RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
CPNE3-205ENST00000522240 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
CPNE3-205ENST00000522240 KIF20BQ96Q89 1820 aa17.86■□□□□ 0.45
CPNE3-205ENST00000522240 NSD2O96028 1365 aa17.86■□□□□ 0.45
CPNE3-205ENST00000522240 C1orf167Q5SNV9 1468 aa17.86■□□□□ 0.45
CPNE3-205ENST00000522240 CADPS2Q86UW7 1296 aa17.85■□□□□ 0.45
CPNE3-205ENST00000522240 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
CPNE3-205ENST00000522240 USP6P35125 1406 aa17.84■□□□□ 0.45
CPNE3-205ENST00000522240 PARD3Q8TEW0 1356 aa17.84■□□□□ 0.45
CPNE3-205ENST00000522240 ATF3P18847 181 aa17.84■□□□□ 0.45
CPNE3-205ENST00000522240 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
CPNE3-205ENST00000522240 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
CPNE3-205ENST00000522240 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
CPNE3-205ENST00000522240 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
CPNE3-205ENST00000522240 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
CPNE3-205ENST00000522240 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
CPNE3-205ENST00000522240 MIER1Q8N108 512 aa17.82■□□□□ 0.44
CPNE3-205ENST00000522240 ACEP12821 1306 aa17.81■□□□□ 0.44
CPNE3-205ENST00000522240 RALBP1Q15311 655 aa17.81■□□□□ 0.44
CPNE3-205ENST00000522240 SSH2Q76I76 1423 aa17.81■□□□□ 0.44
CPNE3-205ENST00000522240 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
CPNE3-205ENST00000522240 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
CPNE3-205ENST00000522240 USP54Q70EL1 1684 aa17.79■□□□□ 0.44
CPNE3-205ENST00000522240 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
CPNE3-205ENST00000522240 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
CPNE3-205ENST00000522240 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
CPNE3-205ENST00000522240 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
CPNE3-205ENST00000522240 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
CPNE3-205ENST00000522240 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
CPNE3-205ENST00000522240 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
CPNE3-205ENST00000522240 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
CPNE3-205ENST00000522240 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
CPNE3-205ENST00000522240 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
CPNE3-205ENST00000522240 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
CPNE3-205ENST00000522240 OVOS2A0A0J9YW53 1432 aa17.73■□□□□ 0.43
CPNE3-205ENST00000522240 OVOS2Q6IE36 1432 aa17.73■□□□□ 0.43
CPNE3-205ENST00000522240 FKBP8Q14318 412 aa17.73■□□□□ 0.43
CPNE3-205ENST00000522240 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
CPNE3-205ENST00000522240 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
CPNE3-205ENST00000522240 NHSL1Q5SYE7 1610 aa17.72■□□□□ 0.43
CPNE3-205ENST00000522240 FYB1O15117 783 aa17.72■□□□□ 0.43
CPNE3-205ENST00000522240 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
CPNE3-205ENST00000522240 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
CPNE3-205ENST00000522240 ALS2Q96Q42 1657 aa17.7■□□□□ 0.42
CPNE3-205ENST00000522240 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
CPNE3-205ENST00000522240 MARF1Q9Y4F3 1742 aaKnown RBP17.69■□□□□ 0.42
CPNE3-205ENST00000522240 PXDNQ92626 1479 aa17.69■□□□□ 0.42
CPNE3-205ENST00000522240 MORC1Q86VD1 984 aa17.69■□□□□ 0.42
CPNE3-205ENST00000522240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
CPNE3-205ENST00000522240 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
CPNE3-205ENST00000522240 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
CPNE3-205ENST00000522240 BRINP3Q76B58 766 aa17.68■□□□□ 0.42
CPNE3-205ENST00000522240 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
CPNE3-205ENST00000522240 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
CPNE3-205ENST00000522240 NME9Q86XW9 330 aa17.67■□□□□ 0.42
CPNE3-205ENST00000522240 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
CPNE3-205ENST00000522240 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
CPNE3-205ENST00000522240 FOXO3O43524 673 aa17.66■□□□□ 0.42
CPNE3-205ENST00000522240 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
CPNE3-205ENST00000522240 PSME1Q06323 249 aa17.66■□□□□ 0.42
CPNE3-205ENST00000522240 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
CPNE3-205ENST00000522240 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
CPNE3-205ENST00000522240 COG3Q96JB2 828 aa17.65■□□□□ 0.42
CPNE3-205ENST00000522240 TNS3Q68CZ2 1445 aa17.64■□□□□ 0.42
CPNE3-205ENST00000522240 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
CPNE3-205ENST00000522240 SLIT3O75094 1523 aa17.63■□□□□ 0.41
CPNE3-205ENST00000522240 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
CPNE3-205ENST00000522240 MRS2Q9HD23 443 aa17.62■□□□□ 0.41
CPNE3-205ENST00000522240 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
CPNE3-205ENST00000522240 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
CPNE3-205ENST00000522240 ARHGEF10O15013 1369 aa17.6■□□□□ 0.41
CPNE3-205ENST00000522240 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
CPNE3-205ENST00000522240 CRYBG1Q9Y4K1 1723 aa17.6■□□□□ 0.41
CPNE3-205ENST00000522240 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
CPNE3-205ENST00000522240 NFAT5O94916 1531 aa17.59■□□□□ 0.41
CPNE3-205ENST00000522240 USP19O94966 1318 aa17.59■□□□□ 0.41
CPNE3-205ENST00000522240 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
CPNE3-205ENST00000522240 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
CPNE3-205ENST00000522240 NLRP6P59044 892 aa17.58■□□□□ 0.4
CPNE3-205ENST00000522240 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.4
CPNE3-205ENST00000522240 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
CPNE3-205ENST00000522240 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.4
CPNE3-205ENST00000522240 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
CPNE3-205ENST00000522240 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
CPNE3-205ENST00000522240 SHPRHQ149N8 1683 aa17.57■□□□□ 0.4
CPNE3-205ENST00000522240 INSRP06213 1382 aa17.56■□□□□ 0.4
CPNE3-205ENST00000522240 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
CPNE3-205ENST00000522240 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
CPNE3-205ENST00000522240 ABCA3Q99758 1704 aa17.55■□□□□ 0.4
CPNE3-205ENST00000522240 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
CPNE3-205ENST00000522240 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
CPNE3-205ENST00000522240 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
CPNE3-205ENST00000522240 MTHFSP49914 203 aa17.54■□□□□ 0.4
CPNE3-205ENST00000522240 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
CPNE3-205ENST00000522240 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
CPNE3-205ENST00000522240 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
CPNE3-205ENST00000522240 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
CPNE3-205ENST00000522240 LTN1O94822 1766 aa17.53■□□□□ 0.4
CPNE3-205ENST00000522240 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
CPNE3-205ENST00000522240 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms