RNA–Protein interactions for RNA: ENST00000520463.1

PCNX2-222, Transcript of pecanex 2, human

TSL 2

Gene PCNX2, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCNX2-222	ENST00000520463	BTG4	Q9NY30	223 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	NAIP	Q13075	1403 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	TNS3	Q68CZ2	1445 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	CHD4	Q14839	1912 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	RREB1	Q92766	1687 aa		11.24	□□□□□ -0.61
PCNX2-222	ENST00000520463	NRAP	Q86VF7	1730 aa		11.24	□□□□□ -0.61
PCNX2-222	ENST00000520463	SBNO1	A3KN83	1393 aa		11.24	□□□□□ -0.61
PCNX2-222	ENST00000520463	KIF1A	Q12756	1690 aa		11.23	□□□□□ -0.61
PCNX2-222	ENST00000520463	THSD7A	Q9UPZ6	1657 aa		11.23	□□□□□ -0.61
PCNX2-222	ENST00000520463	ARHGEF10	O15013	1369 aa		11.22	□□□□□ -0.61
PCNX2-222	ENST00000520463	NUP188	Q5SRE5	1749 aa		11.22	□□□□□ -0.61
PCNX2-222	ENST00000520463	ABCA3	Q99758	1704 aa		11.21	□□□□□ -0.61
PCNX2-222	ENST00000520463	RPGRIP1L	Q68CZ1	1315 aa		11.21	□□□□□ -0.61
PCNX2-222	ENST00000520463	FAM50A	Q14320	339 aa	Known RBP	11.21	□□□□□ -0.61
PCNX2-222	ENST00000520463	WAPL	Q7Z5K2	1190 aa		11.21	□□□□□ -0.61
PCNX2-222	ENST00000520463	ROCK1	Q13464	1354 aa		11.2	□□□□□ -0.62
PCNX2-222	ENST00000520463	PHF8	Q9UPP1	1060 aa		11.2	□□□□□ -0.62
PCNX2-222	ENST00000520463	TECPR2	O15040	1411 aa		11.19	□□□□□ -0.62
PCNX2-222	ENST00000520463	KIF1B	O60333	1816 aa		11.19	□□□□□ -0.62
PCNX2-222	ENST00000520463	FMN2	Q9NZ56	1722 aa		11.19	□□□□□ -0.62
PCNX2-222	ENST00000520463	CLTCL1	P53675	1640 aa		11.19	□□□□□ -0.62
PCNX2-222	ENST00000520463	RRBP1	Q9P2E9	1410 aa	Known RBP	11.18	□□□□□ -0.62
PCNX2-222	ENST00000520463	COL14A1	Q05707	1796 aa	Known RBP	11.18	□□□□□ -0.62
PCNX2-222	ENST00000520463	SPATA31A1	Q5TZJ5	1347 aa		11.18	□□□□□ -0.62
PCNX2-222	ENST00000520463	PLEKHG5	O94827	1062 aa		11.18	□□□□□ -0.62
PCNX2-222	ENST00000520463	LMOD2	Q6P5Q4	547 aa		11.18	□□□□□ -0.62
PCNX2-222	ENST00000520463	ABCC11	Q96J66	1382 aa		11.17	□□□□□ -0.62
PCNX2-222	ENST00000520463	SYT17	Q9BSW7	474 aa		11.17	□□□□□ -0.62
PCNX2-222	ENST00000520463	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.17	□□□□□ -0.62
PCNX2-222	ENST00000520463	GIGYF1	O75420	1035 aa	Predicted RBP	11.16	□□□□□ -0.62
PCNX2-222	ENST00000520463	PTGER2	P43116	358 aa		11.16	□□□□□ -0.62
PCNX2-222	ENST00000520463	CHRDL2	Q6WN34	429 aa		11.16	□□□□□ -0.62
PCNX2-222	ENST00000520463	NRXN1	Q9ULB1	1477 aa		11.16	□□□□□ -0.62
PCNX2-222	ENST00000520463	RGPD8	O14715	1765 aa	Predicted RBP	11.16	□□□□□ -0.62
PCNX2-222	ENST00000520463	PDE3B	Q13370	1112 aa		11.15	□□□□□ -0.62
PCNX2-222	ENST00000520463	SIRT1	Q96EB6	747 aa		11.15	□□□□□ -0.62
PCNX2-222	ENST00000520463	NRK	Q7Z2Y5	1582 aa		11.15	□□□□□ -0.62
PCNX2-222	ENST00000520463	PLEKHH1	Q9ULM0	1364 aa		11.15	□□□□□ -0.63
PCNX2-222	ENST00000520463	PLSCR1	O15162	318 aa		11.14	□□□□□ -0.63
PCNX2-222	ENST00000520463	BARGIN	Q6ZT62	677 aa		11.14	□□□□□ -0.63
PCNX2-222	ENST00000520463	STK26	Q9P289	416 aa		11.14	□□□□□ -0.63
PCNX2-222	ENST00000520463	CASZ1	Q86V15	1759 aa		11.13	□□□□□ -0.63
PCNX2-222	ENST00000520463	C11orf95	C9JLR9	678 aa	Predicted RBP	11.13	□□□□□ -0.63
PCNX2-222	ENST00000520463	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.13	□□□□□ -0.63
PCNX2-222	ENST00000520463	ATXN8OS	P0DMR3	200 aa		11.12	□□□□□ -0.63
PCNX2-222	ENST00000520463	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.12	□□□□□ -0.63
PCNX2-222	ENST00000520463	PPL	O60437	1756 aa		11.12	□□□□□ -0.63
PCNX2-222	ENST00000520463	ZBTB7A	O95365	584 aa		11.11	□□□□□ -0.63
PCNX2-222	ENST00000520463	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.11	□□□□□ -0.63
PCNX2-222	ENST00000520463	PRDM11	Q9NQV5	511 aa		11.11	□□□□□ -0.63
PCNX2-222	ENST00000520463	MYOM1	P52179	1685 aa		11.11	□□□□□ -0.63
PCNX2-222	ENST00000520463	KNDC1	Q76NI1	1749 aa		11.1	□□□□□ -0.63
PCNX2-222	ENST00000520463	PMFBP1	Q8TBY8	1022 aa		11.1	□□□□□ -0.63
PCNX2-222	ENST00000520463	SGIP1	Q9BQI5	828 aa		11.1	□□□□□ -0.63
PCNX2-222	ENST00000520463	ADGRF5	Q8IZF2	1346 aa		11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	RGPD4	Q7Z3J3	1758 aa		11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	ALS2	Q96Q42	1657 aa		11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	TMEM132E	Q6IEE7	984 aa		11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	AKT1S1	Q96B36	256 aa		11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	GOLGB1	Q14789	3259 aa	Known RBP	11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.09	□□□□□ -0.63
PCNX2-222	ENST00000520463	PROM2	Q8N271	834 aa		11.08	□□□□□ -0.64
PCNX2-222	ENST00000520463	STRN4	Q9NRL3	753 aa		11.08	□□□□□ -0.64
PCNX2-222	ENST00000520463	IFT172	Q9UG01	1749 aa		11.08	□□□□□ -0.64
PCNX2-222	ENST00000520463	CRYBG1	Q9Y4K1	1723 aa		11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	MAP3K5	Q99683	1374 aa		11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	LOC105371045	A0A1W2PR82	267 aa		11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	MTFR1L	Q9H019	292 aa		11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	ANKAR	Q7Z5J8	1434 aa		11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.07	□□□□□ -0.64
PCNX2-222	ENST00000520463	GPRASP1	Q5JY77	1395 aa		11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	KIAA0232	Q92628	1395 aa		11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	DLC1	Q96QB1	1528 aa		11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	TCP11L2	Q8N4U5	519 aa		11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	USP35	Q9P2H5	1018 aa		11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	THRAP3	Q9Y2W1	955 aa	Known RBP	11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	ACIN1	Q9UKV3	1341 aa	Known RBP	11.06	□□□□□ -0.64
PCNX2-222	ENST00000520463	CHRNA2	Q15822	529 aa		11.05	□□□□□ -0.64
PCNX2-222	ENST00000520463	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.05	□□□□□ -0.64
PCNX2-222	ENST00000520463	SSH2	Q76I76	1423 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	EVA1C	P58658	441 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	SLC15A2	Q16348	729 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	GPR162	Q16538	588 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	REM2	Q8IYK8	340 aa	Predicted RBP	11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	ARX	Q96QS3	562 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	SBF2	Q86WG5	1849 aa		11.04	□□□□□ -0.64
PCNX2-222	ENST00000520463	DHX57	Q6P158	1386 aa	Known RBP	11.03	□□□□□ -0.64
PCNX2-222	ENST00000520463	HSPA6	P17066	643 aa		11.03	□□□□□ -0.64
PCNX2-222	ENST00000520463	STK32B	Q9NY57	414 aa		11.03	□□□□□ -0.64
PCNX2-222	ENST00000520463	SHANK3	Q9BYB0	1731 aa		11.03	□□□□□ -0.64
PCNX2-222	ENST00000520463	ANKRD30B	Q9BXX2	1392 aa		11.03	□□□□□ -0.64
PCNX2-222	ENST00000520463	PEAK1	Q9H792	1746 aa		11.02	□□□□□ -0.65
PCNX2-222	ENST00000520463	ZC3H6	P61129	1189 aa	Known RBP	11.02	□□□□□ -0.65
PCNX2-222	ENST00000520463	LARP1	Q6PKG0	1096 aa	Known RBP	11.02	□□□□□ -0.65
PCNX2-222	ENST00000520463	OVOS2	A0A0G2JMS6	1433 aa		11.01	□□□□□ -0.65
PCNX2-222	ENST00000520463	OVOS2	A0A0J9YW53	1432 aa		11.01	□□□□□ -0.65
PCNX2-222	ENST00000520463	OVOS2	Q6IE36	1432 aa		11.01	□□□□□ -0.65
PCNX2-222	ENST00000520463	PARP4	Q9UKK3	1724 aa	Known RBP	11.01	□□□□□ -0.65
PCNX2-222	ENST00000520463	C14orf93	Q9H972	538 aa	Known RBP	11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms