RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 FBLN1P23142 703 aa16.88■□□□□ 0.29
PABPC1-219ENST00000522387 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
PABPC1-219ENST00000522387 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
PABPC1-219ENST00000522387 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
PABPC1-219ENST00000522387 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
PABPC1-219ENST00000522387 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-219ENST00000522387 ANP32CO43423 234 aa16.86■□□□□ 0.29
PABPC1-219ENST00000522387 USP6P35125 1406 aa16.86■□□□□ 0.29
PABPC1-219ENST00000522387 FYB1O15117 783 aa16.86■□□□□ 0.29
PABPC1-219ENST00000522387 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
PABPC1-219ENST00000522387 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-219ENST00000522387 CGNL1Q0VF96 1302 aa16.85■□□□□ 0.29
PABPC1-219ENST00000522387 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
PABPC1-219ENST00000522387 NPHP3Q7Z494 1330 aa16.83■□□□□ 0.28
PABPC1-219ENST00000522387 NLRP6P59044 892 aa16.82■□□□□ 0.28
PABPC1-219ENST00000522387 PRKRIP1Q9H875 184 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-219ENST00000522387 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
PABPC1-219ENST00000522387 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
PABPC1-219ENST00000522387 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
PABPC1-219ENST00000522387 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
PABPC1-219ENST00000522387 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
PABPC1-219ENST00000522387 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
PABPC1-219ENST00000522387 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-219ENST00000522387 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
PABPC1-219ENST00000522387 COG3Q96JB2 828 aa16.79■□□□□ 0.28
PABPC1-219ENST00000522387 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
PABPC1-219ENST00000522387 SSH2Q76I76 1423 aa16.77■□□□□ 0.28
PABPC1-219ENST00000522387 KIF1AQ12756 1690 aa16.77■□□□□ 0.27
PABPC1-219ENST00000522387 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
PABPC1-219ENST00000522387 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
PABPC1-219ENST00000522387 PXDNQ92626 1479 aa16.75■□□□□ 0.27
PABPC1-219ENST00000522387 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-219ENST00000522387 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
PABPC1-219ENST00000522387 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
PABPC1-219ENST00000522387 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
PABPC1-219ENST00000522387 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
PABPC1-219ENST00000522387 PARD3Q8TEW0 1356 aa16.72■□□□□ 0.27
PABPC1-219ENST00000522387 NLRP13Q86W25 1043 aa16.72■□□□□ 0.27
PABPC1-219ENST00000522387 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
PABPC1-219ENST00000522387 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
PABPC1-219ENST00000522387 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-219ENST00000522387 ZC3H6P61129 1189 aaKnown RBP16.71■□□□□ 0.27
PABPC1-219ENST00000522387 RALBP1Q15311 655 aa16.71■□□□□ 0.27
PABPC1-219ENST00000522387 HSPA1LP34931 641 aa16.7■□□□□ 0.26
PABPC1-219ENST00000522387 MTHFSP49914 203 aa16.7■□□□□ 0.26
PABPC1-219ENST00000522387 LRRC59Q96AG4 307 aaKnown RBP16.7■□□□□ 0.26
PABPC1-219ENST00000522387 TRPM3Q9HCF6 1732 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-219ENST00000522387 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
PABPC1-219ENST00000522387 GCP02774 474 aa16.69■□□□□ 0.26
PABPC1-219ENST00000522387 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
PABPC1-219ENST00000522387 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
PABPC1-219ENST00000522387 NHSL1Q5SYE7 1610 aa16.69■□□□□ 0.26
PABPC1-219ENST00000522387 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-219ENST00000522387 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-219ENST00000522387 PHLPP1O60346 1717 aa16.69■□□□□ 0.26
PABPC1-219ENST00000522387 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-219ENST00000522387 MRS2Q9HD23 443 aa16.69■□□□□ 0.26
PABPC1-219ENST00000522387 NSD2O96028 1365 aa16.68■□□□□ 0.26
PABPC1-219ENST00000522387 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
PABPC1-219ENST00000522387 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
PABPC1-219ENST00000522387 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
PABPC1-219ENST00000522387 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
PABPC1-219ENST00000522387 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
PABPC1-219ENST00000522387 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
PABPC1-219ENST00000522387 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
PABPC1-219ENST00000522387 ALS2Q96Q42 1657 aa16.66■□□□□ 0.26
PABPC1-219ENST00000522387 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
PABPC1-219ENST00000522387 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
PABPC1-219ENST00000522387 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
PABPC1-219ENST00000522387 AMPHP49418 695 aa16.64■□□□□ 0.25
PABPC1-219ENST00000522387 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
PABPC1-219ENST00000522387 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
PABPC1-219ENST00000522387 ARHGEF10O15013 1369 aa16.64■□□□□ 0.25
PABPC1-219ENST00000522387 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.25
PABPC1-219ENST00000522387 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
PABPC1-219ENST00000522387 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
PABPC1-219ENST00000522387 BRD4O60885 1362 aaPredicted RBP16.63■□□□□ 0.25
PABPC1-219ENST00000522387 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
PABPC1-219ENST00000522387 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
PABPC1-219ENST00000522387 MED1Q15648 1581 aaPredicted RBP16.63■□□□□ 0.25
PABPC1-219ENST00000522387 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
PABPC1-219ENST00000522387 KCNH5Q8NCM2 988 aa16.62■□□□□ 0.25
PABPC1-219ENST00000522387 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
PABPC1-219ENST00000522387 MYT1Q01538 1121 aa16.61■□□□□ 0.25
PABPC1-219ENST00000522387 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
PABPC1-219ENST00000522387 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
PABPC1-219ENST00000522387 USP19O94966 1318 aa16.6■□□□□ 0.25
PABPC1-219ENST00000522387 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
PABPC1-219ENST00000522387 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.25
PABPC1-219ENST00000522387 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
PABPC1-219ENST00000522387 HOXC9P31274 260 aa16.57■□□□□ 0.24
PABPC1-219ENST00000522387 AATKQ6ZMQ8 1374 aa16.57■□□□□ 0.24
PABPC1-219ENST00000522387 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
PABPC1-219ENST00000522387 NFAT5O94916 1531 aa16.57■□□□□ 0.24
PABPC1-219ENST00000522387 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
PABPC1-219ENST00000522387 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
PABPC1-219ENST00000522387 LTN1O94822 1766 aa16.56■□□□□ 0.24
PABPC1-219ENST00000522387 PHRF1Q9P1Y6 1649 aaKnown RBP16.55■□□□□ 0.24
PABPC1-219ENST00000522387 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
PABPC1-219ENST00000522387 SLIT3O75094 1523 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms