RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	AKAP12	Q02952	1782 aa		11.79	□□□□□ -0.52
CTNNA1-231	ENST00000521941	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.79	□□□□□ -0.52
CTNNA1-231	ENST00000521941	ZNF772	Q68DY9	489 aa	Predicted RBP	11.79	□□□□□ -0.52
CTNNA1-231	ENST00000521941	TIMELESS	Q9UNS1	1208 aa		11.79	□□□□□ -0.52
CTNNA1-231	ENST00000521941	ATAD2	Q6PL18	1390 aa		11.79	□□□□□ -0.52
CTNNA1-231	ENST00000521941	PLCH1	Q4KWH8	1693 aa		11.78	□□□□□ -0.52
CTNNA1-231	ENST00000521941	PLEKHG3	A1L390	1219 aa		11.78	□□□□□ -0.52
CTNNA1-231	ENST00000521941	TMC1	Q8TDI8	760 aa		11.77	□□□□□ -0.53
CTNNA1-231	ENST00000521941	USP21	Q9UK80	565 aa		11.77	□□□□□ -0.53
CTNNA1-231	ENST00000521941	USP6	P35125	1406 aa		11.77	□□□□□ -0.53
CTNNA1-231	ENST00000521941	MON2	Q7Z3U7	1717 aa		11.76	□□□□□ -0.53
CTNNA1-231	ENST00000521941	NRK	Q7Z2Y5	1582 aa		11.75	□□□□□ -0.53
CTNNA1-231	ENST00000521941	PIK3C2A	O00443	1686 aa		11.75	□□□□□ -0.53
CTNNA1-231	ENST00000521941	ABTB2	Q8N961	1025 aa		11.75	□□□□□ -0.53
CTNNA1-231	ENST00000521941	TESK2	Q96S53	571 aa		11.75	□□□□□ -0.53
CTNNA1-231	ENST00000521941	QTRT2	Q9H974	415 aa	Known RBP	11.74	□□□□□ -0.53
CTNNA1-231	ENST00000521941	KTN1	Q86UP2	1357 aa	Known RBP	11.74	□□□□□ -0.53
CTNNA1-231	ENST00000521941	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.74	□□□□□ -0.53
CTNNA1-231	ENST00000521941	ZBTB7C	A1YPR0	619 aa		11.73	□□□□□ -0.53
CTNNA1-231	ENST00000521941	RXRB	P28702	533 aa		11.73	□□□□□ -0.53
CTNNA1-231	ENST00000521941	TMF1	P82094	1093 aa		11.73	□□□□□ -0.53
CTNNA1-231	ENST00000521941	COL14A1	Q05707	1796 aa	Known RBP	11.73	□□□□□ -0.53
CTNNA1-231	ENST00000521941	NRAP	Q86VF7	1730 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	NWD2	Q9ULI1	1742 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	SLIT2	O94813	1529 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	SOCS7	O14512	581 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	POLR3GL	Q9BT43	218 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	SLC12A5	Q9H2X9	1139 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	PRDM11	Q9NQV5	511 aa		11.72	□□□□□ -0.53
CTNNA1-231	ENST00000521941	BCL9L	Q86UU0	1499 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	CD163L1	Q9NR16	1453 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	ATRN	O75882	1429 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	CPSF1	Q10570	1443 aa	Known RBP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	KIAA0232	Q92628	1395 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	TTC21B	Q7Z4L5	1316 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	NLRP6	P59044	892 aa		11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	ZC3H6	P61129	1189 aa	Known RBP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	TRPC5	Q9UL62	973 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	CCDC9	Q9Y3X0	531 aa	Known RBP	11.71	□□□□□ -0.53
CTNNA1-231	ENST00000521941	RGS12	O14924	1447 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941		A0A1W2PP64	1363 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	BRD4	O60885	1362 aa	Predicted RBP	11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	SOX12	O15370	315 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	RBM6	P78332	1123 aa	Known RBP	11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	CHRNA2	Q15822	529 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	NLRP13	Q86W25	1043 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	ZNF692	Q9BU19	519 aa	Predicted RBP	11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	MYOM1	P52179	1685 aa		11.7	□□□□□ -0.54
CTNNA1-231	ENST00000521941	SSH2	Q76I76	1423 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	USP19	O94966	1318 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	FAM83G	A6ND36	823 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	HSPA5	P11021	654 aa	Known RBP	11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	UNC5CL	Q8IV45	518 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	BTG4	Q9NY30	223 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	GLI3	P10071	1580 aa		11.69	□□□□□ -0.54
CTNNA1-231	ENST00000521941	TTC21A	Q8NDW8	1320 aa		11.68	□□□□□ -0.54
CTNNA1-231	ENST00000521941	SLC24A1	O60721	1099 aa		11.68	□□□□□ -0.54
CTNNA1-231	ENST00000521941	TERF2IP	Q9NYB0	399 aa		11.68	□□□□□ -0.54
CTNNA1-231	ENST00000521941	SLIT3	O75094	1523 aa		11.68	□□□□□ -0.54
CTNNA1-231	ENST00000521941	EDC4	Q6P2E9	1401 aa	Known RBP	11.68	□□□□□ -0.54
CTNNA1-231	ENST00000521941	NINL	Q9Y2I6	1382 aa		11.67	□□□□□ -0.54
CTNNA1-231	ENST00000521941	NME9	Q86XW9	330 aa		11.67	□□□□□ -0.54
CTNNA1-231	ENST00000521941	STRN4	Q9NRL3	753 aa		11.67	□□□□□ -0.54
CTNNA1-231	ENST00000521941	ZRANB1	Q9UGI0	708 aa		11.67	□□□□□ -0.54
CTNNA1-231	ENST00000521941	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNA1-231	ENST00000521941		A0A0G2JS52	829 aa		11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	GC	P02774	474 aa		11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	MYT1	Q01538	1121 aa		11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	CDCA8	Q53HL2	280 aa		11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	GJD4	Q96KN9	370 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	PUS7	Q96PZ0	661 aa	Known RBP	11.66	□□□□□ -0.54
CTNNA1-231	ENST00000521941	LMO7	Q8WWI1	1683 aa		11.65	□□□□□ -0.54
CTNNA1-231	ENST00000521941	ANKRD36B	Q8N2N9	1353 aa		11.65	□□□□□ -0.55
CTNNA1-231	ENST00000521941	USP54	Q70EL1	1684 aa		11.65	□□□□□ -0.55
CTNNA1-231	ENST00000521941	KIF20B	Q96Q89	1820 aa		11.65	□□□□□ -0.55
CTNNA1-231	ENST00000521941	VPS72	Q15906	364 aa		11.64	□□□□□ -0.55
CTNNA1-231	ENST00000521941	LTN1	O94822	1766 aa		11.64	□□□□□ -0.55
CTNNA1-231	ENST00000521941	RGPD5	Q99666	1765 aa		11.64	□□□□□ -0.55
CTNNA1-231	ENST00000521941	BRWD3	Q6RI45	1802 aa		11.63	□□□□□ -0.55
CTNNA1-231	ENST00000521941	CAMTA1	Q9Y6Y1	1673 aa		11.63	□□□□□ -0.55
CTNNA1-231	ENST00000521941	NFAT5	O94916	1531 aa		11.63	□□□□□ -0.55
CTNNA1-231	ENST00000521941	CPD	O75976	1380 aa		11.63	□□□□□ -0.55
CTNNA1-231	ENST00000521941	EVA1C	P58658	441 aa		11.62	□□□□□ -0.55
CTNNA1-231	ENST00000521941	USP35	Q9P2H5	1018 aa		11.62	□□□□□ -0.55
CTNNA1-231	ENST00000521941	OVOS2	A0A0J9YW53	1432 aa		11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	OVOS2	Q6IE36	1432 aa		11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	NSD3	Q9BZ95	1437 aa		11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	FAM98C	Q17RN3	349 aa	Known RBP	11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	KCNH5	Q8NCM2	988 aa		11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	COL5A2	P05997	1499 aa	Predicted RBP	11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	COL18A1	P39060	1754 aa		11.61	□□□□□ -0.55
CTNNA1-231	ENST00000521941	USP31	Q70CQ4	1352 aa		11.6	□□□□□ -0.55
CTNNA1-231	ENST00000521941	COG3	Q96JB2	828 aa		11.6	□□□□□ -0.55
CTNNA1-231	ENST00000521941	SPATA31A5	Q5VU36	1347 aa		11.6	□□□□□ -0.55
CTNNA1-231	ENST00000521941	SPATA31A7	Q8IWB4	1347 aa		11.6	□□□□□ -0.55
CTNNA1-231	ENST00000521941	LARP1	Q6PKG0	1096 aa	Known RBP	11.59	□□□□□ -0.55

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