RNA–Protein interactions for RNA: ENST00000520964.1

RTL8A-203, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 3

Gene RTL8A, Length 817 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-203ENST00000520964 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
RTL8A-203ENST00000520964 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
RTL8A-203ENST00000520964 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
RTL8A-203ENST00000520964 USP31Q70CQ4 1352 aa13.27□□□□□ -0.29
RTL8A-203ENST00000520964 OVOS2A0A0J9YW53 1432 aa13.27□□□□□ -0.29
RTL8A-203ENST00000520964 DCCP43146 1447 aa13.27□□□□□ -0.29
RTL8A-203ENST00000520964 OVOS2Q6IE36 1432 aa13.27□□□□□ -0.29
RTL8A-203ENST00000520964 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
RTL8A-203ENST00000520964 NME9Q86XW9 330 aa13.26□□□□□ -0.29
RTL8A-203ENST00000520964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
RTL8A-203ENST00000520964 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
RTL8A-203ENST00000520964 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
RTL8A-203ENST00000520964 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
RTL8A-203ENST00000520964 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
RTL8A-203ENST00000520964 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
RTL8A-203ENST00000520964 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
RTL8A-203ENST00000520964 COG3Q96JB2 828 aa13.24□□□□□ -0.29
RTL8A-203ENST00000520964 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
RTL8A-203ENST00000520964 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
RTL8A-203ENST00000520964 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
RTL8A-203ENST00000520964 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
RTL8A-203ENST00000520964 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
RTL8A-203ENST00000520964 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
RTL8A-203ENST00000520964 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
RTL8A-203ENST00000520964 XIRP1Q702N8 1843 aaKnown RBP13.22□□□□□ -0.29
RTL8A-203ENST00000520964 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
RTL8A-203ENST00000520964 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
RTL8A-203ENST00000520964 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
RTL8A-203ENST00000520964 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
RTL8A-203ENST00000520964 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.3
RTL8A-203ENST00000520964 MARF1Q9Y4F3 1742 aaKnown RBP13.2□□□□□ -0.3
RTL8A-203ENST00000520964 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
RTL8A-203ENST00000520964 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
RTL8A-203ENST00000520964 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
RTL8A-203ENST00000520964 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
RTL8A-203ENST00000520964 MST1RQ04912 1400 aa13.19□□□□□ -0.3
RTL8A-203ENST00000520964 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
RTL8A-203ENST00000520964 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
RTL8A-203ENST00000520964 IQSEC2Q5JU85 1478 aa13.17□□□□□ -0.3
RTL8A-203ENST00000520964 DIAPH1O60610 1272 aaKnown RBP13.17□□□□□ -0.3
RTL8A-203ENST00000520964 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
RTL8A-203ENST00000520964 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
RTL8A-203ENST00000520964 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
RTL8A-203ENST00000520964 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
RTL8A-203ENST00000520964 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
RTL8A-203ENST00000520964 ATF3P18847 181 aa13.15□□□□□ -0.3
RTL8A-203ENST00000520964 IL13P35225 146 aa13.15□□□□□ -0.3
RTL8A-203ENST00000520964 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
RTL8A-203ENST00000520964 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
RTL8A-203ENST00000520964 MSH6P52701 1360 aa13.15□□□□□ -0.3
RTL8A-203ENST00000520964 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
RTL8A-203ENST00000520964 APAF1O14727 1248 aa13.14□□□□□ -0.31
RTL8A-203ENST00000520964 FBLN1P23142 703 aa13.14□□□□□ -0.31
RTL8A-203ENST00000520964 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
RTL8A-203ENST00000520964 ORAI2Q96SN7 254 aa13.14□□□□□ -0.31
RTL8A-203ENST00000520964 FCHSD2O94868 740 aa13.13□□□□□ -0.31
RTL8A-203ENST00000520964 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
RTL8A-203ENST00000520964 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTL8A-203ENST00000520964 PSME1Q06323 249 aa13.13□□□□□ -0.31
RTL8A-203ENST00000520964 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
RTL8A-203ENST00000520964 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
RTL8A-203ENST00000520964 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
RTL8A-203ENST00000520964 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
RTL8A-203ENST00000520964 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
RTL8A-203ENST00000520964 NLRP6P59044 892 aa13.12□□□□□ -0.31
RTL8A-203ENST00000520964 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
RTL8A-203ENST00000520964 PHRF1Q9P1Y6 1649 aaKnown RBP13.11□□□□□ -0.31
RTL8A-203ENST00000520964 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
RTL8A-203ENST00000520964 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
RTL8A-203ENST00000520964 SLIT3O75094 1523 aa13.11□□□□□ -0.31
RTL8A-203ENST00000520964 NFAT5O94916 1531 aa13.11□□□□□ -0.31
RTL8A-203ENST00000520964 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
RTL8A-203ENST00000520964 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
RTL8A-203ENST00000520964 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 FLT4P35916 1363 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 FOXO3O43524 673 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 USP19O94966 1318 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
RTL8A-203ENST00000520964 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
RTL8A-203ENST00000520964 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
RTL8A-203ENST00000520964 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
RTL8A-203ENST00000520964 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
RTL8A-203ENST00000520964 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
RTL8A-203ENST00000520964 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
RTL8A-203ENST00000520964 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
RTL8A-203ENST00000520964 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
RTL8A-203ENST00000520964 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
RTL8A-203ENST00000520964 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
RTL8A-203ENST00000520964 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
RTL8A-203ENST00000520964 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
RTL8A-203ENST00000520964 PXDNQ92626 1479 aa13.07□□□□□ -0.32
RTL8A-203ENST00000520964 E9PSI1 815 aa13.06□□□□□ -0.32
RTL8A-203ENST00000520964 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms