RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 ADGRB2O60241 1585 aa17.24■□□□□ 0.35
NEFM-205ENST00000521540 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
NEFM-205ENST00000521540 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
NEFM-205ENST00000521540 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
NEFM-205ENST00000521540 STK26Q9P289 416 aa17.22■□□□□ 0.35
NEFM-205ENST00000521540 METP08581 1390 aa17.22■□□□□ 0.35
NEFM-205ENST00000521540 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
NEFM-205ENST00000521540 BCAR3O75815 825 aa17.22■□□□□ 0.35
NEFM-205ENST00000521540 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
NEFM-205ENST00000521540 POGKQ9P215 609 aa17.22■□□□□ 0.35
NEFM-205ENST00000521540 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
NEFM-205ENST00000521540 DDRGK1Q96HY6 314 aa17.21■□□□□ 0.35
NEFM-205ENST00000521540 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
NEFM-205ENST00000521540 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
NEFM-205ENST00000521540 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
NEFM-205ENST00000521540 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
NEFM-205ENST00000521540 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
NEFM-205ENST00000521540 XRN1Q8IZH2 1706 aaKnown RBP17.19■□□□□ 0.34
NEFM-205ENST00000521540 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
NEFM-205ENST00000521540 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
NEFM-205ENST00000521540 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
NEFM-205ENST00000521540 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
NEFM-205ENST00000521540 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
NEFM-205ENST00000521540 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
NEFM-205ENST00000521540 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
NEFM-205ENST00000521540 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
NEFM-205ENST00000521540 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
NEFM-205ENST00000521540 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
NEFM-205ENST00000521540 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
NEFM-205ENST00000521540 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
NEFM-205ENST00000521540 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
NEFM-205ENST00000521540 CD163L1Q9NR16 1453 aa17.16■□□□□ 0.34
NEFM-205ENST00000521540 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
NEFM-205ENST00000521540 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
NEFM-205ENST00000521540 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
NEFM-205ENST00000521540 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
NEFM-205ENST00000521540 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
NEFM-205ENST00000521540 ATP7BP35670 1465 aa17.15■□□□□ 0.34
NEFM-205ENST00000521540 TECPR2O15040 1411 aa17.15■□□□□ 0.34
NEFM-205ENST00000521540 KCNA6P17658 529 aa17.14■□□□□ 0.33
NEFM-205ENST00000521540 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
NEFM-205ENST00000521540 FYB1O15117 783 aa17.14■□□□□ 0.33
NEFM-205ENST00000521540 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
NEFM-205ENST00000521540 CPS1P31327 1500 aa17.14■□□□□ 0.33
NEFM-205ENST00000521540 IL16Q14005 1332 aa17.13■□□□□ 0.33
NEFM-205ENST00000521540 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
NEFM-205ENST00000521540 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
NEFM-205ENST00000521540 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
NEFM-205ENST00000521540 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
NEFM-205ENST00000521540 PNPLA6Q8IY17 1366 aa17.12■□□□□ 0.33
NEFM-205ENST00000521540 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
NEFM-205ENST00000521540 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
NEFM-205ENST00000521540 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
NEFM-205ENST00000521540 VIRMAQ69YN4 1812 aaKnown RBP17.11■□□□□ 0.33
NEFM-205ENST00000521540 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
NEFM-205ENST00000521540 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
NEFM-205ENST00000521540 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
NEFM-205ENST00000521540 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
NEFM-205ENST00000521540 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
NEFM-205ENST00000521540 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
NEFM-205ENST00000521540 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
NEFM-205ENST00000521540 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
NEFM-205ENST00000521540 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
NEFM-205ENST00000521540 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
NEFM-205ENST00000521540 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.33
NEFM-205ENST00000521540 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.33
NEFM-205ENST00000521540 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.33
NEFM-205ENST00000521540 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
NEFM-205ENST00000521540 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
NEFM-205ENST00000521540 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
NEFM-205ENST00000521540 IGHDP01880 384 aa17.06■□□□□ 0.32
NEFM-205ENST00000521540 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
NEFM-205ENST00000521540 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
NEFM-205ENST00000521540 FCHSD2O94868 740 aa17.05■□□□□ 0.32
NEFM-205ENST00000521540 RGS3P49796 1198 aa17.05■□□□□ 0.32
NEFM-205ENST00000521540 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
NEFM-205ENST00000521540 NBR1Q14596 966 aa17.04■□□□□ 0.32
NEFM-205ENST00000521540 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
NEFM-205ENST00000521540 NEFMP07197 916 aa17.03■□□□□ 0.32
NEFM-205ENST00000521540 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
NEFM-205ENST00000521540 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
NEFM-205ENST00000521540 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
NEFM-205ENST00000521540 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
NEFM-205ENST00000521540 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
NEFM-205ENST00000521540 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
NEFM-205ENST00000521540 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.32
NEFM-205ENST00000521540 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
NEFM-205ENST00000521540 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
NEFM-205ENST00000521540 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
NEFM-205ENST00000521540 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
NEFM-205ENST00000521540 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.31
NEFM-205ENST00000521540 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
NEFM-205ENST00000521540 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
NEFM-205ENST00000521540 MAP2P11137 1827 aaKnown RBP17.01■□□□□ 0.31
NEFM-205ENST00000521540 RIPK4P57078 832 aa17.01■□□□□ 0.31
NEFM-205ENST00000521540 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
NEFM-205ENST00000521540 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
NEFM-205ENST00000521540 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
NEFM-205ENST00000521540 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
NEFM-205ENST00000521540 RLBP1P12271 317 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms