RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
SGCE-211ENST00000522045 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
SGCE-211ENST00000522045 NUTM2DQ5VT03 806 aaPredicted RBP12.38□□□□□ -0.43
SGCE-211ENST00000522045 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
SGCE-211ENST00000522045 VARSP26640 1264 aaKnown RBP12.36□□□□□ -0.43
SGCE-211ENST00000522045 TSC1Q92574 1164 aa12.36□□□□□ -0.43
SGCE-211ENST00000522045 BCANQ96GW7 911 aa12.36□□□□□ -0.43
SGCE-211ENST00000522045 RSPH6AQ9H0K4 717 aa12.36□□□□□ -0.43
SGCE-211ENST00000522045 F12P00748 615 aaPredicted RBP12.35□□□□□ -0.43
SGCE-211ENST00000522045 QPCTQ16769 361 aa12.35□□□□□ -0.43
SGCE-211ENST00000522045 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
SGCE-211ENST00000522045 MAP10Q9P2G4 905 aa12.35□□□□□ -0.43
SGCE-211ENST00000522045 LILRB3O75022 631 aa12.34□□□□□ -0.43
SGCE-211ENST00000522045 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
SGCE-211ENST00000522045 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
SGCE-211ENST00000522045 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
SGCE-211ENST00000522045 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
SGCE-211ENST00000522045 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
SGCE-211ENST00000522045 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
SGCE-211ENST00000522045 MPNDQ8N594 471 aa12.3□□□□□ -0.44
SGCE-211ENST00000522045 KIFC2Q96AC6 838 aa12.3□□□□□ -0.44
SGCE-211ENST00000522045 CAPN5O15484 640 aaPredicted RBP12.29□□□□□ -0.44
SGCE-211ENST00000522045 FAM174AQ8TBP5 190 aa12.29□□□□□ -0.44
SGCE-211ENST00000522045 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
SGCE-211ENST00000522045 POLR3EQ9NVU0 708 aa12.28□□□□□ -0.44
SGCE-211ENST00000522045 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.45
SGCE-211ENST00000522045 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.45
SGCE-211ENST00000522045 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
SGCE-211ENST00000522045 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
SGCE-211ENST00000522045 NNTQ13423 1086 aa12.26□□□□□ -0.45
SGCE-211ENST00000522045 AGERQ15109 404 aa12.26□□□□□ -0.45
SGCE-211ENST00000522045 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
SGCE-211ENST00000522045 BPHLQ86WA6 291 aaPredicted RBP12.25□□□□□ -0.45
SGCE-211ENST00000522045 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
SGCE-211ENST00000522045 ADH1CP00326 375 aa12.23□□□□□ -0.45
SGCE-211ENST00000522045 BMP1P13497 986 aa12.23□□□□□ -0.45
SGCE-211ENST00000522045 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
SGCE-211ENST00000522045 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
SGCE-211ENST00000522045 WFS1O76024 890 aa12.22□□□□□ -0.45
SGCE-211ENST00000522045 LCE2AQ5TA79 106 aaPredicted RBP12.22□□□□□ -0.45
SGCE-211ENST00000522045 NBPF14Q5TI25 921 aa12.22□□□□□ -0.45
SGCE-211ENST00000522045 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
SGCE-211ENST00000522045 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
SGCE-211ENST00000522045 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
SGCE-211ENST00000522045 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
SGCE-211ENST00000522045 C4orf48Q5BLP8 95 aa12.2□□□□□ -0.46
SGCE-211ENST00000522045 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
SGCE-211ENST00000522045 NFX1Q12986 1120 aaKnown RBP12.19□□□□□ -0.46
SGCE-211ENST00000522045 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
SGCE-211ENST00000522045 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
SGCE-211ENST00000522045 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
SGCE-211ENST00000522045 TIMP2P16035 220 aa12.17□□□□□ -0.46
SGCE-211ENST00000522045 CTDSPL2Q05D32 466 aa12.17□□□□□ -0.46
SGCE-211ENST00000522045 NR5A1Q13285 461 aa12.16□□□□□ -0.46
SGCE-211ENST00000522045 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
SGCE-211ENST00000522045 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
SGCE-211ENST00000522045 TERTO14746 1132 aaKnown RBP12.14□□□□□ -0.47
SGCE-211ENST00000522045 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
SGCE-211ENST00000522045 ZFP42Q96MM3 310 aa12.14□□□□□ -0.47
SGCE-211ENST00000522045 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
SGCE-211ENST00000522045 C1QTNF2Q9BXJ5 285 aa12.14□□□□□ -0.47
SGCE-211ENST00000522045 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
SGCE-211ENST00000522045 SCARF1Q14162 830 aa12.13□□□□□ -0.47
SGCE-211ENST00000522045 MRPL14Q6P1L8 145 aaKnown RBP12.13□□□□□ -0.47
SGCE-211ENST00000522045 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
SGCE-211ENST00000522045 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
SGCE-211ENST00000522045 ZIC2O95409 532 aaPredicted RBP12.11□□□□□ -0.47
SGCE-211ENST00000522045 NR3C2P08235 984 aa12.11□□□□□ -0.47
SGCE-211ENST00000522045 GRM5P41594 1212 aa12.11□□□□□ -0.47
SGCE-211ENST00000522045 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
SGCE-211ENST00000522045 TRMT44Q8IYL2 757 aaKnown RBP12.11□□□□□ -0.47
SGCE-211ENST00000522045 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
SGCE-211ENST00000522045 MAP4K5Q9Y4K4 846 aa12.11□□□□□ -0.47
SGCE-211ENST00000522045 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
SGCE-211ENST00000522045 FSHRP23945 695 aa12.09□□□□□ -0.47
SGCE-211ENST00000522045 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
SGCE-211ENST00000522045 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
SGCE-211ENST00000522045 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
SGCE-211ENST00000522045 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
SGCE-211ENST00000522045 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
SGCE-211ENST00000522045 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
SGCE-211ENST00000522045 FKBPLQ9UIM3 349 aa12.08□□□□□ -0.48
SGCE-211ENST00000522045 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
SGCE-211ENST00000522045 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
SGCE-211ENST00000522045 WIPF1O43516 503 aa12.06□□□□□ -0.48
SGCE-211ENST00000522045 AP1G2O75843 785 aa12.06□□□□□ -0.48
SGCE-211ENST00000522045 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
SGCE-211ENST00000522045 NR6A1Q15406 480 aa12.05□□□□□ -0.48
SGCE-211ENST00000522045 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
SGCE-211ENST00000522045 NPAS3Q8IXF0 933 aa12.05□□□□□ -0.48
SGCE-211ENST00000522045 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
SGCE-211ENST00000522045 UPP2O95045 317 aa12.03□□□□□ -0.48
SGCE-211ENST00000522045 CCDC116Q8IYX3 515 aa12.03□□□□□ -0.48
SGCE-211ENST00000522045 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
SGCE-211ENST00000522045 LCE2CQ5TA81 110 aa12.02□□□□□ -0.49
SGCE-211ENST00000522045 MEIOBQ8N635 442 aa12.02□□□□□ -0.49
SGCE-211ENST00000522045 SLC10A4Q96EP9 437 aa12.02□□□□□ -0.49
SGCE-211ENST00000522045 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.49
SGCE-211ENST00000522045 C6orf118Q5T5N4 469 aa12.01□□□□□ -0.49
SGCE-211ENST00000522045 ZBTB33Q86T24 672 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms