RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
HMGN1P28-201ENST00000521340 PODXL2Q9NZ53 605 aa6.5□□□□□ -1.37
HMGN1P28-201ENST00000521340 ATP1B4Q9UN42 357 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P28-201ENST00000521340 TNFRSF10AO00220 468 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 DGAT1O75907 488 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 MYT1Q01538 1121 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 ZNF787Q6DD87 383 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 BRICD5Q6PL45 260 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 LRRN4Q8WUT4 740 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 SYMPKQ92797 1274 aaKnown RBP6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 TRAIPQ9BWF2 469 aa6.49□□□□□ -1.37
HMGN1P28-201ENST00000521340 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 NUTM2EB1AL46 878 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 ABL2P42684 1182 aa6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 MTMR2Q13614 643 aa6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 NUTM2DQ5VT03 806 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 NUTM2AQ8IVF1 878 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 PKD2L1Q9P0L9 805 aa6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 SALL2Q9Y467 1007 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P28-201ENST00000521340 FMNL1O95466 1100 aaPredicted RBP6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 PKDCCQ504Y2 493 aa6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 RNF19BQ6ZMZ0 732 aa6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 GLMNQ92990 594 aa6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 ALG2Q9H553 416 aa6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRDM9Q9NQV7 894 aa6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 FCF1Q9Y324 198 aaKnown RBP6.47□□□□□ -1.37
HMGN1P28-201ENST00000521340 POTECB2RU33 542 aa6.46□□□□□ -1.38
HMGN1P28-201ENST00000521340 PER1O15534 1290 aaPredicted RBP6.46□□□□□ -1.38
HMGN1P28-201ENST00000521340 RPIAP49247 311 aa6.46□□□□□ -1.38
HMGN1P28-201ENST00000521340 CCDC97Q96F63 343 aaPredicted RBP6.46□□□□□ -1.38
HMGN1P28-201ENST00000521340 FAM187AA6NFU0 413 aa6.45□□□□□ -1.38
HMGN1P28-201ENST00000521340 FOXC1Q12948 553 aa6.45□□□□□ -1.38
HMGN1P28-201ENST00000521340 CFAP70Q5T0N1 1121 aa6.45□□□□□ -1.38
HMGN1P28-201ENST00000521340 NDUFB9Q9Y6M9 179 aa6.45□□□□□ -1.38
HMGN1P28-201ENST00000521340 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
HMGN1P28-201ENST00000521340 HDGFL1Q5TGJ6 251 aa6.44□□□□□ -1.38
HMGN1P28-201ENST00000521340 DESI1Q6ICB0 168 aa6.44□□□□□ -1.38
HMGN1P28-201ENST00000521340 ZNF775Q96BV0 537 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P28-201ENST00000521340 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
HMGN1P28-201ENST00000521340 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
HMGN1P28-201ENST00000521340 PRR7Q8TB68 274 aa6.43□□□□□ -1.38
HMGN1P28-201ENST00000521340 CALR3Q96L12 384 aaKnown RBP6.43□□□□□ -1.38
HMGN1P28-201ENST00000521340 UCN2Q96RP3 112 aa6.43□□□□□ -1.38
HMGN1P28-201ENST00000521340 ST8SIA5O15466 376 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 PPP1R15AO75807 674 aaPredicted RBP6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 CD2BP2O95400 341 aaKnown RBP6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 NR6A1Q15406 480 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 WASHC4Q2M389 1173 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 LYPD8Q6UX82 237 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 AAASQ9NRG9 546 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 TOR4AQ9NXH8 423 aa6.42□□□□□ -1.38
HMGN1P28-201ENST00000521340 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
HMGN1P28-201ENST00000521340 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
HMGN1P28-201ENST00000521340 RETREG3Q86VR2 466 aa6.41□□□□□ -1.38
HMGN1P28-201ENST00000521340 MMP16P51512 607 aa6.4□□□□□ -1.38
HMGN1P28-201ENST00000521340 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
HMGN1P28-201ENST00000521340 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P28-201ENST00000521340 PRM3Q9NNZ6 103 aa6.4□□□□□ -1.38
HMGN1P28-201ENST00000521340 F12P00748 615 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P28-201ENST00000521340 Q3C1V9 767 aa6.39□□□□□ -1.39
HMGN1P28-201ENST00000521340 PPP1R12CQ9BZL4 782 aa6.39□□□□□ -1.39
HMGN1P28-201ENST00000521340 DACH1Q9UI36 760 aa6.39□□□□□ -1.39
HMGN1P28-201ENST00000521340 AVPP01185 164 aa6.38□□□□□ -1.39
HMGN1P28-201ENST00000521340 USB1Q9BQ65 265 aaKnown RBP6.38□□□□□ -1.39
HMGN1P28-201ENST00000521340 ZBTB24O43167 697 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P28-201ENST00000521340 DXOO77932 396 aaKnown RBP6.37□□□□□ -1.39
HMGN1P28-201ENST00000521340 WWC1Q8IX03 1113 aa6.37□□□□□ -1.39
HMGN1P28-201ENST00000521340 CYP4X1Q8N118 509 aa6.37□□□□□ -1.39
HMGN1P28-201ENST00000521340 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P28-201ENST00000521340 PALM3A6NDB9 673 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P28-201ENST00000521340 TRIM32Q13049 653 aa6.36□□□□□ -1.39
HMGN1P28-201ENST00000521340 CRIPAKQ8N1N5 446 aa6.36□□□□□ -1.39
HMGN1P28-201ENST00000521340 PBXIP1Q96AQ6 731 aa6.36□□□□□ -1.39
HMGN1P28-201ENST00000521340 WNT7AO00755 349 aa6.35□□□□□ -1.39
HMGN1P28-201ENST00000521340 OCSTAMPQ9BR26 566 aa6.35□□□□□ -1.39
HMGN1P28-201ENST00000521340 TFIP11Q9UBB9 837 aaKnown RBP6.35□□□□□ -1.39
HMGN1P28-201ENST00000521340 FBXO45P0C2W1 286 aa6.34□□□□□ -1.39
HMGN1P28-201ENST00000521340 SMPD1P17405 629 aa6.34□□□□□ -1.39
HMGN1P28-201ENST00000521340 SOX11P35716 441 aa6.34□□□□□ -1.39
HMGN1P28-201ENST00000521340 MAFBQ9Y5Q3 323 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P28-201ENST00000521340 TTC24A2A3L6 582 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 TMEM88BA6NKF7 163 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 SKOR1P84550 965 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 TBC1D9Q6ZT07 1266 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 KCTD17Q8N5Z5 321 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 TSC1Q92574 1164 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 MRGPRX2Q96LB1 330 aa6.33□□□□□ -1.4
HMGN1P28-201ENST00000521340 CARNS1A5YM72 827 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 J3QL48 77 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 AXIN1O15169 862 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 ATG7O95352 703 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 NR1H3Q13133 447 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 SNIP1Q8TAD8 396 aaKnown RBP6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 MAP10Q9P2G4 905 aa6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 GMPR2Q9P2T1 348 aaKnown RBP6.32□□□□□ -1.4
HMGN1P28-201ENST00000521340 JUNDP17535 347 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms