RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
SKP1-207ENST00000520417 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
SKP1-207ENST00000520417 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
SKP1-207ENST00000520417 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
SKP1-207ENST00000520417 SH3BP2P78314 561 aa10.25□□□□□ -0.77
SKP1-207ENST00000520417 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
SKP1-207ENST00000520417 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
SKP1-207ENST00000520417 J3QL48 77 aa10.24□□□□□ -0.77
SKP1-207ENST00000520417 ST8SIA5O15466 376 aa10.24□□□□□ -0.77
SKP1-207ENST00000520417 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
SKP1-207ENST00000520417 AGERQ15109 404 aa10.22□□□□□ -0.77
SKP1-207ENST00000520417 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
SKP1-207ENST00000520417 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
SKP1-207ENST00000520417 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
SKP1-207ENST00000520417 SMPD1P17405 629 aa10.2□□□□□ -0.78
SKP1-207ENST00000520417 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
SKP1-207ENST00000520417 AXIN1O15169 862 aa10.19□□□□□ -0.78
SKP1-207ENST00000520417 BRPF1P55201 1214 aaPredicted RBP10.19□□□□□ -0.78
SKP1-207ENST00000520417 AAASQ9NRG9 546 aa10.19□□□□□ -0.78
SKP1-207ENST00000520417 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
SKP1-207ENST00000520417 AP1G2O75843 785 aa10.18□□□□□ -0.78
SKP1-207ENST00000520417 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
SKP1-207ENST00000520417 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
SKP1-207ENST00000520417 FOXJ1Q92949 421 aa10.17□□□□□ -0.78
SKP1-207ENST00000520417 HPS1Q92902 700 aa10.16□□□□□ -0.78
SKP1-207ENST00000520417 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
SKP1-207ENST00000520417 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
SKP1-207ENST00000520417 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.78
SKP1-207ENST00000520417 ARID5BQ14865 1188 aa10.15□□□□□ -0.78
SKP1-207ENST00000520417 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.78
SKP1-207ENST00000520417 SIAH2O43255 324 aa10.14□□□□□ -0.79
SKP1-207ENST00000520417 AVPP01185 164 aa10.14□□□□□ -0.79
SKP1-207ENST00000520417 ARMC2Q8NEN0 867 aa10.14□□□□□ -0.79
SKP1-207ENST00000520417 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
SKP1-207ENST00000520417 PRKCSHP14314 528 aaPredicted RBP10.13□□□□□ -0.79
SKP1-207ENST00000520417 CTC1Q2NKJ3 1217 aa10.13□□□□□ -0.79
SKP1-207ENST00000520417 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
SKP1-207ENST00000520417 POTECB2RU33 542 aa10.12□□□□□ -0.79
SKP1-207ENST00000520417 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
SKP1-207ENST00000520417 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
SKP1-207ENST00000520417 MAGEB6P1A0A0J9YX57 407 aa10.11□□□□□ -0.79
SKP1-207ENST00000520417 NR6A1Q15406 480 aa10.11□□□□□ -0.79
SKP1-207ENST00000520417 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
SKP1-207ENST00000520417 RFC5P40937 340 aa10.1□□□□□ -0.79
SKP1-207ENST00000520417 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
SKP1-207ENST00000520417 CARD14Q9BXL6 1004 aa10.1□□□□□ -0.79
SKP1-207ENST00000520417 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
SKP1-207ENST00000520417 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
SKP1-207ENST00000520417 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
SKP1-207ENST00000520417 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
SKP1-207ENST00000520417 GMPR2Q9P2T1 348 aaKnown RBP10.07□□□□□ -0.8
SKP1-207ENST00000520417 NNTQ13423 1086 aa10.06□□□□□ -0.8
SKP1-207ENST00000520417 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
SKP1-207ENST00000520417 C11orf95C9JLR9 678 aaPredicted RBP10.05□□□□□ -0.8
SKP1-207ENST00000520417 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
SKP1-207ENST00000520417 ATP13A2Q9NQ11 1180 aa10.05□□□□□ -0.8
SKP1-207ENST00000520417 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
SKP1-207ENST00000520417 ARHGAP9Q9BRR9 750 aa10.04□□□□□ -0.8
SKP1-207ENST00000520417 HMX1Q9NP08 348 aaPredicted RBP10.04□□□□□ -0.8
SKP1-207ENST00000520417 ADH1CP00326 375 aa10.03□□□□□ -0.8
SKP1-207ENST00000520417 VASH1Q7L8A9 365 aaPredicted RBP10.03□□□□□ -0.8
SKP1-207ENST00000520417 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
SKP1-207ENST00000520417 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.81
SKP1-207ENST00000520417 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
SKP1-207ENST00000520417 ZBTB33Q86T24 672 aa10.02□□□□□ -0.81
SKP1-207ENST00000520417 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
SKP1-207ENST00000520417 BMP1P13497 986 aa10.01□□□□□ -0.81
SKP1-207ENST00000520417 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
SKP1-207ENST00000520417 SH3RF1Q7Z6J0 888 aa10.01□□□□□ -0.81
SKP1-207ENST00000520417 MPNDQ8N594 471 aa10.01□□□□□ -0.81
SKP1-207ENST00000520417 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
SKP1-207ENST00000520417 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
SKP1-207ENST00000520417 CDK15Q96Q40 435 aa10□□□□□ -0.81
SKP1-207ENST00000520417 FSHRP23945 695 aa9.99□□□□□ -0.81
SKP1-207ENST00000520417 PTK2Q05397 1052 aa9.99□□□□□ -0.81
SKP1-207ENST00000520417 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
SKP1-207ENST00000520417 NR5A1Q13285 461 aa9.98□□□□□ -0.81
SKP1-207ENST00000520417 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
SKP1-207ENST00000520417 ZIC2O95409 532 aaPredicted RBP9.97□□□□□ -0.81
SKP1-207ENST00000520417 NR3C2P08235 984 aa9.97□□□□□ -0.81
SKP1-207ENST00000520417 GRM5P41594 1212 aa9.97□□□□□ -0.81
SKP1-207ENST00000520417 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
SKP1-207ENST00000520417 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
SKP1-207ENST00000520417 ZC3H4Q9UPT8 1303 aaKnown RBP9.97□□□□□ -0.81
SKP1-207ENST00000520417 SNRPBP14678 240 aaKnown RBP9.96□□□□□ -0.82
SKP1-207ENST00000520417 TIMP2P16035 220 aa9.96□□□□□ -0.82
SKP1-207ENST00000520417 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.82
SKP1-207ENST00000520417 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
SKP1-207ENST00000520417 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
SKP1-207ENST00000520417 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
SKP1-207ENST00000520417 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
SKP1-207ENST00000520417 KIFC2Q96AC6 838 aa9.94□□□□□ -0.82
SKP1-207ENST00000520417 RAB15P59190 212 aa9.93□□□□□ -0.82
SKP1-207ENST00000520417 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
SKP1-207ENST00000520417 TRIM34Q9BYJ4 488 aa9.93□□□□□ -0.82
SKP1-207ENST00000520417 MAP4K5Q9Y4K4 846 aa9.93□□□□□ -0.82
SKP1-207ENST00000520417 SCARF1Q14162 830 aa9.92□□□□□ -0.82
SKP1-207ENST00000520417 CCDC116Q8IYX3 515 aa9.92□□□□□ -0.82
SKP1-207ENST00000520417 PURBQ96QR8 312 aaKnown RBP9.92□□□□□ -0.82
SKP1-207ENST00000520417 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms