523540 SOCS7O14512 581 aa9.87□□□□□ -0.83
PCM1-219ENST00000523540 QPCTQ16769 361 aa9.87□□□□□ -0.83
PCM1-219ENST00000523540 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
PCM1-219ENST00000523540 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
PCM1-219ENST00000523540 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
PCM1-219ENST00000523540 VEGFBP49765 207 aa9.85□□□□□ -0.83
PCM1-219ENST00000523540 MPNDQ8N594 471 aa9.85□□□□□ -0.83
PCM1-219ENST00000523540 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
PCM1-219ENST00000523540 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
PCM1-219ENST00000523540 ZFP42Q96MM3 310 aa9.85□□□□□ -0.83
PCM1-219ENST00000523540 ATP1B4Q9UN42 357 aaPredicted RBP9.85□□□□□ -0.83
PCM1-219ENST00000523540 LYPD8Q6UX82 237 aa9.84□□□□□ -0.83
PCM1-219ENST00000523540 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
PCM1-219ENST00000523540 LOC100996750A0A140TA64 210 aa9.83□□□□□ -0.84
PCM1-219ENST00000523540 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
PCM1-219ENST00000523540 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
PCM1-219ENST00000523540 CFAP99D6REC4 459 aa9.83□□□□□ -0.84
PCM1-219ENST00000523540 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
PCM1-219ENST00000523540 NUTM2DQ5VT03 806 aaPredicted RBP9.83□□□□□ -0.84
PCM1-219ENST00000523540 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
PCM1-219ENST00000523540 KRTAP4-6Q9BYQ5 205 aa9.83□□□□□ -0.84
PCM1-219ENST00000523540 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
PCM1-219ENST00000523540 TMEM259Q4ZIN3 620 aa9.82□□□□□ -0.84
PCM1-219ENST00000523540 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
PCM1-219ENST00000523540 RFC5P40937 340 aa9.81□□□□□ -0.84
PCM1-219ENST00000523540 VSIG8P0DPA2 414 aa9.8□□□□□ -0.84
PCM1-219ENST00000523540 VARSP26640 1264 aaKnown RBP9.8□□□□□ -0.84
PCM1-219ENST00000523540 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
PCM1-219ENST00000523540 BAP1Q92560 729 aa9.8□□□□□ -0.84
PCM1-219ENST00000523540 NNTQ13423 1086 aa9.79□□□□□ -0.84
PCM1-219ENST00000523540 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
PCM1-219ENST00000523540 MRPL14Q6P1L8 145 aaKnown RBP9.79□□□□□ -0.84
PCM1-219ENST00000523540 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
PCM1-219ENST00000523540 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
PCM1-219ENST00000523540 KLF16Q9BXK1 252 aaPredicted RBP9.79□□□□□ -0.84
PCM1-219ENST00000523540 F12P00748 615 aaPredicted RBP9.78□□□□□ -0.84
PCM1-219ENST00000523540 TIMP2P16035 220 aa9.78□□□□□ -0.84
PCM1-219ENST00000523540 ADH1CP00326 375 aa9.75□□□□□ -0.85
PCM1-219ENST00000523540 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
PCM1-219ENST00000523540 WDR4P57081 412 aaKnown RBP9.73□□□□□ -0.85
PCM1-219ENST00000523540 SCARF1Q14162 830 aa9.73□□□□□ -0.85
PCM1-219ENST00000523540 GPKOWQ92917 476 aaPredicted RBP eCLIP9.73□□□□□ -0.85
PCM1-219ENST00000523540 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
PCM1-219ENST00000523540 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
PCM1-219ENST00000523540 APBB1O00213 710 aa9.72□□□□□ -0.85
PCM1-219ENST00000523540 AP1G2O75843 785 aa9.72□□□□□ -0.85
PCM1-219ENST00000523540 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
PCM1-219ENST00000523540 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
PCM1-219ENST00000523540 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
PCM1-219ENST00000523540 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.86
PCM1-219ENST00000523540 FLIIQ13045 1269 aa9.7□□□□□ -0.86
PCM1-219ENST00000523540 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
PCM1-219ENST00000523540 MCM6Q14566 821 aa9.69□□□□□ -0.86
PCM1-219ENST00000523540 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
PCM1-219ENST00000523540 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
PCM1-219ENST00000523540 TSC1Q92574 1164 aa9.69□□□□□ -0.86
PCM1-219ENST00000523540 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
PCM1-219ENST00000523540 GSK3AP49840 483 aa9.68□□□□□ -0.86
PCM1-219ENST00000523540 NBPF14Q5TI25 921 aa9.67□□□□□ -0.86
PCM1-219ENST00000523540 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
PCM1-219ENST00000523540 MTMR14Q8NCE2 650 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms