RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
HMGB1P1-201ENST00000522557 WNT7AO00755 349 aa9.75□□□□□ -0.85
HMGB1P1-201ENST00000522557 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
HMGB1P1-201ENST00000522557 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
HMGB1P1-201ENST00000522557 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P1-201ENST00000522557 LCE2BO14633 110 aa9.74□□□□□ -0.85
HMGB1P1-201ENST00000522557 SH3BP2P78314 561 aa9.74□□□□□ -0.85
HMGB1P1-201ENST00000522557 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
HMGB1P1-201ENST00000522557 MRGPRX2Q96LB1 330 aa9.74□□□□□ -0.85
HMGB1P1-201ENST00000522557 WNT7BP56706 349 aa9.73□□□□□ -0.85
HMGB1P1-201ENST00000522557 TOR4AQ9NXH8 423 aa9.73□□□□□ -0.85
HMGB1P1-201ENST00000522557 AP1G2O75843 785 aa9.72□□□□□ -0.85
HMGB1P1-201ENST00000522557 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
HMGB1P1-201ENST00000522557 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
HMGB1P1-201ENST00000522557 RFC5P40937 340 aa9.71□□□□□ -0.86
HMGB1P1-201ENST00000522557 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
HMGB1P1-201ENST00000522557 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
HMGB1P1-201ENST00000522557 ZNF511Q8NB15 262 aa9.7□□□□□ -0.86
HMGB1P1-201ENST00000522557 TTC24A2A3L6 582 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P1-201ENST00000522557 DGAT1O75907 488 aa9.68□□□□□ -0.86
HMGB1P1-201ENST00000522557 PKDCCQ504Y2 493 aa9.68□□□□□ -0.86
HMGB1P1-201ENST00000522557 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
HMGB1P1-201ENST00000522557 SNIP1Q8TAD8 396 aaKnown RBP9.68□□□□□ -0.86
HMGB1P1-201ENST00000522557 J3QL48 77 aa9.67□□□□□ -0.86
HMGB1P1-201ENST00000522557 SIAH2O43255 324 aa9.67□□□□□ -0.86
HMGB1P1-201ENST00000522557 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
HMGB1P1-201ENST00000522557 NR6A1Q15406 480 aa9.66□□□□□ -0.86
HMGB1P1-201ENST00000522557 SMPD1P17405 629 aa9.65□□□□□ -0.86
HMGB1P1-201ENST00000522557 MYT1Q01538 1121 aa9.65□□□□□ -0.86
HMGB1P1-201ENST00000522557 EPS8L1Q8TE68 723 aa9.65□□□□□ -0.86
HMGB1P1-201ENST00000522557 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
HMGB1P1-201ENST00000522557 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P1-201ENST00000522557 TMEM259Q4ZIN3 620 aa9.63□□□□□ -0.87
HMGB1P1-201ENST00000522557 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
HMGB1P1-201ENST00000522557 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
HMGB1P1-201ENST00000522557 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
HMGB1P1-201ENST00000522557 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
HMGB1P1-201ENST00000522557 AGERQ15109 404 aa9.62□□□□□ -0.87
HMGB1P1-201ENST00000522557 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
HMGB1P1-201ENST00000522557 HPS1Q92902 700 aa9.6□□□□□ -0.87
HMGB1P1-201ENST00000522557 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
HMGB1P1-201ENST00000522557 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
HMGB1P1-201ENST00000522557 AVPP01185 164 aa9.59□□□□□ -0.87
HMGB1P1-201ENST00000522557 BPHLQ86WA6 291 aaPredicted RBP9.59□□□□□ -0.87
HMGB1P1-201ENST00000522557 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
HMGB1P1-201ENST00000522557 SH3BP5LQ7L8J4 393 aa9.58□□□□□ -0.88
HMGB1P1-201ENST00000522557 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
HMGB1P1-201ENST00000522557 AAASQ9NRG9 546 aa9.58□□□□□ -0.88
HMGB1P1-201ENST00000522557 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
HMGB1P1-201ENST00000522557 FAM174AQ8TBP5 190 aa9.57□□□□□ -0.88
HMGB1P1-201ENST00000522557 TRIM34Q9BYJ4 488 aa9.57□□□□□ -0.88
HMGB1P1-201ENST00000522557 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
HMGB1P1-201ENST00000522557 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
HMGB1P1-201ENST00000522557 DACH1Q9UI36 760 aa9.56□□□□□ -0.88
HMGB1P1-201ENST00000522557 PDXDC2PQ6P474 469 aa9.55□□□□□ -0.88
HMGB1P1-201ENST00000522557 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
HMGB1P1-201ENST00000522557 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
HMGB1P1-201ENST00000522557 SNRKQ9NRH2 765 aa9.55□□□□□ -0.88
HMGB1P1-201ENST00000522557 WASF2Q9Y6W5 498 aa9.55□□□□□ -0.88
HMGB1P1-201ENST00000522557 AXIN1O15169 862 aa9.54□□□□□ -0.88
HMGB1P1-201ENST00000522557 MPNDQ8N594 471 aa9.54□□□□□ -0.88
HMGB1P1-201ENST00000522557 BANK1Q8NDB2 785 aa9.54□□□□□ -0.88
HMGB1P1-201ENST00000522557 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P1-201ENST00000522557 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
HMGB1P1-201ENST00000522557 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P1-201ENST00000522557 CRIPAKQ8N1N5 446 aa9.53□□□□□ -0.88
HMGB1P1-201ENST00000522557 OCSTAMPQ9BR26 566 aa9.53□□□□□ -0.88
HMGB1P1-201ENST00000522557 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
HMGB1P1-201ENST00000522557 C1QTNF2Q9BXJ5 285 aa9.53□□□□□ -0.88
HMGB1P1-201ENST00000522557 POTECB2RU33 542 aa9.52□□□□□ -0.89
HMGB1P1-201ENST00000522557 GRM5P41594 1212 aa9.52□□□□□ -0.89
HMGB1P1-201ENST00000522557 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
HMGB1P1-201ENST00000522557 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
HMGB1P1-201ENST00000522557 MTMR14Q8NCE2 650 aa9.51□□□□□ -0.89
HMGB1P1-201ENST00000522557 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
HMGB1P1-201ENST00000522557 ADH1CP00326 375 aa9.5□□□□□ -0.89
HMGB1P1-201ENST00000522557 PTK2Q05397 1052 aa9.5□□□□□ -0.89
HMGB1P1-201ENST00000522557 NNTQ13423 1086 aa9.5□□□□□ -0.89
HMGB1P1-201ENST00000522557 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
HMGB1P1-201ENST00000522557 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
HMGB1P1-201ENST00000522557 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
HMGB1P1-201ENST00000522557 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
HMGB1P1-201ENST00000522557 NR3C2P08235 984 aa9.48□□□□□ -0.89
HMGB1P1-201ENST00000522557 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
HMGB1P1-201ENST00000522557 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P1-201ENST00000522557 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
HMGB1P1-201ENST00000522557 KLF16Q9BXK1 252 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P1-201ENST00000522557 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P1-201ENST00000522557 NR5A1Q13285 461 aa9.45□□□□□ -0.9
HMGB1P1-201ENST00000522557 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
HMGB1P1-201ENST00000522557 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
HMGB1P1-201ENST00000522557 MAP4K5Q9Y4K4 846 aa9.45□□□□□ -0.9
HMGB1P1-201ENST00000522557 GPR37L1O60883 481 aa9.44□□□□□ -0.9
HMGB1P1-201ENST00000522557 FSHRP23945 695 aa9.44□□□□□ -0.9
HMGB1P1-201ENST00000522557 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
HMGB1P1-201ENST00000522557 TIMP2P16035 220 aa9.43□□□□□ -0.9
HMGB1P1-201ENST00000522557 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
HMGB1P1-201ENST00000522557 ARXQ96QS3 562 aa9.43□□□□□ -0.9
HMGB1P1-201ENST00000522557 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
HMGB1P1-201ENST00000522557 SOCS7O14512 581 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms