RNA–Protein interactions for RNA: ENST00000521693.1

LAMA4-217, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-217ENST00000521693 GJA5P36382 358 aa9.74□□□□□ -0.85
LAMA4-217ENST00000521693 NNTQ13423 1086 aa9.74□□□□□ -0.85
LAMA4-217ENST00000521693 NPAS3Q8IXF0 933 aa9.74□□□□□ -0.85
LAMA4-217ENST00000521693 MPNDQ8N594 471 aa9.74□□□□□ -0.85
LAMA4-217ENST00000521693 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
LAMA4-217ENST00000521693 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
LAMA4-217ENST00000521693 RSBN1LQ6PCB5 846 aaPredicted RBP9.73□□□□□ -0.85
LAMA4-217ENST00000521693 IRF7Q92985 503 aa9.73□□□□□ -0.85
LAMA4-217ENST00000521693 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
LAMA4-217ENST00000521693 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
LAMA4-217ENST00000521693 FAM174AQ8TBP5 190 aa9.71□□□□□ -0.86
LAMA4-217ENST00000521693 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
LAMA4-217ENST00000521693 ADH1CP00326 375 aa9.7□□□□□ -0.86
LAMA4-217ENST00000521693 SCARF1Q14162 830 aa9.7□□□□□ -0.86
LAMA4-217ENST00000521693 PARP9Q8IXQ6 854 aa9.7□□□□□ -0.86
LAMA4-217ENST00000521693 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
LAMA4-217ENST00000521693 FAM181BA6NEQ2 426 aa9.69□□□□□ -0.86
LAMA4-217ENST00000521693 CFAP99D6REC4 459 aa9.69□□□□□ -0.86
LAMA4-217ENST00000521693 SPTLC1O15269 473 aa9.69□□□□□ -0.86
LAMA4-217ENST00000521693 GMPRP36959 345 aa9.69□□□□□ -0.86
LAMA4-217ENST00000521693 VEGFBP49765 207 aa9.69□□□□□ -0.86
LAMA4-217ENST00000521693 WDR4P57081 412 aaKnown RBP9.69□□□□□ -0.86
LAMA4-217ENST00000521693 MRPL14Q6P1L8 145 aaKnown RBP9.69□□□□□ -0.86
LAMA4-217ENST00000521693 H3BM21 787 aa9.68□□□□□ -0.86
LAMA4-217ENST00000521693 TIMP2P16035 220 aa9.68□□□□□ -0.86
LAMA4-217ENST00000521693 HRCP23327 699 aa9.68□□□□□ -0.86
LAMA4-217ENST00000521693 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
LAMA4-217ENST00000521693 TRIM66O15016 1216 aa9.66□□□□□ -0.86
LAMA4-217ENST00000521693 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
LAMA4-217ENST00000521693 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
LAMA4-217ENST00000521693 RIC3Q7Z5B4 369 aa9.66□□□□□ -0.86
LAMA4-217ENST00000521693 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
LAMA4-217ENST00000521693 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
LAMA4-217ENST00000521693 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
LAMA4-217ENST00000521693 AGERQ15109 404 aa9.65□□□□□ -0.86
LAMA4-217ENST00000521693 ZSCAN1Q8NBB4 408 aa9.65□□□□□ -0.86
LAMA4-217ENST00000521693 CDK15Q96Q40 435 aa9.65□□□□□ -0.86
LAMA4-217ENST00000521693 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
LAMA4-217ENST00000521693 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
LAMA4-217ENST00000521693 AK7Q96M32 723 aa9.64□□□□□ -0.87
LAMA4-217ENST00000521693 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
LAMA4-217ENST00000521693 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
LAMA4-217ENST00000521693 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
LAMA4-217ENST00000521693 NR5A1Q13285 461 aa9.62□□□□□ -0.87
LAMA4-217ENST00000521693 BPHLQ86WA6 291 aaPredicted RBP9.62□□□□□ -0.87
LAMA4-217ENST00000521693 TSC1Q92574 1164 aa9.62□□□□□ -0.87
LAMA4-217ENST00000521693 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
LAMA4-217ENST00000521693 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
LAMA4-217ENST00000521693 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
LAMA4-217ENST00000521693 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
LAMA4-217ENST00000521693 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
LAMA4-217ENST00000521693 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
LAMA4-217ENST00000521693 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
LAMA4-217ENST00000521693 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
LAMA4-217ENST00000521693 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
LAMA4-217ENST00000521693 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
LAMA4-217ENST00000521693 ARMC2Q8NEN0 867 aa9.59□□□□□ -0.87
LAMA4-217ENST00000521693 MAN1A2O60476 641 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 UPP2O95045 317 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 NR3C2P08235 984 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 GRM5P41594 1212 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 LIMD1Q9UGP4 676 aa9.58□□□□□ -0.88
LAMA4-217ENST00000521693 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
LAMA4-217ENST00000521693 QPCTQ16769 361 aa9.56□□□□□ -0.88
LAMA4-217ENST00000521693 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
LAMA4-217ENST00000521693 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
LAMA4-217ENST00000521693 LILRB3O75022 631 aa9.55□□□□□ -0.88
LAMA4-217ENST00000521693 BMP2P12643 396 aa9.55□□□□□ -0.88
LAMA4-217ENST00000521693 PDE4DQ08499 809 aa9.55□□□□□ -0.88
LAMA4-217ENST00000521693 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
LAMA4-217ENST00000521693 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
LAMA4-217ENST00000521693 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
LAMA4-217ENST00000521693 FSHRP23945 695 aa9.53□□□□□ -0.88
LAMA4-217ENST00000521693 SH3RF1Q7Z6J0 888 aa9.53□□□□□ -0.88
LAMA4-217ENST00000521693 C1QTNF2Q9BXJ5 285 aa9.53□□□□□ -0.88
LAMA4-217ENST00000521693 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
LAMA4-217ENST00000521693 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
LAMA4-217ENST00000521693 MEIOBQ8N635 442 aa9.52□□□□□ -0.89
LAMA4-217ENST00000521693 MAP4K5Q9Y4K4 846 aa9.52□□□□□ -0.89
LAMA4-217ENST00000521693 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
LAMA4-217ENST00000521693 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
LAMA4-217ENST00000521693 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
LAMA4-217ENST00000521693 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
LAMA4-217ENST00000521693 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
LAMA4-217ENST00000521693 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
LAMA4-217ENST00000521693 CCDC116Q8IYX3 515 aa9.49□□□□□ -0.89
LAMA4-217ENST00000521693 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
LAMA4-217ENST00000521693 GPKOWQ92917 476 aaPredicted RBP eCLIP9.48□□□□□ -0.89
LAMA4-217ENST00000521693 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
LAMA4-217ENST00000521693 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
LAMA4-217ENST00000521693 SOS2Q07890 1332 aaPredicted RBP9.48□□□□□ -0.89
LAMA4-217ENST00000521693 DNMT3LQ9UJW3 386 aa9.47□□□□□ -0.89
LAMA4-217ENST00000521693 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.9
LAMA4-217ENST00000521693 POLR3EQ9NVU0 708 aa9.46□□□□□ -0.9
LAMA4-217ENST00000521693 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
LAMA4-217ENST00000521693 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.9
LAMA4-217ENST00000521693 TTLL8A6PVC2 850 aa9.43□□□□□ -0.9
LAMA4-217ENST00000521693 CTDSPL2Q05D32 466 aa9.43□□□□□ -0.9
LAMA4-217ENST00000521693 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms