RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
PCM1-214ENST00000521338 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
PCM1-214ENST00000521338 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
PCM1-214ENST00000521338 MTMR2Q13614 643 aa8.47□□□□□ -1.05
PCM1-214ENST00000521338 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
PCM1-214ENST00000521338 VSIG8P0DPA2 414 aa8.45□□□□□ -1.06
PCM1-214ENST00000521338 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
PCM1-214ENST00000521338 CDK15Q96Q40 435 aa8.45□□□□□ -1.06
PCM1-214ENST00000521338 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
PCM1-214ENST00000521338 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
PCM1-214ENST00000521338 GJA5P36382 358 aa8.44□□□□□ -1.06
PCM1-214ENST00000521338 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
PCM1-214ENST00000521338 AMHR2Q16671 573 aa8.44□□□□□ -1.06
PCM1-214ENST00000521338 ADH1CP00326 375 aa8.43□□□□□ -1.06
PCM1-214ENST00000521338 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
PCM1-214ENST00000521338 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
PCM1-214ENST00000521338 SCARF1Q14162 830 aa8.42□□□□□ -1.06
PCM1-214ENST00000521338 GIGYF2Q6Y7W6 1299 aaKnown RBP8.42□□□□□ -1.06
PCM1-214ENST00000521338 VSIG10Q8N0Z9 540 aa8.42□□□□□ -1.06
PCM1-214ENST00000521338 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
PCM1-214ENST00000521338 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
PCM1-214ENST00000521338 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 ZMYND10O75800 440 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
PCM1-214ENST00000521338 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 BEGAINQ9BUH8 593 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
PCM1-214ENST00000521338 NR3C2P08235 984 aa8.4□□□□□ -1.06
PCM1-214ENST00000521338 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
PCM1-214ENST00000521338 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
PCM1-214ENST00000521338 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
PCM1-214ENST00000521338 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
PCM1-214ENST00000521338 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
PCM1-214ENST00000521338 CTHP32929 405 aa8.39□□□□□ -1.07
PCM1-214ENST00000521338 GRM5P41594 1212 aa8.39□□□□□ -1.07
PCM1-214ENST00000521338 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
PCM1-214ENST00000521338 SPTLC1O15269 473 aa8.38□□□□□ -1.07
PCM1-214ENST00000521338 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
PCM1-214ENST00000521338 HRCP23327 699 aa8.38□□□□□ -1.07
PCM1-214ENST00000521338 NR5A1Q13285 461 aa8.36□□□□□ -1.07
PCM1-214ENST00000521338 PER1O15534 1290 aaPredicted RBP8.35□□□□□ -1.07
PCM1-214ENST00000521338 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
PCM1-214ENST00000521338 GSK3AP49840 483 aa8.35□□□□□ -1.07
PCM1-214ENST00000521338 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
PCM1-214ENST00000521338 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
PCM1-214ENST00000521338 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
PCM1-214ENST00000521338 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
PCM1-214ENST00000521338 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
PCM1-214ENST00000521338 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
PCM1-214ENST00000521338 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
PCM1-214ENST00000521338 MAN1A2O60476 641 aa8.33□□□□□ -1.08
PCM1-214ENST00000521338 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
PCM1-214ENST00000521338 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
PCM1-214ENST00000521338 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
PCM1-214ENST00000521338 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
PCM1-214ENST00000521338 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
PCM1-214ENST00000521338 SH3RF1Q7Z6J0 888 aa8.32□□□□□ -1.08
PCM1-214ENST00000521338 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
PCM1-214ENST00000521338 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
PCM1-214ENST00000521338 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
PCM1-214ENST00000521338 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
PCM1-214ENST00000521338 KRT76Q01546 638 aa8.3□□□□□ -1.08
PCM1-214ENST00000521338 TRIM66O15016 1216 aa8.29□□□□□ -1.08
PCM1-214ENST00000521338 GPR161Q8N6U8 529 aaKnown RBP8.29□□□□□ -1.08
PCM1-214ENST00000521338 LIMD1Q9UGP4 676 aa8.29□□□□□ -1.08
PCM1-214ENST00000521338 BMP2P12643 396 aa8.28□□□□□ -1.08
PCM1-214ENST00000521338 AGERQ15109 404 aa8.28□□□□□ -1.08
PCM1-214ENST00000521338 SH3BP5LQ7L8J4 393 aa8.28□□□□□ -1.08
PCM1-214ENST00000521338 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
PCM1-214ENST00000521338 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
PCM1-214ENST00000521338 QPCTQ16769 361 aa8.27□□□□□ -1.09
PCM1-214ENST00000521338 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
PCM1-214ENST00000521338 LILRB3O75022 631 aa8.26□□□□□ -1.09
PCM1-214ENST00000521338 SUZ12Q15022 739 aaKnown RBP8.26□□□□□ -1.09
PCM1-214ENST00000521338 UPP2O95045 317 aa8.25□□□□□ -1.09
PCM1-214ENST00000521338 FSHRP23945 695 aa8.25□□□□□ -1.09
PCM1-214ENST00000521338 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
PCM1-214ENST00000521338 MYSM1Q5VVJ2 828 aa8.25□□□□□ -1.09
PCM1-214ENST00000521338 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
PCM1-214ENST00000521338 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
PCM1-214ENST00000521338 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
PCM1-214ENST00000521338 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
PCM1-214ENST00000521338 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
PCM1-214ENST00000521338 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
PCM1-214ENST00000521338 PTSQ03393 145 aa8.22□□□□□ -1.09
PCM1-214ENST00000521338 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.09
PCM1-214ENST00000521338 Q6ZVU0 165 aa8.22□□□□□ -1.09
PCM1-214ENST00000521338 CCDC116Q8IYX3 515 aa8.22□□□□□ -1.09
PCM1-214ENST00000521338 NANOS1Q8WY41 292 aaKnown RBP8.22□□□□□ -1.09
PCM1-214ENST00000521338 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 NBPF14Q5TI25 921 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 TSC1Q92574 1164 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 AK7Q96M32 723 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 CNTNAP3BQ96NU0 1288 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 CNTNAP3Q9BZ76 1288 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
PCM1-214ENST00000521338 NUTM2BA6NNL0 878 aaPredicted RBP8.2□□□□□ -1.1
PCM1-214ENST00000521338 NUTM2EB1AL46 878 aaPredicted RBP8.2□□□□□ -1.1
PCM1-214ENST00000521338 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms