RNA–Protein interactions for RNA: ENST00000520848.1

IGHV3-36-201, Transcript of immunoglobulin heavy variable 3-36 (pseudogene), humanhuman

BASIC

Gene IGHV3-36, Length 401 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-36-201ENST00000520848 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
IGHV3-36-201ENST00000520848 GJD4Q96KN9 370 aaPredicted RBP12.75□□□□□ -0.37
IGHV3-36-201ENST00000520848 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
IGHV3-36-201ENST00000520848 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
IGHV3-36-201ENST00000520848 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
IGHV3-36-201ENST00000520848 ACEP12821 1306 aa12.74□□□□□ -0.37
IGHV3-36-201ENST00000520848 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
IGHV3-36-201ENST00000520848 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
IGHV3-36-201ENST00000520848 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
IGHV3-36-201ENST00000520848 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
IGHV3-36-201ENST00000520848 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
IGHV3-36-201ENST00000520848 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
IGHV3-36-201ENST00000520848 VPS72Q15906 364 aa12.71□□□□□ -0.37
IGHV3-36-201ENST00000520848 BRWD3Q6RI45 1802 aa12.7□□□□□ -0.38
IGHV3-36-201ENST00000520848 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
IGHV3-36-201ENST00000520848 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
IGHV3-36-201ENST00000520848 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
IGHV3-36-201ENST00000520848 SSH2Q76I76 1423 aa12.7□□□□□ -0.38
IGHV3-36-201ENST00000520848 SRPK2P78362 688 aaKnown RBP12.69□□□□□ -0.38
IGHV3-36-201ENST00000520848 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
IGHV3-36-201ENST00000520848 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
IGHV3-36-201ENST00000520848 USP19O94966 1318 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
IGHV3-36-201ENST00000520848 USP6P35125 1406 aa12.66□□□□□ -0.38
IGHV3-36-201ENST00000520848 BRD4O60885 1362 aaPredicted RBP12.66□□□□□ -0.38
IGHV3-36-201ENST00000520848 SBNO2Q9Y2G9 1366 aa12.66□□□□□ -0.38
IGHV3-36-201ENST00000520848 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
IGHV3-36-201ENST00000520848 TONSLQ96HA7 1378 aa12.65□□□□□ -0.38
IGHV3-36-201ENST00000520848 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
IGHV3-36-201ENST00000520848 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
IGHV3-36-201ENST00000520848 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
IGHV3-36-201ENST00000520848 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
IGHV3-36-201ENST00000520848 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
IGHV3-36-201ENST00000520848 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 SLIT3O75094 1523 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 CHRNA2Q15822 529 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 CPDO75976 1380 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
IGHV3-36-201ENST00000520848 GCP02774 474 aa12.62□□□□□ -0.39
IGHV3-36-201ENST00000520848 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
IGHV3-36-201ENST00000520848 FAM98CQ17RN3 349 aaKnown RBP12.61□□□□□ -0.39
IGHV3-36-201ENST00000520848 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
IGHV3-36-201ENST00000520848 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 NLRP13Q86W25 1043 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 COL18A1P39060 1754 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
IGHV3-36-201ENST00000520848 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
IGHV3-36-201ENST00000520848 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
IGHV3-36-201ENST00000520848 TESK2Q96S53 571 aa12.59□□□□□ -0.39
IGHV3-36-201ENST00000520848 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
IGHV3-36-201ENST00000520848 NLRP6P59044 892 aa12.58□□□□□ -0.4
IGHV3-36-201ENST00000520848 LARP1Q6PKG0 1096 aaKnown RBP12.57□□□□□ -0.4
IGHV3-36-201ENST00000520848 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
IGHV3-36-201ENST00000520848 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
IGHV3-36-201ENST00000520848 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
IGHV3-36-201ENST00000520848 NFAT5O94916 1531 aa12.56□□□□□ -0.4
IGHV3-36-201ENST00000520848 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
IGHV3-36-201ENST00000520848 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
IGHV3-36-201ENST00000520848 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
IGHV3-36-201ENST00000520848 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
IGHV3-36-201ENST00000520848 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
IGHV3-36-201ENST00000520848 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
IGHV3-36-201ENST00000520848 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
IGHV3-36-201ENST00000520848 ARHGEF25Q86VW2 580 aa12.54□□□□□ -0.4
IGHV3-36-201ENST00000520848 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
IGHV3-36-201ENST00000520848 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
IGHV3-36-201ENST00000520848 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
IGHV3-36-201ENST00000520848 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
IGHV3-36-201ENST00000520848 EVA1CP58658 441 aa12.53□□□□□ -0.4
IGHV3-36-201ENST00000520848 FAM182BQ5T319 152 aa12.53□□□□□ -0.4
IGHV3-36-201ENST00000520848 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
IGHV3-36-201ENST00000520848 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
IGHV3-36-201ENST00000520848 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
IGHV3-36-201ENST00000520848 A0A1W2PP64 1363 aa12.52□□□□□ -0.41
IGHV3-36-201ENST00000520848 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 A0A0G2JS52 829 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 MYT1Q01538 1121 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 NME9Q86XW9 330 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 CRB1P82279 1406 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
IGHV3-36-201ENST00000520848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
IGHV3-36-201ENST00000520848 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
IGHV3-36-201ENST00000520848 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms