RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-212ENST00000523387 DISP1Q96F81 1524 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 CABP2Q9NPB3 220 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
CSMD1-212ENST00000523387 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
CSMD1-212ENST00000523387 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
CSMD1-212ENST00000523387 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
CSMD1-212ENST00000523387 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-212ENST00000523387 NPC1L1Q9UHC9 1359 aa11.04□□□□□ -0.64
CSMD1-212ENST00000523387 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
CSMD1-212ENST00000523387 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
CSMD1-212ENST00000523387 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
CSMD1-212ENST00000523387 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
CSMD1-212ENST00000523387 NEK4P51957 841 aa11.03□□□□□ -0.64
CSMD1-212ENST00000523387 ZHX1Q9UKY1 873 aaPredicted RBP11.03□□□□□ -0.64
CSMD1-212ENST00000523387 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
CSMD1-212ENST00000523387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSMD1-212ENST00000523387 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
CSMD1-212ENST00000523387 CDK11BP21127 795 aaKnown RBP11.02□□□□□ -0.64
CSMD1-212ENST00000523387 PRIM1P49642 420 aaKnown RBP11.02□□□□□ -0.64
CSMD1-212ENST00000523387 ZMYM3Q14202 1370 aa11.02□□□□□ -0.64
CSMD1-212ENST00000523387 ADAMTS12P58397 1594 aa11.02□□□□□ -0.64
CSMD1-212ENST00000523387 HMOX1P09601 288 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 HMMRO75330 724 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
CSMD1-212ENST00000523387 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 DYNC1I1O14576 645 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 HMGN5P82970 282 aaKnown RBP11.01□□□□□ -0.65
CSMD1-212ENST00000523387 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 ZBTB40Q9NUA8 1239 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 ATP10BO94823 1461 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 MRC2Q9UBG0 1479 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-212ENST00000523387 PPP1R9BQ96SB3 815 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 RBSNQ9H1K0 784 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
CSMD1-212ENST00000523387 ABCC2Q92887 1545 aa11□□□□□ -0.65
CSMD1-212ENST00000523387 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
CSMD1-212ENST00000523387 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
CSMD1-212ENST00000523387 GNAI1P63096 354 aa11□□□□□ -0.65
CSMD1-212ENST00000523387 GOLGA6L6A8MZA4 724 aa10.99□□□□□ -0.65
CSMD1-212ENST00000523387 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
CSMD1-212ENST00000523387 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
CSMD1-212ENST00000523387 NOL7Q9UMY1 257 aaKnown RBP10.99□□□□□ -0.65
CSMD1-212ENST00000523387 MCM5P33992 734 aa10.99□□□□□ -0.65
CSMD1-212ENST00000523387 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
CSMD1-212ENST00000523387 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-212ENST00000523387 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
CSMD1-212ENST00000523387 CBX1P83916 185 aa10.98□□□□□ -0.65
CSMD1-212ENST00000523387 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
CSMD1-212ENST00000523387 TWISTNBQ3B726 338 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-212ENST00000523387 ZNF771Q7L3S4 317 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-212ENST00000523387 ALDH1L2Q3SY69 923 aa10.98□□□□□ -0.65
CSMD1-212ENST00000523387 LRSAM1Q6UWE0 723 aa10.98□□□□□ -0.65
CSMD1-212ENST00000523387 ZNF445P59923 1031 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 ERC2O15083 957 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 TERF1P54274 439 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 SYCP2Q9BX26 1530 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 TRPM1Q7Z4N2 1603 aa10.97□□□□□ -0.65
CSMD1-212ENST00000523387 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
CSMD1-212ENST00000523387 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.65
CSMD1-212ENST00000523387 ABCC11Q96J66 1382 aa10.96□□□□□ -0.65
CSMD1-212ENST00000523387 KCNJ4P48050 445 aa10.96□□□□□ -0.66
CSMD1-212ENST00000523387 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.66
CSMD1-212ENST00000523387 KIF3AQ9Y496 699 aa10.96□□□□□ -0.66
CSMD1-212ENST00000523387 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
CSMD1-212ENST00000523387 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
CSMD1-212ENST00000523387 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-212ENST00000523387 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
CSMD1-212ENST00000523387 ZNF830Q96NB3 372 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-212ENST00000523387 GDPD2Q9HCC8 539 aa10.95□□□□□ -0.66
CSMD1-212ENST00000523387 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-212ENST00000523387 SOX12O15370 315 aa10.94□□□□□ -0.66
CSMD1-212ENST00000523387 MCM2P49736 904 aa10.94□□□□□ -0.66
CSMD1-212ENST00000523387 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
CSMD1-212ENST00000523387 SPC24Q8NBT2 197 aa10.94□□□□□ -0.66
CSMD1-212ENST00000523387 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.94□□□□□ -0.66
CSMD1-212ENST00000523387 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
CSMD1-212ENST00000523387 FIBPO43427 364 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-212ENST00000523387 ATP6V1DQ9Y5K8 247 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 PKP1Q13835 747 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 TTC22Q5TAA0 569 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-212ENST00000523387 E9PCH4 1651 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 PBRM1Q86U86 1689 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 ZNF500O60304 480 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-212ENST00000523387 PDCL2Q8N4E4 241 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 IL16Q14005 1332 aa10.93□□□□□ -0.66
CSMD1-212ENST00000523387 C16orf71Q8IYS4 520 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-212ENST00000523387 ZNF592Q92610 1267 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 FAM184AQ8NB25 1140 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms