RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 PRR36Q9H6K5 1346 aa11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
PDGFRB-208ENST00000520851 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 PSME1Q06323 249 aa11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 NGDNQ8NEJ9 315 aaKnown RBP11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
PDGFRB-208ENST00000520851 SHPRHQ149N8 1683 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 USP54Q70EL1 1684 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 ACEP12821 1306 aa11.6□□□□□ -0.55
PDGFRB-208ENST00000520851 PIP4K2BP78356 416 aa11.59□□□□□ -0.55
PDGFRB-208ENST00000520851 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-208ENST00000520851 COL16A1Q07092 1604 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-208ENST00000520851 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
PDGFRB-208ENST00000520851 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-208ENST00000520851 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
PDGFRB-208ENST00000520851 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
PDGFRB-208ENST00000520851 FBXO41Q8TF61 875 aa11.58□□□□□ -0.56
PDGFRB-208ENST00000520851 USP6P35125 1406 aa11.58□□□□□ -0.56
PDGFRB-208ENST00000520851 PXDNQ92626 1479 aa11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 FOXO3O43524 673 aa11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 SLC12A5Q9H2X9 1139 aa11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
PDGFRB-208ENST00000520851 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
PDGFRB-208ENST00000520851 MAP2P11137 1827 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-208ENST00000520851 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-208ENST00000520851 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
PDGFRB-208ENST00000520851 PIK3C2AO00443 1686 aa11.55□□□□□ -0.56
PDGFRB-208ENST00000520851 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
PDGFRB-208ENST00000520851 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
PDGFRB-208ENST00000520851 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
PDGFRB-208ENST00000520851 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-208ENST00000520851 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
PDGFRB-208ENST00000520851 TNS3Q68CZ2 1445 aa11.54□□□□□ -0.56
PDGFRB-208ENST00000520851 LTN1O94822 1766 aa11.54□□□□□ -0.56
PDGFRB-208ENST00000520851 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
PDGFRB-208ENST00000520851 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
PDGFRB-208ENST00000520851 SSH2Q76I76 1423 aa11.52□□□□□ -0.56
PDGFRB-208ENST00000520851 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 PANK3Q9H999 370 aa11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 KNSTRNQ9Y448 316 aa11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 CGNL1Q0VF96 1302 aa11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 NSD2O96028 1365 aa11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
PDGFRB-208ENST00000520851 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
PDGFRB-208ENST00000520851 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
PDGFRB-208ENST00000520851 NLRP13Q86W25 1043 aa11.5□□□□□ -0.57
PDGFRB-208ENST00000520851 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
PDGFRB-208ENST00000520851 JCADQ9P266 1359 aa11.5□□□□□ -0.57
PDGFRB-208ENST00000520851 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-208ENST00000520851 NPC1L1Q9UHC9 1359 aa11.49□□□□□ -0.57
PDGFRB-208ENST00000520851 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 LMOD2Q6P5Q4 547 aa11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 RGPD5Q99666 1765 aa11.48□□□□□ -0.57
PDGFRB-208ENST00000520851 SLIT3O75094 1523 aa11.47□□□□□ -0.57
PDGFRB-208ENST00000520851 SPATA31A6Q5VVP1 1343 aa11.47□□□□□ -0.57
PDGFRB-208ENST00000520851 PER1O15534 1290 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-208ENST00000520851 COG3Q96JB2 828 aa11.47□□□□□ -0.57
PDGFRB-208ENST00000520851 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
PDGFRB-208ENST00000520851 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.57
PDGFRB-208ENST00000520851 PNPLA6Q8IY17 1366 aa11.46□□□□□ -0.57
PDGFRB-208ENST00000520851 HSPA1LP34931 641 aa11.46□□□□□ -0.57
PDGFRB-208ENST00000520851 NLRP6P59044 892 aa11.46□□□□□ -0.57
PDGFRB-208ENST00000520851 KCNH5Q8NCM2 988 aa11.46□□□□□ -0.57
PDGFRB-208ENST00000520851 COL14A1Q05707 1796 aaKnown RBP11.46□□□□□ -0.58
PDGFRB-208ENST00000520851 OVOS2A0A0J9YW53 1432 aa11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 OVOS2Q6IE36 1432 aa11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 FYB1O15117 783 aa11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 ABCC6O95255 1503 aa11.45□□□□□ -0.58
PDGFRB-208ENST00000520851 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
PDGFRB-208ENST00000520851 USP19O94966 1318 aa11.43□□□□□ -0.58
PDGFRB-208ENST00000520851 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
PDGFRB-208ENST00000520851 NME9Q86XW9 330 aa11.43□□□□□ -0.58
PDGFRB-208ENST00000520851 PROM2Q8N271 834 aa11.43□□□□□ -0.58
PDGFRB-208ENST00000520851 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
PDGFRB-208ENST00000520851 NFAT5O94916 1531 aa11.42□□□□□ -0.58
PDGFRB-208ENST00000520851 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
PDGFRB-208ENST00000520851 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
PDGFRB-208ENST00000520851 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
PDGFRB-208ENST00000520851 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
PDGFRB-208ENST00000520851 COL18A1P39060 1754 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms