RNA–Protein interactions for RNA: ENST00000521829.5

VPS37A-210, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS37A, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-210ENST00000521829 PLCH1Q4KWH8 1693 aa15.69■□□□□ 0.1
VPS37A-210ENST00000521829 ALS2Q96Q42 1657 aa15.68■□□□□ 0.1
VPS37A-210ENST00000521829 ATP7BP35670 1465 aa15.68■□□□□ 0.1
VPS37A-210ENST00000521829 SRPK2P78362 688 aaKnown RBP15.68■□□□□ 0.1
VPS37A-210ENST00000521829 SEPT12Q8IYM1 358 aa15.68■□□□□ 0.1
VPS37A-210ENST00000521829 BTG4Q9NY30 223 aa15.68■□□□□ 0.1
VPS37A-210ENST00000521829 GLI3P10071 1580 aa15.67■□□□□ 0.1
VPS37A-210ENST00000521829 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
VPS37A-210ENST00000521829 A0A0G2JS52 829 aa15.67■□□□□ 0.1
VPS37A-210ENST00000521829 MYT1Q01538 1121 aa15.67■□□□□ 0.1
VPS37A-210ENST00000521829 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
VPS37A-210ENST00000521829 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
VPS37A-210ENST00000521829 ACEP12821 1306 aa15.66■□□□□ 0.1
VPS37A-210ENST00000521829 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
VPS37A-210ENST00000521829 PRDM11Q9NQV5 511 aa15.66■□□□□ 0.1
VPS37A-210ENST00000521829 COL14A1Q05707 1796 aaKnown RBP15.65■□□□□ 0.1
VPS37A-210ENST00000521829 PLEKHG3A1L390 1219 aa15.65■□□□□ 0.1
VPS37A-210ENST00000521829 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
VPS37A-210ENST00000521829 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
VPS37A-210ENST00000521829 POLR3AO14802 1390 aaPredicted RBP15.63■□□□□ 0.09
VPS37A-210ENST00000521829 BRWD3Q6RI45 1802 aa15.63■□□□□ 0.09
VPS37A-210ENST00000521829 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
VPS37A-210ENST00000521829 NUTM2GQ5VZR2 741 aa15.63■□□□□ 0.09
VPS37A-210ENST00000521829 KRT27Q7Z3Y8 459 aa15.63■□□□□ 0.09
VPS37A-210ENST00000521829 ABTB2Q8N961 1025 aa15.62■□□□□ 0.09
VPS37A-210ENST00000521829 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
VPS37A-210ENST00000521829 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
VPS37A-210ENST00000521829 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
VPS37A-210ENST00000521829 QRICH2Q9H0J4 1663 aa15.6■□□□□ 0.09
VPS37A-210ENST00000521829 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
VPS37A-210ENST00000521829 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
VPS37A-210ENST00000521829 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
VPS37A-210ENST00000521829 NRAPQ86VF7 1730 aa15.6■□□□□ 0.09
VPS37A-210ENST00000521829 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
VPS37A-210ENST00000521829 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
VPS37A-210ENST00000521829 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
VPS37A-210ENST00000521829 EVA1CP58658 441 aa15.59■□□□□ 0.09
VPS37A-210ENST00000521829 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
VPS37A-210ENST00000521829 ROCK2O75116 1388 aaKnown RBP15.59■□□□□ 0.09
VPS37A-210ENST00000521829 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
VPS37A-210ENST00000521829 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.09
VPS37A-210ENST00000521829 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.09
VPS37A-210ENST00000521829 CHRNA2Q15822 529 aa15.58■□□□□ 0.08
VPS37A-210ENST00000521829 STRN4Q9NRL3 753 aa15.58■□□□□ 0.08
VPS37A-210ENST00000521829 SRCAPQ6ZRS2 3230 aa15.57■□□□□ 0.08
VPS37A-210ENST00000521829 CABP1Q9NZU7 370 aa15.57■□□□□ 0.08
VPS37A-210ENST00000521829 TRPM1Q7Z4N2 1603 aa15.57■□□□□ 0.08
VPS37A-210ENST00000521829 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
VPS37A-210ENST00000521829 BRD4O60885 1362 aaPredicted RBP15.56■□□□□ 0.08
VPS37A-210ENST00000521829 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
VPS37A-210ENST00000521829 GCP02774 474 aa15.53■□□□□ 0.08
VPS37A-210ENST00000521829 DEFB132Q7Z7B7 95 aa15.53■□□□□ 0.08
VPS37A-210ENST00000521829 EP400Q96L91 3159 aa15.53■□□□□ 0.08
VPS37A-210ENST00000521829 BAG6P46379 1132 aa15.52■□□□□ 0.08
VPS37A-210ENST00000521829 NLRP6P59044 892 aa15.52■□□□□ 0.08
VPS37A-210ENST00000521829 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
VPS37A-210ENST00000521829 USP19O94966 1318 aa15.52■□□□□ 0.07
VPS37A-210ENST00000521829 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
VPS37A-210ENST00000521829 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
VPS37A-210ENST00000521829 CPDO75976 1380 aa15.51■□□□□ 0.07
VPS37A-210ENST00000521829 USP6P35125 1406 aa15.51■□□□□ 0.07
VPS37A-210ENST00000521829 CARD11Q9BXL7 1154 aa15.5■□□□□ 0.07
VPS37A-210ENST00000521829 NRKQ7Z2Y5 1582 aa15.5■□□□□ 0.07
VPS37A-210ENST00000521829 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
VPS37A-210ENST00000521829 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
VPS37A-210ENST00000521829 SSH2Q76I76 1423 aa15.49■□□□□ 0.07
VPS37A-210ENST00000521829 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
VPS37A-210ENST00000521829 THSD7AQ9UPZ6 1657 aa15.48■□□□□ 0.07
VPS37A-210ENST00000521829 LARP1Q6PKG0 1096 aaKnown RBP15.47■□□□□ 0.07
VPS37A-210ENST00000521829 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
VPS37A-210ENST00000521829 BARGINQ6ZT62 677 aa15.47■□□□□ 0.07
VPS37A-210ENST00000521829 TCP11L2Q8N4U5 519 aa15.47■□□□□ 0.07
VPS37A-210ENST00000521829 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
VPS37A-210ENST00000521829 THRAP3Q9Y2W1 955 aaKnown RBP15.46■□□□□ 0.07
VPS37A-210ENST00000521829 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
VPS37A-210ENST00000521829 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.06
VPS37A-210ENST00000521829 TTC21BQ7Z4L5 1316 aa15.45■□□□□ 0.06
VPS37A-210ENST00000521829 LMO7Q8WWI1 1683 aa15.45■□□□□ 0.06
VPS37A-210ENST00000521829 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
VPS37A-210ENST00000521829 EN1Q05925 392 aaPredicted RBP15.44■□□□□ 0.06
VPS37A-210ENST00000521829 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
VPS37A-210ENST00000521829 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
VPS37A-210ENST00000521829 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
VPS37A-210ENST00000521829 TRIM37O94972 964 aa15.43■□□□□ 0.06
VPS37A-210ENST00000521829 AKAP12Q02952 1782 aa15.43■□□□□ 0.06
VPS37A-210ENST00000521829 SOX12O15370 315 aa15.43■□□□□ 0.06
VPS37A-210ENST00000521829 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
VPS37A-210ENST00000521829 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
VPS37A-210ENST00000521829 SLIT3O75094 1523 aa15.42■□□□□ 0.06
VPS37A-210ENST00000521829 COL5A2P05997 1499 aaPredicted RBP15.42■□□□□ 0.06
VPS37A-210ENST00000521829 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
VPS37A-210ENST00000521829 PIK3C2AO00443 1686 aa15.42■□□□□ 0.06
VPS37A-210ENST00000521829 CRB1P82279 1406 aa15.41■□□□□ 0.06
VPS37A-210ENST00000521829 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
VPS37A-210ENST00000521829 C11orf95C9JLR9 678 aaPredicted RBP15.41■□□□□ 0.06
VPS37A-210ENST00000521829 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
VPS37A-210ENST00000521829 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
VPS37A-210ENST00000521829 APBA3O96018 575 aa15.4■□□□□ 0.06
VPS37A-210ENST00000521829 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
VPS37A-210ENST00000521829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.064e-7■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms