RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 AMER1Q5JTC6 1135 aaPredicted RBP22.42■■□□□ 1.18
LAMA4-216ENST00000521690 TTC21BQ7Z4L5 1316 aa22.41■■□□□ 1.18
LAMA4-216ENST00000521690 KRT28Q7Z3Y7 464 aa22.4■■□□□ 1.18
LAMA4-216ENST00000521690 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
LAMA4-216ENST00000521690 PXDNQ92626 1479 aa22.4■■□□□ 1.18
LAMA4-216ENST00000521690 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
LAMA4-216ENST00000521690 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.17
LAMA4-216ENST00000521690 SBNO1A3KN83 1393 aa22.38■■□□□ 1.17
LAMA4-216ENST00000521690 SOS2Q07890 1332 aaPredicted RBP22.37■■□□□ 1.17
LAMA4-216ENST00000521690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.37■■□□□ 1.17
LAMA4-216ENST00000521690 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
LAMA4-216ENST00000521690 FYB1O15117 783 aa22.36■■□□□ 1.17
LAMA4-216ENST00000521690 ANP32CO43423 234 aa22.35■■□□□ 1.17
LAMA4-216ENST00000521690 PIK3C2AO00443 1686 aa22.34■■□□□ 1.17
LAMA4-216ENST00000521690 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
LAMA4-216ENST00000521690 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
LAMA4-216ENST00000521690 ALS2Q96Q42 1657 aa22.33■■□□□ 1.17
LAMA4-216ENST00000521690 PAK3O75914 559 aaPredicted RBP22.33■■□□□ 1.17
LAMA4-216ENST00000521690 PIP4K2BP78356 416 aa22.33■■□□□ 1.17
LAMA4-216ENST00000521690 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.17
LAMA4-216ENST00000521690 RALBP1Q15311 655 aa22.32■■□□□ 1.16
LAMA4-216ENST00000521690 CC2D1BQ5T0F9 858 aaKnown RBP22.32■■□□□ 1.16
LAMA4-216ENST00000521690 NME9Q86XW9 330 aa22.32■■□□□ 1.16
LAMA4-216ENST00000521690 DDX17Q92841 729 aaKnown RBP22.32■■□□□ 1.16
LAMA4-216ENST00000521690 TNS3Q68CZ2 1445 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 ABTB2Q8N961 1025 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
LAMA4-216ENST00000521690 OVOS2A0A0J9YW53 1432 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 OVOS2Q6IE36 1432 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
LAMA4-216ENST00000521690 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
LAMA4-216ENST00000521690 COG3Q96JB2 828 aa22.3■■□□□ 1.16
LAMA4-216ENST00000521690 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
LAMA4-216ENST00000521690 SCAF1Q9H7N4 1312 aaKnown RBP22.29■■□□□ 1.16
LAMA4-216ENST00000521690 PHLPP1O60346 1717 aa22.28■■□□□ 1.16
LAMA4-216ENST00000521690 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
LAMA4-216ENST00000521690 NLRP6P59044 892 aa22.27■■□□□ 1.16
LAMA4-216ENST00000521690 NLRP13Q86W25 1043 aa22.27■■□□□ 1.16
LAMA4-216ENST00000521690 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
LAMA4-216ENST00000521690 COL16A1Q07092 1604 aaPredicted RBP22.26■■□□□ 1.15
LAMA4-216ENST00000521690 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
LAMA4-216ENST00000521690 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
LAMA4-216ENST00000521690 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
LAMA4-216ENST00000521690 LMOD2Q6P5Q4 547 aa22.23■■□□□ 1.15
LAMA4-216ENST00000521690 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
LAMA4-216ENST00000521690 USP19O94966 1318 aa22.23■■□□□ 1.15
LAMA4-216ENST00000521690 SLIT3O75094 1523 aa22.22■■□□□ 1.15
LAMA4-216ENST00000521690 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
LAMA4-216ENST00000521690 AATKQ6ZMQ8 1374 aa22.22■■□□□ 1.15
LAMA4-216ENST00000521690 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
LAMA4-216ENST00000521690 KCNH5Q8NCM2 988 aa22.2■■□□□ 1.14
LAMA4-216ENST00000521690 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
LAMA4-216ENST00000521690 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
LAMA4-216ENST00000521690 PPP2R1AP30153 589 aa22.18■■□□□ 1.14
LAMA4-216ENST00000521690 PHRF1Q9P1Y6 1649 aaKnown RBP22.17■■□□□ 1.14
LAMA4-216ENST00000521690 MIER1Q8N108 512 aa22.17■■□□□ 1.14
LAMA4-216ENST00000521690 PNPLA6Q8IY17 1366 aa22.16■■□□□ 1.14
LAMA4-216ENST00000521690 NFAT5O94916 1531 aa22.16■■□□□ 1.14
LAMA4-216ENST00000521690 TNNT2P45379 298 aaPredicted RBP22.15■■□□□ 1.14
LAMA4-216ENST00000521690 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
LAMA4-216ENST00000521690 SHPRHQ149N8 1683 aa22.14■■□□□ 1.14
LAMA4-216ENST00000521690 CCER2I3L3R5 266 aa22.14■■□□□ 1.13
LAMA4-216ENST00000521690 GCP02774 474 aa22.14■■□□□ 1.13
LAMA4-216ENST00000521690 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
LAMA4-216ENST00000521690 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
LAMA4-216ENST00000521690 JCADQ9P266 1359 aa22.12■■□□□ 1.13
LAMA4-216ENST00000521690 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
LAMA4-216ENST00000521690 MAP2P11137 1827 aaKnown RBP22.12■■□□□ 1.13
LAMA4-216ENST00000521690 HSPA1LP34931 641 aa22.1■■□□□ 1.13
LAMA4-216ENST00000521690 MTHFSP49914 203 aa22.1■■□□□ 1.13
LAMA4-216ENST00000521690 FBXO41Q8TF61 875 aa22.1■■□□□ 1.13
LAMA4-216ENST00000521690 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
LAMA4-216ENST00000521690 CPDO75976 1380 aa22.09■■□□□ 1.13
LAMA4-216ENST00000521690 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
LAMA4-216ENST00000521690 LTN1O94822 1766 aa22.08■■□□□ 1.13
LAMA4-216ENST00000521690 SOX12O15370 315 aa22.08■■□□□ 1.13
LAMA4-216ENST00000521690 CABLES1Q8TDN4 633 aa22.08■■□□□ 1.13
LAMA4-216ENST00000521690 RTL1A6NKG5 1358 aa22.08■■□□□ 1.12
LAMA4-216ENST00000521690 INSRP06213 1382 aa22.08■■□□□ 1.12
LAMA4-216ENST00000521690 ABCC6O95255 1503 aa22.07■■□□□ 1.12
LAMA4-216ENST00000521690 FBLN1P23142 703 aa22.07■■□□□ 1.12
LAMA4-216ENST00000521690 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
LAMA4-216ENST00000521690 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
LAMA4-216ENST00000521690 ARHGEF25Q86VW2 580 aa22.07■■□□□ 1.12
LAMA4-216ENST00000521690 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
LAMA4-216ENST00000521690 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
LAMA4-216ENST00000521690 FLT4P35916 1363 aa22.06■■□□□ 1.12
LAMA4-216ENST00000521690 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
LAMA4-216ENST00000521690 PEAK1Q9H792 1746 aa22.04■■□□□ 1.12
LAMA4-216ENST00000521690 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
LAMA4-216ENST00000521690 PPM1GO15355 546 aaPredicted RBP22.03■■□□□ 1.12
LAMA4-216ENST00000521690 AMPHP49418 695 aa22.03■■□□□ 1.12
LAMA4-216ENST00000521690 MRS2Q9HD23 443 aa22.03■■□□□ 1.12
LAMA4-216ENST00000521690 ZC3H6P61129 1189 aaKnown RBP22.02■■□□□ 1.12
LAMA4-216ENST00000521690 IP6K1Q92551 441 aa22.02■■□□□ 1.12
LAMA4-216ENST00000521690 KIAA0232Q92628 1395 aa22.01■■□□□ 1.11
LAMA4-216ENST00000521690 BLMP54132 1417 aaPredicted RBP22.01■■□□□ 1.11
LAMA4-216ENST00000521690 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
LAMA4-216ENST00000521690 HOXC9P31274 260 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms