RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 CCDC97Q96F63 343 aaPredicted RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 CCDC39Q9UFE4 941 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 DDX49Q9Y6V7 483 aaKnown RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 MAP2K2P36507 400 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 CHAF1AQ13111 956 aaPredicted RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 C20orf194Q5TEA3 1177 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 SYT10Q6XYQ8 523 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 DDX46Q7L014 1031 aaKnown RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 EXOC8Q8IYI6 725 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 PRKRIP1Q9H875 184 aaPredicted RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 ANKRD33BA6NCL7 494 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.63□□□□□ -1.512e-6■■■■■ 49.1
PCM1-215ENST00000522275 IRAK4Q9NWZ3 460 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 SMC3Q9UQE7 1217 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 PAXBP1Q9Y5B6 917 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 A0A1B0GUL7 405 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 CTIFO43310 598 aaKnown RBP5.63□□□□□ -1.51
PCM1-215ENST00000522275 REC8O95072 547 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 SETDB1Q15047 1291 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 ZSCAN26Q16670 478 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 TTC19Q6DKK2 380 aaPredicted RBP5.63□□□□□ -1.51
PCM1-215ENST00000522275 PROCA1Q8NCQ7 364 aaPredicted RBP5.63□□□□□ -1.51
PCM1-215ENST00000522275 ANKRD20A12PQ8NF67 263 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 TBC1D22AQ8WUA7 517 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 LCMT1Q9UIC8 334 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 ANAPC4Q9UJX5 808 aa5.63□□□□□ -1.51
PCM1-215ENST00000522275 MAPKBP1O60336 1514 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 NRDCO43847 1150 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 SEC24BO95487 1268 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 MYBPC2Q14324 1141 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 MUM1L1Q5H9M0 696 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 CADPS2Q86UW7 1296 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 KIF18AQ8NI77 898 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 KDM2AQ9Y2K7 1162 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 KDM2BQ8NHM5 1336 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 TNIKQ9UKE5 1360 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 UNC13AQ9UPW8 1703 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 PACS2Q86VP3 889 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 PRPF38AQ8NAV1 312 aaKnown RBP5.62□□□□□ -1.51
PCM1-215ENST00000522275 ATG3Q9NT62 314 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
PCM1-215ENST00000522275 VIRMAQ69YN4 1812 aaKnown RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 IBTKQ9P2D0 1353 aaPredicted RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 SENP3-EIF4A1A0A087X0R7 540 aa5.61□□□□□ -1.51
PCM1-215ENST00000522275 RIOK3O14730 519 aaKnown RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 FAM163BP0C2L3 166 aa5.61□□□□□ -1.51
PCM1-215ENST00000522275 TTC31Q49AM3 519 aaPredicted RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 MSL3Q8N5Y2 521 aaKnown RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
PCM1-215ENST00000522275 ERCC4Q92889 916 aaPredicted RBP5.61□□□□□ -1.51
PCM1-215ENST00000522275 IGF1RP08069 1367 aa5.61□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6L22H0YM25 854 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 HSPA5P11021 654 aaKnown RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 NCBP1Q09161 790 aaKnown RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 JAKMIP3Q5VZ66 844 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 SPTY2D1Q68D10 685 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 CENPQQ7L2Z9 268 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 PIBF1Q8WXW3 757 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 MKL1Q969V6 931 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 SUDS3Q9H7L9 328 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 DIAPH3Q9NSV4 1193 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
PCM1-215ENST00000522275 ABCD1P33897 745 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 FKBP5Q13451 457 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 MFSD4BQ5TF39 518 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 NAIF1Q69YI7 327 aaPredicted RBP5.6□□□□□ -1.51
PCM1-215ENST00000522275 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 KRBA2Q6ZNG9 492 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 TATDN2Q93075 761 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 MAF1Q9H063 256 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 RBSNQ9H1K0 784 aa5.6□□□□□ -1.51
PCM1-215ENST00000522275 ECEL1O95672 775 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 SKILP12757 684 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 ZRSR2Q15696 482 aaKnown RBP5.59□□□□□ -1.51
PCM1-215ENST00000522275 SRLQ86TD4 932 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 SUGP1Q8IWZ8 645 aaKnown RBP5.59□□□□□ -1.51
PCM1-215ENST00000522275 MICALL1Q8N3F8 863 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 CEP89Q96ST8 783 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 ST7Q9NRC1 585 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 ETAA1Q9NY74 926 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 TPD52L2O43399 206 aaKnown RBP5.59□□□□□ -1.51
PCM1-215ENST00000522275 SSFA2P28290 1259 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 SYCP1Q15431 976 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 TRIM74Q86UV6 250 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 TRIM73Q86UV7 250 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 SDR16C5Q8N3Y7 309 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 GBP4Q96PP9 640 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 CRBNQ96SW2 442 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 ZNF232Q9UNY5 417 aa5.59□□□□□ -1.51
PCM1-215ENST00000522275 PLIN1O60240 522 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms