RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
CSMD1-210ENST00000521646 ATMINO43313 823 aaPredicted RBP16.76■□□□□ 0.27
CSMD1-210ENST00000521646 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
CSMD1-210ENST00000521646 IFNL1Q8IU54 200 aa16.76■□□□□ 0.27
CSMD1-210ENST00000521646 ATRNO75882 1429 aa16.76■□□□□ 0.27
CSMD1-210ENST00000521646 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
CSMD1-210ENST00000521646 BCL9LQ86UU0 1499 aa16.75■□□□□ 0.27
CSMD1-210ENST00000521646 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
CSMD1-210ENST00000521646 TECPR2O15040 1411 aa16.75■□□□□ 0.27
CSMD1-210ENST00000521646 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-210ENST00000521646 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
CSMD1-210ENST00000521646 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-210ENST00000521646 MARF1Q9Y4F3 1742 aaKnown RBP16.73■□□□□ 0.27
CSMD1-210ENST00000521646 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
CSMD1-210ENST00000521646 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
CSMD1-210ENST00000521646 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
CSMD1-210ENST00000521646 USP21Q9UK80 565 aa16.72■□□□□ 0.27
CSMD1-210ENST00000521646 KNDC1Q76NI1 1749 aa16.72■□□□□ 0.27
CSMD1-210ENST00000521646 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 FOXO3O43524 673 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 TIE1P35590 1138 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 STK26Q9P289 416 aa16.71■□□□□ 0.27
CSMD1-210ENST00000521646 RGPD8O14715 1765 aaPredicted RBP16.7■□□□□ 0.26
CSMD1-210ENST00000521646 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
CSMD1-210ENST00000521646 LHX8Q68G74 356 aa16.7■□□□□ 0.26
CSMD1-210ENST00000521646 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
CSMD1-210ENST00000521646 ATN1P54259 1190 aaPredicted RBP16.69■□□□□ 0.26
CSMD1-210ENST00000521646 GLI3P10071 1580 aa16.68■□□□□ 0.26
CSMD1-210ENST00000521646 PCDHB8Q9UN66 801 aa16.68■□□□□ 0.26
CSMD1-210ENST00000521646 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
CSMD1-210ENST00000521646 ABCC11Q96J66 1382 aa16.67■□□□□ 0.26
CSMD1-210ENST00000521646 MPHOSPH9Q99550 1183 aa16.67■□□□□ 0.26
CSMD1-210ENST00000521646 CHRM1P11229 460 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-210ENST00000521646 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
CSMD1-210ENST00000521646 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-210ENST00000521646 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
CSMD1-210ENST00000521646 NPHP3Q7Z494 1330 aa16.66■□□□□ 0.26
CSMD1-210ENST00000521646 SLIT2O94813 1529 aa16.65■□□□□ 0.26
CSMD1-210ENST00000521646 USP32Q8NFA0 1604 aa16.64■□□□□ 0.25
CSMD1-210ENST00000521646 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.64■□□□□ 0.25
CSMD1-210ENST00000521646 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
CSMD1-210ENST00000521646 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
CSMD1-210ENST00000521646 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
CSMD1-210ENST00000521646 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
CSMD1-210ENST00000521646 BRWD3Q6RI45 1802 aa16.63■□□□□ 0.25
CSMD1-210ENST00000521646 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
CSMD1-210ENST00000521646 SLC39A7Q92504 469 aa16.62■□□□□ 0.25
CSMD1-210ENST00000521646 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
CSMD1-210ENST00000521646 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
CSMD1-210ENST00000521646 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
CSMD1-210ENST00000521646 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
CSMD1-210ENST00000521646 C7P10643 843 aa16.6■□□□□ 0.25
CSMD1-210ENST00000521646 ZNF467Q7Z7K2 595 aaPredicted RBP16.6■□□□□ 0.25
CSMD1-210ENST00000521646 CABLES1Q8TDN4 633 aa16.6■□□□□ 0.25
CSMD1-210ENST00000521646 GJD4Q96KN9 370 aaPredicted RBP16.6■□□□□ 0.25
CSMD1-210ENST00000521646 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
CSMD1-210ENST00000521646 METRNQ9UJH8 293 aa16.59■□□□□ 0.25
CSMD1-210ENST00000521646 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
CSMD1-210ENST00000521646 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
CSMD1-210ENST00000521646 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSMD1-210ENST00000521646 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
CSMD1-210ENST00000521646 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
CSMD1-210ENST00000521646 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
CSMD1-210ENST00000521646 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
CSMD1-210ENST00000521646 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
CSMD1-210ENST00000521646 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
CSMD1-210ENST00000521646 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
CSMD1-210ENST00000521646 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
CSMD1-210ENST00000521646 NRAPQ86VF7 1730 aa16.53■□□□□ 0.24
CSMD1-210ENST00000521646 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
CSMD1-210ENST00000521646 SIRT1Q96EB6 747 aa16.53■□□□□ 0.24
CSMD1-210ENST00000521646 DLC1Q96QB1 1528 aa16.52■□□□□ 0.24
CSMD1-210ENST00000521646 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.24
CSMD1-210ENST00000521646 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
CSMD1-210ENST00000521646 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
CSMD1-210ENST00000521646 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
CSMD1-210ENST00000521646 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
CSMD1-210ENST00000521646 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
CSMD1-210ENST00000521646 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
CSMD1-210ENST00000521646 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
CSMD1-210ENST00000521646 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
CSMD1-210ENST00000521646 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
CSMD1-210ENST00000521646 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
CSMD1-210ENST00000521646 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
CSMD1-210ENST00000521646 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
CSMD1-210ENST00000521646 SEC24BO95487 1268 aa16.47■□□□□ 0.23
CSMD1-210ENST00000521646 VPS72Q15906 364 aa16.47■□□□□ 0.23
CSMD1-210ENST00000521646 ANKARQ7Z5J8 1434 aa16.46■□□□□ 0.23
CSMD1-210ENST00000521646 PSEN1P49768 467 aa16.46■□□□□ 0.23
CSMD1-210ENST00000521646 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
CSMD1-210ENST00000521646 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
CSMD1-210ENST00000521646 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
CSMD1-210ENST00000521646 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
CSMD1-210ENST00000521646 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
CSMD1-210ENST00000521646 FAM182BQ5T319 152 aa16.43■□□□□ 0.22
CSMD1-210ENST00000521646 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
CSMD1-210ENST00000521646 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
CSMD1-210ENST00000521646 ARHGEF10O15013 1369 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms