RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 POLR3AO14802 1390 aaPredicted RBP26.08■■□□□ 1.77
TOP1MT-215ENST00000522043 ATAD2Q6PL18 1390 aa26.08■■□□□ 1.77
TOP1MT-215ENST00000522043 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
TOP1MT-215ENST00000522043 CENPJQ9HC77 1338 aaPredicted RBP26.07■■□□□ 1.76
TOP1MT-215ENST00000522043 COL14A1Q05707 1796 aaKnown RBP26.07■■□□□ 1.76
TOP1MT-215ENST00000522043 PHRF1Q9P1Y6 1649 aaKnown RBP26.06■■□□□ 1.76
TOP1MT-215ENST00000522043 EP400Q96L91 3159 aa26.05■■□□□ 1.76
TOP1MT-215ENST00000522043 PAK3O75914 559 aaPredicted RBP26.05■■□□□ 1.76
TOP1MT-215ENST00000522043 VPS72Q15906 364 aa26.05■■□□□ 1.76
TOP1MT-215ENST00000522043 CCDC61Q9Y6R9 512 aa26.05■■□□□ 1.76
TOP1MT-215ENST00000522043 ACEP12821 1306 aa26.05■■□□□ 1.76
TOP1MT-215ENST00000522043 PLEKHG3A1L390 1219 aa26.04■■□□□ 1.76
TOP1MT-215ENST00000522043 NBPF8Q3BBV2 869 aa26.02■■□□□ 1.76
TOP1MT-215ENST00000522043 CABP2Q9NPB3 220 aa26.01■■□□□ 1.75
TOP1MT-215ENST00000522043 PPIP5K1Q6PFW1 1433 aa25.99■■□□□ 1.75
TOP1MT-215ENST00000522043 BTG4Q9NY30 223 aa25.99■■□□□ 1.75
TOP1MT-215ENST00000522043 ONECUT3O60422 494 aaPredicted RBP25.98■■□□□ 1.75
TOP1MT-215ENST00000522043 SRPK2P78362 688 aaKnown RBP25.97■■□□□ 1.75
TOP1MT-215ENST00000522043 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
TOP1MT-215ENST00000522043 NRKQ7Z2Y5 1582 aa25.96■■□□□ 1.75
TOP1MT-215ENST00000522043 SEPT12Q8IYM1 358 aa25.96■■□□□ 1.75
TOP1MT-215ENST00000522043 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.75
TOP1MT-215ENST00000522043 KIAA0232Q92628 1395 aa25.95■■□□□ 1.74
TOP1MT-215ENST00000522043 CCDC9Q9Y3X0 531 aaKnown RBP25.94■■□□□ 1.74
TOP1MT-215ENST00000522043 PRDM11Q9NQV5 511 aa25.91■■□□□ 1.74
TOP1MT-215ENST00000522043 CHRNA2Q15822 529 aa25.9■■□□□ 1.74
TOP1MT-215ENST00000522043 CABP1Q9NZU7 370 aa25.9■■□□□ 1.74
TOP1MT-215ENST00000522043 USP19O94966 1318 aa25.89■■□□□ 1.74
TOP1MT-215ENST00000522043 THSD7AQ9UPZ6 1657 aa25.89■■□□□ 1.73
TOP1MT-215ENST00000522043 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 USP6P35125 1406 aa25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 ZC3H6P61129 1189 aaKnown RBP25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 ABTB2Q8N961 1025 aa25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 SSH2Q76I76 1423 aa25.88■■□□□ 1.73
TOP1MT-215ENST00000522043 LMO7Q8WWI1 1683 aa25.87■■□□□ 1.73
TOP1MT-215ENST00000522043 FAM98CQ17RN3 349 aaKnown RBP25.87■■□□□ 1.73
TOP1MT-215ENST00000522043 EVC2Q86UK5 1308 aa25.87■■□□□ 1.73
TOP1MT-215ENST00000522043 AKAP12Q02952 1782 aa25.86■■□□□ 1.73
TOP1MT-215ENST00000522043 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
TOP1MT-215ENST00000522043 CCDC125Q86Z20 511 aa25.85■■□□□ 1.73
TOP1MT-215ENST00000522043 BLMP54132 1417 aaPredicted RBP25.85■■□□□ 1.73
TOP1MT-215ENST00000522043 CAMTA1Q9Y6Y1 1673 aa25.84■■□□□ 1.73
TOP1MT-215ENST00000522043 KRT27Q7Z3Y8 459 aa25.84■■□□□ 1.73
TOP1MT-215ENST00000522043 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
TOP1MT-215ENST00000522043 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
TOP1MT-215ENST00000522043 CPDO75976 1380 aa25.82■■□□□ 1.72
TOP1MT-215ENST00000522043 SLIT3O75094 1523 aa25.81■■□□□ 1.72
TOP1MT-215ENST00000522043 SPATA31A1Q5TZJ5 1347 aa25.81■■□□□ 1.72
TOP1MT-215ENST00000522043 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
TOP1MT-215ENST00000522043 SBNO2Q9Y2G9 1366 aa25.8■■□□□ 1.72
TOP1MT-215ENST00000522043 GCP02774 474 aa25.79■■□□□ 1.72
TOP1MT-215ENST00000522043 NLRP13Q86W25 1043 aa25.79■■□□□ 1.72
TOP1MT-215ENST00000522043 STRN4Q9NRL3 753 aa25.79■■□□□ 1.72
TOP1MT-215ENST00000522043 A0A0G2JS52 829 aa25.78■■□□□ 1.72
TOP1MT-215ENST00000522043 MYT1Q01538 1121 aa25.78■■□□□ 1.72
TOP1MT-215ENST00000522043 DEFB132Q7Z7B7 95 aa25.77■■□□□ 1.72
TOP1MT-215ENST00000522043 CARD11Q9BXL7 1154 aa25.77■■□□□ 1.72
TOP1MT-215ENST00000522043 CPSF1Q10570 1443 aaKnown RBP25.76■■□□□ 1.71
TOP1MT-215ENST00000522043 MON2Q7Z3U7 1717 aa25.76■■□□□ 1.71
TOP1MT-215ENST00000522043 COL18A1P39060 1754 aa25.75■■□□□ 1.71
TOP1MT-215ENST00000522043 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
TOP1MT-215ENST00000522043 NLRP6P59044 892 aa25.74■■□□□ 1.71
TOP1MT-215ENST00000522043 LARP1Q6PKG0 1096 aaKnown RBP25.74■■□□□ 1.71
TOP1MT-215ENST00000522043 COL5A2P05997 1499 aaPredicted RBP25.73■■□□□ 1.71
TOP1MT-215ENST00000522043 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
TOP1MT-215ENST00000522043 CD163L1Q9NR16 1453 aa25.72■■□□□ 1.71
TOP1MT-215ENST00000522043 USP35Q9P2H5 1018 aa25.71■■□□□ 1.71
TOP1MT-215ENST00000522043 TNS1Q9HBL0 1735 aaKnown RBP25.71■■□□□ 1.71
TOP1MT-215ENST00000522043 ZNF692Q9BU19 519 aaPredicted RBP25.7■■□□□ 1.7
TOP1MT-215ENST00000522043 RGPD1P0DJD0 1748 aa25.7■■□□□ 1.7
TOP1MT-215ENST00000522043 EVA1CP58658 441 aa25.69■■□□□ 1.7
TOP1MT-215ENST00000522043 BARGINQ6ZT62 677 aa25.68■■□□□ 1.7
TOP1MT-215ENST00000522043 RGPD5Q99666 1765 aa25.68■■□□□ 1.7
TOP1MT-215ENST00000522043 ZRANB1Q9UGI0 708 aa25.67■■□□□ 1.7
TOP1MT-215ENST00000522043 AATKQ6ZMQ8 1374 aa25.67■■□□□ 1.7
TOP1MT-215ENST00000522043 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
TOP1MT-215ENST00000522043 SF3B2Q13435 895 aaKnown RBP25.66■■□□□ 1.7
TOP1MT-215ENST00000522043 USP54Q70EL1 1684 aa25.66■■□□□ 1.7
TOP1MT-215ENST00000522043 NFAT5O94916 1531 aa25.66■■□□□ 1.7
TOP1MT-215ENST00000522043 TTC21AQ8NDW8 1320 aa25.65■■□□□ 1.7
TOP1MT-215ENST00000522043 PARP4Q9UKK3 1724 aaKnown RBP25.65■■□□□ 1.7
TOP1MT-215ENST00000522043 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.7
TOP1MT-215ENST00000522043 TCP11L2Q8N4U5 519 aa25.64■■□□□ 1.7
TOP1MT-215ENST00000522043 AXIN2Q9Y2T1 843 aa25.64■■□□□ 1.7
TOP1MT-215ENST00000522043 TESK2Q96S53 571 aa25.63■■□□□ 1.69
TOP1MT-215ENST00000522043 CRB1P82279 1406 aa25.63■■□□□ 1.69
TOP1MT-215ENST00000522043 WNK3Q9BYP7 1800 aa25.61■■□□□ 1.69
TOP1MT-215ENST00000522043 ARHGEF25Q86VW2 580 aa25.61■■□□□ 1.69
TOP1MT-215ENST00000522043 SLC12A5Q9H2X9 1139 aa25.61■■□□□ 1.69
TOP1MT-215ENST00000522043 USP31Q70CQ4 1352 aa25.59■■□□□ 1.69
TOP1MT-215ENST00000522043 SRCAPQ6ZRS2 3230 aa25.59■■□□□ 1.69
TOP1MT-215ENST00000522043 THRAP3Q9Y2W1 955 aaKnown RBP25.59■■□□□ 1.69
TOP1MT-215ENST00000522043 DISP2A7MBM2 1401 aa25.59■■□□□ 1.69
TOP1MT-215ENST00000522043 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
TOP1MT-215ENST00000522043 ST20-MTHFSA0A0A6YYL1 179 aa25.58■■□□□ 1.69
TOP1MT-215ENST00000522043 SOX12O15370 315 aa25.58■■□□□ 1.69
TOP1MT-215ENST00000522043 BAG6P46379 1132 aa25.58■■□□□ 1.69
TOP1MT-215ENST00000522043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.58■■□□□ 1.69
TOP1MT-215ENST00000522043 EN1Q05925 392 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms