RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ALS2Q96Q42 1657 aa16.96■□□□□ 0.31
CTNNA1-237ENST00000523275 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.3
CTNNA1-237ENST00000523275 ACEP12821 1306 aa16.96■□□□□ 0.3
CTNNA1-237ENST00000523275 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
CTNNA1-237ENST00000523275 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
CTNNA1-237ENST00000523275 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
CTNNA1-237ENST00000523275 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
CTNNA1-237ENST00000523275 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
CTNNA1-237ENST00000523275 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
CTNNA1-237ENST00000523275 KRT27Q7Z3Y8 459 aa16.93■□□□□ 0.3
CTNNA1-237ENST00000523275 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
CTNNA1-237ENST00000523275 ITSN1Q15811 1721 aa16.93■□□□□ 0.3
CTNNA1-237ENST00000523275 A0A0G2JS52 829 aa16.92■□□□□ 0.3
CTNNA1-237ENST00000523275 MYT1Q01538 1121 aa16.92■□□□□ 0.3
CTNNA1-237ENST00000523275 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
CTNNA1-237ENST00000523275 NUTM2GQ5VZR2 741 aa16.92■□□□□ 0.3
CTNNA1-237ENST00000523275 BLMP54132 1417 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-237ENST00000523275 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
CTNNA1-237ENST00000523275 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
CTNNA1-237ENST00000523275 COL14A1Q05707 1796 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-237ENST00000523275 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
CTNNA1-237ENST00000523275 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
CTNNA1-237ENST00000523275 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-237ENST00000523275 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-237ENST00000523275 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
CTNNA1-237ENST00000523275 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
CTNNA1-237ENST00000523275 CHRNA2Q15822 529 aa16.89■□□□□ 0.29
CTNNA1-237ENST00000523275 BRWD3Q6RI45 1802 aa16.88■□□□□ 0.29
CTNNA1-237ENST00000523275 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
CTNNA1-237ENST00000523275 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
CTNNA1-237ENST00000523275 EP400Q96L91 3159 aa16.87■□□□□ 0.29
CTNNA1-237ENST00000523275 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
CTNNA1-237ENST00000523275 EVA1CP58658 441 aa16.85■□□□□ 0.29
CTNNA1-237ENST00000523275 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
CTNNA1-237ENST00000523275 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
CTNNA1-237ENST00000523275 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
CTNNA1-237ENST00000523275 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
CTNNA1-237ENST00000523275 USP19O94966 1318 aa16.83■□□□□ 0.28
CTNNA1-237ENST00000523275 GCP02774 474 aa16.83■□□□□ 0.28
CTNNA1-237ENST00000523275 CPDO75976 1380 aa16.81■□□□□ 0.28
CTNNA1-237ENST00000523275 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
CTNNA1-237ENST00000523275 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
CTNNA1-237ENST00000523275 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
CTNNA1-237ENST00000523275 BAG6P46379 1132 aa16.8■□□□□ 0.28
CTNNA1-237ENST00000523275 NLRP6P59044 892 aa16.8■□□□□ 0.28
CTNNA1-237ENST00000523275 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
CTNNA1-237ENST00000523275 USP6P35125 1406 aa16.79■□□□□ 0.28
CTNNA1-237ENST00000523275 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
CTNNA1-237ENST00000523275 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
CTNNA1-237ENST00000523275 SSH2Q76I76 1423 aa16.79■□□□□ 0.28
CTNNA1-237ENST00000523275 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
CTNNA1-237ENST00000523275 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
CTNNA1-237ENST00000523275 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
CTNNA1-237ENST00000523275 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.28
CTNNA1-237ENST00000523275 THSD7AQ9UPZ6 1657 aa16.77■□□□□ 0.28
CTNNA1-237ENST00000523275 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
CTNNA1-237ENST00000523275 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
CTNNA1-237ENST00000523275 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
CTNNA1-237ENST00000523275 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
CTNNA1-237ENST00000523275 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
CTNNA1-237ENST00000523275 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
CTNNA1-237ENST00000523275 THRAP3Q9Y2W1 955 aaKnown RBP16.74■□□□□ 0.27
CTNNA1-237ENST00000523275 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
CTNNA1-237ENST00000523275 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
CTNNA1-237ENST00000523275 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
CTNNA1-237ENST00000523275 TRIM37O94972 964 aa16.72■□□□□ 0.27
CTNNA1-237ENST00000523275 TONSLQ96HA7 1378 aa16.71■□□□□ 0.27
CTNNA1-237ENST00000523275 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-237ENST00000523275 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 SLIT3O75094 1523 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 CRB1P82279 1406 aa16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 CPSF1Q10570 1443 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-237ENST00000523275 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-237ENST00000523275 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
CTNNA1-237ENST00000523275 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
CTNNA1-237ENST00000523275 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
CTNNA1-237ENST00000523275 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
CTNNA1-237ENST00000523275 APBA3O96018 575 aa16.68■□□□□ 0.26
CTNNA1-237ENST00000523275 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
CTNNA1-237ENST00000523275 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
CTNNA1-237ENST00000523275 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
CTNNA1-237ENST00000523275 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
CTNNA1-237ENST00000523275 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
CTNNA1-237ENST00000523275 SOX12O15370 315 aa16.67■□□□□ 0.26
CTNNA1-237ENST00000523275 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-237ENST00000523275 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-237ENST00000523275 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
CTNNA1-237ENST00000523275 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
CTNNA1-237ENST00000523275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■□□□ 13.1
CTNNA1-237ENST00000523275 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
CTNNA1-237ENST00000523275 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-237ENST00000523275 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms