RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
CSGALNACT1-211ENST00000522854 MTHFSP49914 203 aa20.26■□□□□ 0.83
CSGALNACT1-211ENST00000522854 C19orf44Q9H6X5 657 aa20.26■□□□□ 0.83
CSGALNACT1-211ENST00000522854 TTC21BQ7Z4L5 1316 aa20.26■□□□□ 0.83
CSGALNACT1-211ENST00000522854 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
CSGALNACT1-211ENST00000522854 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
CSGALNACT1-211ENST00000522854 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
CSGALNACT1-211ENST00000522854 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
CSGALNACT1-211ENST00000522854 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
CSGALNACT1-211ENST00000522854 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
CSGALNACT1-211ENST00000522854 NUTM2GQ5VZR2 741 aa20.22■□□□□ 0.83
CSGALNACT1-211ENST00000522854 SOX12O15370 315 aa20.21■□□□□ 0.83
CSGALNACT1-211ENST00000522854 FOXO3O43524 673 aa20.21■□□□□ 0.83
CSGALNACT1-211ENST00000522854 ATF3P18847 181 aa20.21■□□□□ 0.83
CSGALNACT1-211ENST00000522854 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
CSGALNACT1-211ENST00000522854 C1orf167Q5SNV9 1468 aa20.2■□□□□ 0.82
CSGALNACT1-211ENST00000522854 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
CSGALNACT1-211ENST00000522854 COG3Q96JB2 828 aa20.2■□□□□ 0.82
CSGALNACT1-211ENST00000522854 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 MST1RQ04912 1400 aa20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 DDX17Q92841 729 aaKnown RBP20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
CSGALNACT1-211ENST00000522854 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
CSGALNACT1-211ENST00000522854 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
CSGALNACT1-211ENST00000522854 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
CSGALNACT1-211ENST00000522854 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
CSGALNACT1-211ENST00000522854 MSH6P52701 1360 aa20.17■□□□□ 0.82
CSGALNACT1-211ENST00000522854 OVOS2A0A0J9YW53 1432 aa20.16■□□□□ 0.82
CSGALNACT1-211ENST00000522854 OVOS2Q6IE36 1432 aa20.16■□□□□ 0.82
CSGALNACT1-211ENST00000522854 PSME1Q06323 249 aa20.16■□□□□ 0.82
CSGALNACT1-211ENST00000522854 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
CSGALNACT1-211ENST00000522854 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
CSGALNACT1-211ENST00000522854 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
CSGALNACT1-211ENST00000522854 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
CSGALNACT1-211ENST00000522854 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
CSGALNACT1-211ENST00000522854 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
CSGALNACT1-211ENST00000522854 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
CSGALNACT1-211ENST00000522854 DCCP43146 1447 aa20.13■□□□□ 0.81
CSGALNACT1-211ENST00000522854 NLRP6P59044 892 aa20.13■□□□□ 0.81
CSGALNACT1-211ENST00000522854 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
CSGALNACT1-211ENST00000522854 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
CSGALNACT1-211ENST00000522854 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
CSGALNACT1-211ENST00000522854 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
CSGALNACT1-211ENST00000522854 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
CSGALNACT1-211ENST00000522854 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
CSGALNACT1-211ENST00000522854 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
CSGALNACT1-211ENST00000522854 KIF1AQ12756 1690 aa20.08■□□□□ 0.81
CSGALNACT1-211ENST00000522854 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
CSGALNACT1-211ENST00000522854 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.8
CSGALNACT1-211ENST00000522854 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.8
CSGALNACT1-211ENST00000522854 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
CSGALNACT1-211ENST00000522854 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
CSGALNACT1-211ENST00000522854 TRPM3Q9HCF6 1732 aaPredicted RBP20.07■□□□□ 0.8
CSGALNACT1-211ENST00000522854 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
CSGALNACT1-211ENST00000522854 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
CSGALNACT1-211ENST00000522854 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
CSGALNACT1-211ENST00000522854 BRINP3Q76B58 766 aa20.05■□□□□ 0.8
CSGALNACT1-211ENST00000522854 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
CSGALNACT1-211ENST00000522854 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
CSGALNACT1-211ENST00000522854 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
CSGALNACT1-211ENST00000522854 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
CSGALNACT1-211ENST00000522854 APAF1O14727 1248 aa20.03■□□□□ 0.8
CSGALNACT1-211ENST00000522854 LTBP4Q8N2S1 1624 aa20.03■□□□□ 0.8
CSGALNACT1-211ENST00000522854 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
CSGALNACT1-211ENST00000522854 HSP90AB2PQ58FF8 381 aa20.03■□□□□ 0.8
CSGALNACT1-211ENST00000522854 USP54Q70EL1 1684 aa20.01■□□□□ 0.79
CSGALNACT1-211ENST00000522854 INSRP06213 1382 aa20■□□□□ 0.79
CSGALNACT1-211ENST00000522854 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
CSGALNACT1-211ENST00000522854 IL13P35225 146 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 HMOX1P09601 288 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 NUDCQ9Y266 331 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 ALS2Q96Q42 1657 aa19.99■□□□□ 0.79
CSGALNACT1-211ENST00000522854 PXDNQ92626 1479 aa19.98■□□□□ 0.79
CSGALNACT1-211ENST00000522854 LTN1O94822 1766 aa19.98■□□□□ 0.79
CSGALNACT1-211ENST00000522854 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
CSGALNACT1-211ENST00000522854 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
CSGALNACT1-211ENST00000522854 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
CSGALNACT1-211ENST00000522854 AMPHP49418 695 aa19.96■□□□□ 0.79
CSGALNACT1-211ENST00000522854 CABLES1Q8TDN4 633 aa19.96■□□□□ 0.79
CSGALNACT1-211ENST00000522854 NFAT5O94916 1531 aa19.96■□□□□ 0.79
CSGALNACT1-211ENST00000522854 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
CSGALNACT1-211ENST00000522854 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
CSGALNACT1-211ENST00000522854 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
CSGALNACT1-211ENST00000522854 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
CSGALNACT1-211ENST00000522854 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
CSGALNACT1-211ENST00000522854 GCP02774 474 aa19.94■□□□□ 0.78
CSGALNACT1-211ENST00000522854 FLT4P35916 1363 aa19.93■□□□□ 0.78
CSGALNACT1-211ENST00000522854 HOXC9P31274 260 aa19.93■□□□□ 0.78
CSGALNACT1-211ENST00000522854 AEBP1Q8IUX7 1158 aa19.93■□□□□ 0.78
CSGALNACT1-211ENST00000522854 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
CSGALNACT1-211ENST00000522854 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
CSGALNACT1-211ENST00000522854 LTV1Q96GA3 475 aaPredicted RBP19.92■□□□□ 0.78
CSGALNACT1-211ENST00000522854 TNS3Q68CZ2 1445 aa19.92■□□□□ 0.78
CSGALNACT1-211ENST00000522854 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
CSGALNACT1-211ENST00000522854 RSPH6AQ9H0K4 717 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms