RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 GJD4Q96KN9 370 aaPredicted RBP23.23■■□□□ 1.31
CLN8-206ENST00000523237 POLR3AO14802 1390 aaPredicted RBP23.23■■□□□ 1.31
CLN8-206ENST00000523237 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
CLN8-206ENST00000523237 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
CLN8-206ENST00000523237 ACEP12821 1306 aa23.21■■□□□ 1.31
CLN8-206ENST00000523237 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
CLN8-206ENST00000523237 PPIP5K1Q6PFW1 1433 aa23.19■■□□□ 1.3
CLN8-206ENST00000523237 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
CLN8-206ENST00000523237 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
CLN8-206ENST00000523237 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
CLN8-206ENST00000523237 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
CLN8-206ENST00000523237 COL14A1Q05707 1796 aaKnown RBP23.18■■□□□ 1.3
CLN8-206ENST00000523237 GLI3P10071 1580 aa23.18■■□□□ 1.3
CLN8-206ENST00000523237 ATAD2Q6PL18 1390 aa23.16■■□□□ 1.3
CLN8-206ENST00000523237 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
CLN8-206ENST00000523237 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
CLN8-206ENST00000523237 VPS72Q15906 364 aa23.15■■□□□ 1.3
CLN8-206ENST00000523237 NRAPQ86VF7 1730 aa23.15■■□□□ 1.3
CLN8-206ENST00000523237 CCDC9Q9Y3X0 531 aaKnown RBP23.12■■□□□ 1.29
CLN8-206ENST00000523237 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
CLN8-206ENST00000523237 BTG4Q9NY30 223 aa23.11■■□□□ 1.29
CLN8-206ENST00000523237 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
CLN8-206ENST00000523237 BRD4O60885 1362 aaPredicted RBP23.11■■□□□ 1.29
CLN8-206ENST00000523237 NUTM2GQ5VZR2 741 aa23.1■■□□□ 1.29
CLN8-206ENST00000523237 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
CLN8-206ENST00000523237 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
CLN8-206ENST00000523237 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
CLN8-206ENST00000523237 KIAA0232Q92628 1395 aa23.07■■□□□ 1.28
CLN8-206ENST00000523237 SBNO2Q9Y2G9 1366 aa23.07■■□□□ 1.28
CLN8-206ENST00000523237 USP6P35125 1406 aa23.07■■□□□ 1.28
CLN8-206ENST00000523237 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
CLN8-206ENST00000523237 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
CLN8-206ENST00000523237 AKAP12Q02952 1782 aa23.04■■□□□ 1.28
CLN8-206ENST00000523237 ONECUT3O60422 494 aaPredicted RBP23.04■■□□□ 1.28
CLN8-206ENST00000523237 ZC3H6P61129 1189 aaKnown RBP23.04■■□□□ 1.28
CLN8-206ENST00000523237 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
CLN8-206ENST00000523237 USP19O94966 1318 aa23.04■■□□□ 1.28
CLN8-206ENST00000523237 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
CLN8-206ENST00000523237 ZNF692Q9BU19 519 aaPredicted RBP23.01■■□□□ 1.27
CLN8-206ENST00000523237 CCDC125Q86Z20 511 aa23■■□□□ 1.27
CLN8-206ENST00000523237 EP400Q96L91 3159 aa23■■□□□ 1.27
CLN8-206ENST00000523237 SPATA31A5Q5VU36 1347 aa23■■□□□ 1.27
CLN8-206ENST00000523237 SPATA31A7Q8IWB4 1347 aa23■■□□□ 1.27
CLN8-206ENST00000523237 CPDO75976 1380 aa23■■□□□ 1.27
CLN8-206ENST00000523237 SSH2Q76I76 1423 aa22.99■■□□□ 1.27
CLN8-206ENST00000523237 A0A0G2JS52 829 aa22.99■■□□□ 1.27
CLN8-206ENST00000523237 GCP02774 474 aa22.99■■□□□ 1.27
CLN8-206ENST00000523237 MYT1Q01538 1121 aa22.99■■□□□ 1.27
CLN8-206ENST00000523237 PIK3C2AO00443 1686 aa22.99■■□□□ 1.27
CLN8-206ENST00000523237 NLRP6P59044 892 aa22.98■■□□□ 1.27
CLN8-206ENST00000523237 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
CLN8-206ENST00000523237 KRT27Q7Z3Y8 459 aa22.97■■□□□ 1.27
CLN8-206ENST00000523237 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
CLN8-206ENST00000523237 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
CLN8-206ENST00000523237 CPSF1Q10570 1443 aaKnown RBP22.96■■□□□ 1.27
CLN8-206ENST00000523237 SLIT3O75094 1523 aa22.96■■□□□ 1.27
CLN8-206ENST00000523237 MON2Q7Z3U7 1717 aa22.96■■□□□ 1.27
CLN8-206ENST00000523237 CAMTA1Q9Y6Y1 1673 aa22.94■■□□□ 1.26
CLN8-206ENST00000523237 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
CLN8-206ENST00000523237 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
CLN8-206ENST00000523237 EVA1CP58658 441 aa22.94■■□□□ 1.26
CLN8-206ENST00000523237 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
CLN8-206ENST00000523237 SPATA31A1Q5TZJ5 1347 aa22.93■■□□□ 1.26
CLN8-206ENST00000523237 TTC21AQ8NDW8 1320 aa22.93■■□□□ 1.26
CLN8-206ENST00000523237 BLMP54132 1417 aaPredicted RBP22.92■■□□□ 1.26
CLN8-206ENST00000523237 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
CLN8-206ENST00000523237 SLC24A1O60721 1099 aa22.9■■□□□ 1.26
CLN8-206ENST00000523237 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
CLN8-206ENST00000523237 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
CLN8-206ENST00000523237 PCGF6Q9BYE7 350 aa22.9■■□□□ 1.26
CLN8-206ENST00000523237 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
CLN8-206ENST00000523237 CD163L1Q9NR16 1453 aa22.88■■□□□ 1.25
CLN8-206ENST00000523237 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
CLN8-206ENST00000523237 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
CLN8-206ENST00000523237 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
CLN8-206ENST00000523237 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
CLN8-206ENST00000523237 AATKQ6ZMQ8 1374 aa22.88■■□□□ 1.25
CLN8-206ENST00000523237 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
CLN8-206ENST00000523237 LARP1Q6PKG0 1096 aaKnown RBP22.87■■□□□ 1.25
CLN8-206ENST00000523237 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
CLN8-206ENST00000523237 TESK2Q96S53 571 aa22.87■■□□□ 1.25
CLN8-206ENST00000523237 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
CLN8-206ENST00000523237 SLC12A5Q9H2X9 1139 aa22.86■■□□□ 1.25
CLN8-206ENST00000523237 COL18A1P39060 1754 aa22.86■■□□□ 1.25
CLN8-206ENST00000523237 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
CLN8-206ENST00000523237 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
CLN8-206ENST00000523237 TERF2IPQ9NYB0 399 aa22.84■■□□□ 1.25
CLN8-206ENST00000523237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.83■■□□□ 1.25
CLN8-206ENST00000523237 TCP11L2Q8N4U5 519 aa22.83■■□□□ 1.25
CLN8-206ENST00000523237 THRAP3Q9Y2W1 955 aaKnown RBP22.83■■□□□ 1.25
CLN8-206ENST00000523237 USP47Q96K76 1375 aa22.83■■□□□ 1.25
CLN8-206ENST00000523237 NINLQ9Y2I6 1382 aa22.83■■□□□ 1.25
CLN8-206ENST00000523237 CRB1P82279 1406 aa22.82■■□□□ 1.24
CLN8-206ENST00000523237 EDC4Q6P2E9 1401 aaKnown RBP22.82■■□□□ 1.24
CLN8-206ENST00000523237 RGPD5Q99666 1765 aa22.82■■□□□ 1.24
CLN8-206ENST00000523237 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
CLN8-206ENST00000523237 NFAT5O94916 1531 aa22.82■■□□□ 1.24
CLN8-206ENST00000523237 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
CLN8-206ENST00000523237 USP31Q70CQ4 1352 aa22.81■■□□□ 1.24
CLN8-206ENST00000523237 SOX12O15370 315 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms